RNA–Protein interactions for RNA: ENST00000539982.5

CLSTN3-209, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-209ENST00000539982 SLKQ9H2G2 1235 aaPredicted RBP12.95□□□□□ -0.34
CLSTN3-209ENST00000539982 WRAP73Q9P2S5 460 aaPredicted RBP12.95□□□□□ -0.34
CLSTN3-209ENST00000539982 DDX25Q9UHL0 483 aaKnown RBP12.95□□□□□ -0.34
CLSTN3-209ENST00000539982 TDRD15B5MCY1 1934 aaKnown RBP12.95□□□□□ -0.34
CLSTN3-209ENST00000539982 INO80B-WBP1J3KQ70 363 aa12.94□□□□□ -0.34
CLSTN3-209ENST00000539982 M0R2N6 131 aa12.94□□□□□ -0.34
CLSTN3-209ENST00000539982 XYLBO75191 536 aa12.94□□□□□ -0.34
CLSTN3-209ENST00000539982 AKAP5P24588 427 aa12.94□□□□□ -0.34
CLSTN3-209ENST00000539982 YWHABP31946 246 aaKnown RBP12.94□□□□□ -0.34
CLSTN3-209ENST00000539982 RPS9P46781 194 aaKnown RBP12.94□□□□□ -0.34
CLSTN3-209ENST00000539982 EMC2Q15006 297 aa12.94□□□□□ -0.34
CLSTN3-209ENST00000539982 RTP2Q5QGT7 225 aa12.94□□□□□ -0.34
CLSTN3-209ENST00000539982 IFNLR1Q8IU57 520 aaPredicted RBP12.94□□□□□ -0.34
CLSTN3-209ENST00000539982 BLIDQ8IZY5 108 aa12.94□□□□□ -0.34
CLSTN3-209ENST00000539982 ITFG1Q8TB96 612 aa12.94□□□□□ -0.34
CLSTN3-209ENST00000539982 LNX1Q8TBB1 728 aaPredicted RBP12.94□□□□□ -0.34
CLSTN3-209ENST00000539982 RABGGTAQ92696 567 aa12.94□□□□□ -0.34
CLSTN3-209ENST00000539982 FAM20AQ96MK3 541 aa12.94□□□□□ -0.34
CLSTN3-209ENST00000539982 TTPALQ9BTX7 342 aa12.94□□□□□ -0.34
CLSTN3-209ENST00000539982 FAM126AQ9BYI3 521 aaPredicted RBP12.94□□□□□ -0.34
CLSTN3-209ENST00000539982 BMP2KQ9NSY1 1161 aaPredicted RBP12.94□□□□□ -0.34
CLSTN3-209ENST00000539982 VAV3Q9UKW4 847 aa12.94□□□□□ -0.34
CLSTN3-209ENST00000539982 USP18Q9UMW8 372 aa12.94□□□□□ -0.34
CLSTN3-209ENST00000539982 PATJQ8NI35 1801 aa12.94□□□□□ -0.34
CLSTN3-209ENST00000539982 SF3B1O75533 1304 aaKnown RBP eCLIP12.93□□□□□ -0.343e-9■■■■■ 206.8
CLSTN3-209ENST00000539982 COL4A3Q01955 1670 aa12.93□□□□□ -0.34
CLSTN3-209ENST00000539982 CCL16O15467 120 aa12.93□□□□□ -0.34
CLSTN3-209ENST00000539982 SLC37A4O43826 429 aa12.93□□□□□ -0.34
CLSTN3-209ENST00000539982 C8AP07357 584 aa12.93□□□□□ -0.34
CLSTN3-209ENST00000539982 ADRB1P08588 477 aa12.93□□□□□ -0.34
CLSTN3-209ENST00000539982 ARF4P18085 180 aaPredicted RBP12.93□□□□□ -0.34
CLSTN3-209ENST00000539982 TARSP26639 723 aaKnown RBP12.93□□□□□ -0.34
CLSTN3-209ENST00000539982 GRIK3Q13003 919 aa12.93□□□□□ -0.34
CLSTN3-209ENST00000539982 FZD5Q13467 585 aa12.93□□□□□ -0.34
CLSTN3-209ENST00000539982 TFDP1Q14186 410 aa12.93□□□□□ -0.34
CLSTN3-209ENST00000539982 HSP90AA2PQ14568 343 aaPredicted RBP12.93□□□□□ -0.34
CLSTN3-209ENST00000539982 EPHA7Q15375 998 aa12.93□□□□□ -0.34
CLSTN3-209ENST00000539982 AMHR2Q16671 573 aa12.93□□□□□ -0.34
CLSTN3-209ENST00000539982 ST3GAL2Q16842 350 aa12.93□□□□□ -0.34
CLSTN3-209ENST00000539982 UVSSAQ2YD98 709 aa12.93□□□□□ -0.34
CLSTN3-209ENST00000539982 XKR9Q5GH70 373 aa12.93□□□□□ -0.34
CLSTN3-209ENST00000539982 TSSK4Q6SA08 328 aa12.93□□□□□ -0.34
CLSTN3-209ENST00000539982 ZNF852Q6ZMS4 543 aa12.93□□□□□ -0.34
CLSTN3-209ENST00000539982 PIK3R5Q8WYR1 880 aa12.93□□□□□ -0.34
CLSTN3-209ENST00000539982 KCNB2Q92953 911 aa12.93□□□□□ -0.34
CLSTN3-209ENST00000539982 MTRQ99707 1265 aa12.93□□□□□ -0.34
CLSTN3-209ENST00000539982 KXD1Q9BQD3 176 aa12.93□□□□□ -0.34
CLSTN3-209ENST00000539982 NXF3Q9H4D5 531 aaKnown RBP12.93□□□□□ -0.34
CLSTN3-209ENST00000539982 PRMT8Q9NR22 394 aaPredicted RBP12.93□□□□□ -0.34
CLSTN3-209ENST00000539982 KCNH3Q9ULD8 1083 aa12.93□□□□□ -0.34
CLSTN3-209ENST00000539982 POLIQ9UNA4 740 aa12.93□□□□□ -0.34
CLSTN3-209ENST00000539982 MRPS17Q9Y2R5 130 aaKnown RBP12.93□□□□□ -0.34
CLSTN3-209ENST00000539982 ECI2O75521 394 aa12.92□□□□□ -0.34
CLSTN3-209ENST00000539982 POU2F2P09086 479 aa12.92□□□□□ -0.34
CLSTN3-209ENST00000539982 PDIA3P30101 505 aaKnown RBP12.92□□□□□ -0.34
CLSTN3-209ENST00000539982 CCT2P78371 535 aaKnown RBP12.92□□□□□ -0.34
CLSTN3-209ENST00000539982 MBTD1Q05BQ5 628 aa12.92□□□□□ -0.34
CLSTN3-209ENST00000539982 ADCY1Q08828 1119 aa12.92□□□□□ -0.34
CLSTN3-209ENST00000539982 TUSC3Q13454 348 aa12.92□□□□□ -0.34
CLSTN3-209ENST00000539982 PSMD5Q16401 504 aa12.92□□□□□ -0.34
CLSTN3-209ENST00000539982 FAM171A1Q5VUB5 890 aa12.92□□□□□ -0.34
CLSTN3-209ENST00000539982 GALNT17Q6IS24 598 aa12.92□□□□□ -0.34
CLSTN3-209ENST00000539982 SLC27A1Q6PCB7 646 aa12.92□□□□□ -0.34
CLSTN3-209ENST00000539982 BLOC1S2Q6QNY1 142 aa12.92□□□□□ -0.34
CLSTN3-209ENST00000539982 TPRG1Q6ZUI0 275 aa12.92□□□□□ -0.34
CLSTN3-209ENST00000539982 CEP57Q86XR8 500 aa12.92□□□□□ -0.34
CLSTN3-209ENST00000539982 TRIM22Q8IYM9 498 aa12.92□□□□□ -0.34
CLSTN3-209ENST00000539982 DAGLBQ8NCG7 672 aa12.92□□□□□ -0.34
CLSTN3-209ENST00000539982 JAKMIP1Q96N16 626 aaKnown RBP12.92□□□□□ -0.34
CLSTN3-209ENST00000539982 PAAF1Q9BRP4 392 aa12.92□□□□□ -0.34
CLSTN3-209ENST00000539982 LXNQ9BS40 222 aa12.92□□□□□ -0.34
CLSTN3-209ENST00000539982 AGXT2Q9BYV1 514 aa12.92□□□□□ -0.34
CLSTN3-209ENST00000539982 ZSWIM4Q9H7M6 989 aa12.92□□□□□ -0.34
CLSTN3-209ENST00000539982 KCNMB3Q9NPA1 279 aa12.92□□□□□ -0.34
CLSTN3-209ENST00000539982 PARD6AQ9NPB6 346 aa12.92□□□□□ -0.34
CLSTN3-209ENST00000539982 KLK14Q9P0G3 267 aa12.92□□□□□ -0.34
CLSTN3-209ENST00000539982 DNMT3BQ9UBC3 853 aaKnown RBP12.92□□□□□ -0.34
CLSTN3-209ENST00000539982 PARP2Q9UGN5 583 aa12.92□□□□□ -0.34
CLSTN3-209ENST00000539982 GMEB2Q9UKD1 530 aa12.92□□□□□ -0.34
CLSTN3-209ENST00000539982 ZMYM2Q9UBW7 1377 aa12.92□□□□□ -0.34
CLSTN3-209ENST00000539982 A0A1B0GUA9 196 aa12.91□□□□□ -0.34
CLSTN3-209ENST00000539982 ZBTB39O15060 712 aa12.91□□□□□ -0.34
CLSTN3-209ENST00000539982 NPTXRO95502 500 aa12.91□□□□□ -0.34
CLSTN3-209ENST00000539982 NRLP54845 237 aa12.91□□□□□ -0.34
CLSTN3-209ENST00000539982 EVCP57679 992 aa12.91□□□□□ -0.34
CLSTN3-209ENST00000539982 SSRP1Q08945 709 aaKnown RBP12.91□□□□□ -0.34
CLSTN3-209ENST00000539982 MTAPQ13126 283 aa12.91□□□□□ -0.34
CLSTN3-209ENST00000539982 RAB33AQ14088 237 aa12.91□□□□□ -0.34
CLSTN3-209ENST00000539982 NPY5RQ15761 445 aa12.91□□□□□ -0.34
CLSTN3-209ENST00000539982 INF2Q27J81 1249 aa12.91□□□□□ -0.34
CLSTN3-209ENST00000539982 PABPC1LQ4VXU2 614 aaKnown RBP12.91□□□□□ -0.34
CLSTN3-209ENST00000539982 BMP2KLQ5H9B9 411 aa12.91□□□□□ -0.34
CLSTN3-209ENST00000539982 AXDND1Q5T1B0 1012 aaPredicted RBP12.91□□□□□ -0.34
CLSTN3-209ENST00000539982 PDXDC1Q6P996 788 aa12.91□□□□□ -0.34
CLSTN3-209ENST00000539982 MAMSTRQ6ZN01 415 aa12.91□□□□□ -0.34
CLSTN3-209ENST00000539982 RTL10Q7L3V2 364 aa12.91□□□□□ -0.34
CLSTN3-209ENST00000539982 NPAS3Q8IXF0 933 aa12.91□□□□□ -0.34
CLSTN3-209ENST00000539982 FAM177A1Q8N128 213 aaPredicted RBP12.91□□□□□ -0.34
CLSTN3-209ENST00000539982 SLC7A14Q8TBB6 771 aa12.91□□□□□ -0.34
CLSTN3-209ENST00000539982 NFKBIZQ9BYH8 718 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms