RNA–Protein interactions for RNA: ENST00000540408.5

COPS7A-211, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-211ENST00000540408 CDR2LQ86X02 465 aaPredicted RBP13.83□□□□□ -0.2
COPS7A-211ENST00000540408 CEP57Q86XR8 500 aa13.83□□□□□ -0.2
COPS7A-211ENST00000540408 C1orf210Q8IVY1 113 aa13.83□□□□□ -0.2
COPS7A-211ENST00000540408 ZBTB8OSQ8IWT0 167 aa13.83□□□□□ -0.2
COPS7A-211ENST00000540408 PRIMPOLQ96LW4 560 aa13.83□□□□□ -0.2
COPS7A-211ENST00000540408 HINFPQ9BQA5 517 aa13.83□□□□□ -0.2
COPS7A-211ENST00000540408 TTPALQ9BTX7 342 aa13.83□□□□□ -0.2
COPS7A-211ENST00000540408 POLR3FQ9H1D9 316 aaPredicted RBP13.83□□□□□ -0.2
COPS7A-211ENST00000540408 SLC2A4RGQ9NR83 387 aa13.83□□□□□ -0.2
COPS7A-211ENST00000540408 GJB4Q9NTQ9 266 aa13.83□□□□□ -0.2
COPS7A-211ENST00000540408 PRMT7Q9NVM4 692 aaPredicted RBP13.83□□□□□ -0.2
COPS7A-211ENST00000540408 ORC3Q9UBD5 711 aaPredicted RBP13.83□□□□□ -0.2
COPS7A-211ENST00000540408 NUMBLQ9Y6R0 609 aa13.83□□□□□ -0.2
COPS7A-211ENST00000540408 B4GALT5O43286 388 aa13.82□□□□□ -0.2
COPS7A-211ENST00000540408 PFKFB2O60825 505 aa13.82□□□□□ -0.2
COPS7A-211ENST00000540408 XYLBO75191 536 aa13.82□□□□□ -0.2
COPS7A-211ENST00000540408 THP07101 528 aa13.82□□□□□ -0.2
COPS7A-211ENST00000540408 HNRNPA1P09651 372 aaKnown RBP eCLIP13.82□□□□□ -0.2
COPS7A-211ENST00000540408 TXKP42681 527 aa13.82□□□□□ -0.2
COPS7A-211ENST00000540408 HTR4Q13639 388 aa13.82□□□□□ -0.2
COPS7A-211ENST00000540408 ANKRD1Q15327 319 aa13.82□□□□□ -0.2
COPS7A-211ENST00000540408 PRSS55Q6UWB4 352 aaPredicted RBP13.82□□□□□ -0.2
COPS7A-211ENST00000540408 MTSS1LQ765P7 747 aa13.82□□□□□ -0.2
COPS7A-211ENST00000540408 GRASPQ7Z6J2 395 aaPredicted RBP13.82□□□□□ -0.2
COPS7A-211ENST00000540408 GSTCDQ8NEC7 633 aa13.82□□□□□ -0.2
COPS7A-211ENST00000540408 MCPH1Q8NEM0 835 aa13.82□□□□□ -0.2
COPS7A-211ENST00000540408 PIGOQ8TEQ8 1089 aa13.82□□□□□ -0.2
COPS7A-211ENST00000540408 RABGGTAQ92696 567 aa13.82□□□□□ -0.2
COPS7A-211ENST00000540408 ADPGKQ9BRR6 497 aa13.82□□□□□ -0.2
COPS7A-211ENST00000540408 DAXXQ9UER7 740 aaPredicted RBP13.82□□□□□ -0.2
COPS7A-211ENST00000540408 CDH7Q9ULB5 785 aa13.82□□□□□ -0.2
COPS7A-211ENST00000540408 POLIQ9UNA4 740 aa13.82□□□□□ -0.2
COPS7A-211ENST00000540408 R4GN57 208 aa13.82□□□□□ -0.2
COPS7A-211ENST00000540408 TDRD15B5MCY1 1934 aaKnown RBP13.82□□□□□ -0.2
COPS7A-211ENST00000540408 RIF1Q5UIP0 2472 aaKnown RBP13.81□□□□□ -0.2
COPS7A-211ENST00000540408 N4BP3O15049 544 aa13.81□□□□□ -0.2
COPS7A-211ENST00000540408 NEMFO60524 1076 aa13.81□□□□□ -0.2
COPS7A-211ENST00000540408 USO1O60763 962 aaKnown RBP13.81□□□□□ -0.2
COPS7A-211ENST00000540408 ATP2B1P20020 1258 aa13.81□□□□□ -0.2
COPS7A-211ENST00000540408 NR5A1Q13285 461 aa13.81□□□□□ -0.2
COPS7A-211ENST00000540408 PSMD5Q16401 504 aa13.81□□□□□ -0.2
COPS7A-211ENST00000540408 EARS2Q5JPH6 523 aaKnown RBP13.81□□□□□ -0.2
COPS7A-211ENST00000540408 FAM171A1Q5VUB5 890 aa13.81□□□□□ -0.2
COPS7A-211ENST00000540408 PPP4R3CPQ6ZMV5 832 aa13.81□□□□□ -0.2
COPS7A-211ENST00000540408 MAEAQ7L5Y9 396 aa13.81□□□□□ -0.2
COPS7A-211ENST00000540408 PIK3R5Q8WYR1 880 aa13.81□□□□□ -0.2
COPS7A-211ENST00000540408 BORCS6Q96GS4 357 aa13.81□□□□□ -0.2
COPS7A-211ENST00000540408 C2orf40Q9H1Z8 148 aa13.81□□□□□ -0.2
COPS7A-211ENST00000540408 TPCN1Q9ULQ1 816 aa13.81□□□□□ -0.2
COPS7A-211ENST00000540408 FAM186AA6NE01 2351 aa13.81□□□□□ -0.2
COPS7A-211ENST00000540408 CASTOR2A6NHX0 329 aa13.8□□□□□ -0.2
COPS7A-211ENST00000540408 C8AP07357 584 aa13.8□□□□□ -0.2
COPS7A-211ENST00000540408 SP9P0CG40 484 aa13.8□□□□□ -0.2
COPS7A-211ENST00000540408 HOXA9P31269 272 aa13.8□□□□□ -0.2
COPS7A-211ENST00000540408 STARD6P59095 220 aa13.8□□□□□ -0.2
COPS7A-211ENST00000540408 PFKPQ01813 784 aa13.8□□□□□ -0.2
COPS7A-211ENST00000540408 TRIM29Q14134 588 aa13.8□□□□□ -0.2
COPS7A-211ENST00000540408 FAM187BQ17R55 369 aa13.8□□□□□ -0.2
COPS7A-211ENST00000540408 UVSSAQ2YD98 709 aa13.8□□□□□ -0.2
COPS7A-211ENST00000540408 RTP2Q5QGT7 225 aa13.8□□□□□ -0.2
COPS7A-211ENST00000540408 PJA1Q8NG27 643 aa13.8□□□□□ -0.2
COPS7A-211ENST00000540408 HASPINQ8TF76 798 aa13.8□□□□□ -0.2
COPS7A-211ENST00000540408 RUBCNQ92622 972 aa13.8□□□□□ -0.2
COPS7A-211ENST00000540408 CLSTN3Q9BQT9 956 aa13.8□□□□□ -0.2
COPS7A-211ENST00000540408 BCO2Q9BYV7 579 aa13.8□□□□□ -0.2
COPS7A-211ENST00000540408 SNTG2Q9NY99 539 aa13.8□□□□□ -0.2
COPS7A-211ENST00000540408 FBXW11Q9UKB1 542 aa13.8□□□□□ -0.2
COPS7A-211ENST00000540408 KANSL1LA0AUZ9 987 aa13.79□□□□□ -0.2
COPS7A-211ENST00000540408 FAM205CA6NFA0 338 aa13.79□□□□□ -0.2
COPS7A-211ENST00000540408 GPC5P78333 572 aa13.79□□□□□ -0.2
COPS7A-211ENST00000540408 PRKCQQ04759 706 aa13.79□□□□□ -0.2
COPS7A-211ENST00000540408 PRPF4BQ13523 1007 aaKnown RBP13.79□□□□□ -0.2
COPS7A-211ENST00000540408 SNW1Q13573 536 aaKnown RBP13.79□□□□□ -0.2
COPS7A-211ENST00000540408 MAPK6Q16659 721 aa13.79□□□□□ -0.2
COPS7A-211ENST00000540408 PARM1Q6UWI2 310 aa13.79□□□□□ -0.2
COPS7A-211ENST00000540408 RTL10Q7L3V2 364 aa13.79□□□□□ -0.2
COPS7A-211ENST00000540408 KIAA2013Q8IYS2 634 aa13.79□□□□□ -0.2
COPS7A-211ENST00000540408 LNX1Q8TBB1 728 aaPredicted RBP13.79□□□□□ -0.2
COPS7A-211ENST00000540408 FGF13Q92913 245 aa13.79□□□□□ -0.2
COPS7A-211ENST00000540408 FGF14Q92915 247 aa13.79□□□□□ -0.2
COPS7A-211ENST00000540408 NACC1Q96RE7 527 aa13.79□□□□□ -0.2
COPS7A-211ENST00000540408 PAAF1Q9BRP4 392 aa13.79□□□□□ -0.2
COPS7A-211ENST00000540408 FZD8Q9H461 694 aa13.79□□□□□ -0.2
COPS7A-211ENST00000540408 DLGAP2Q9P1A6 1054 aa13.79□□□□□ -0.2
COPS7A-211ENST00000540408 MTCL1Q9Y4B5 1905 aaKnown RBP13.79□□□□□ -0.2
COPS7A-211ENST00000540408 CCL16O15467 120 aa13.78□□□□□ -0.2
COPS7A-211ENST00000540408 LAMTOR5O43504 91 aa13.78□□□□□ -0.2
COPS7A-211ENST00000540408 TRAPPC3O43617 180 aa13.78□□□□□ -0.2
COPS7A-211ENST00000540408 KINO60870 393 aaKnown RBP13.78□□□□□ -0.2
COPS7A-211ENST00000540408 KIF4AO95239 1232 aa13.78□□□□□ -0.2
COPS7A-211ENST00000540408 CTDNEP1O95476 244 aa13.78□□□□□ -0.2
COPS7A-211ENST00000540408 PPP2R5AQ15172 486 aa13.78□□□□□ -0.2
COPS7A-211ENST00000540408 SLC44A4Q53GD3 710 aa13.78□□□□□ -0.2
COPS7A-211ENST00000540408 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.78□□□□□ -0.2
COPS7A-211ENST00000540408 DGLUCYQ7Z3D6 616 aa13.78□□□□□ -0.2
COPS7A-211ENST00000540408 APBB1IPQ7Z5R6 666 aaPredicted RBP13.78□□□□□ -0.2
COPS7A-211ENST00000540408 ST13P5Q8NFI4 369 aaPredicted RBP13.78□□□□□ -0.2
COPS7A-211ENST00000540408 ERMNQ8TAM6 284 aa13.78□□□□□ -0.2
COPS7A-211ENST00000540408 SLC7A14Q8TBB6 771 aa13.78□□□□□ -0.2
COPS7A-211ENST00000540408 TNFRSF25Q93038 417 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms