RNA–Protein interactions for RNA: ENST00000539413.1

CIT-210, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-210ENST00000539413 LINC00301Q8NCQ3 95 aa17.2■□□□□ 0.34
CIT-210ENST00000539413 RABGGTAQ92696 567 aa17.2■□□□□ 0.34
CIT-210ENST00000539413 ZNF396Q96N95 335 aaPredicted RBP17.2■□□□□ 0.34
CIT-210ENST00000539413 KCNG1Q9UIX4 513 aa17.2■□□□□ 0.34
CIT-210ENST00000539413 TDRD15B5MCY1 1934 aaKnown RBP17.19■□□□□ 0.34
CIT-210ENST00000539413 ABLIM1O14639 778 aa17.19■□□□□ 0.34
CIT-210ENST00000539413 CLASP2O75122 1294 aaKnown RBP17.19■□□□□ 0.34
CIT-210ENST00000539413 NR1I2O75469 434 aa17.19■□□□□ 0.34
CIT-210ENST00000539413 FAM13AO94988 1023 aa17.19■□□□□ 0.34
CIT-210ENST00000539413 EFEMP2O95967 443 aa17.19■□□□□ 0.34
CIT-210ENST00000539413 PROZP22891 400 aa17.19■□□□□ 0.34
CIT-210ENST00000539413 TXLNAP40222 546 aa17.19■□□□□ 0.34
CIT-210ENST00000539413 ZNF131P52739 623 aa17.19■□□□□ 0.34
CIT-210ENST00000539413 OSTNP61366 133 aa17.19■□□□□ 0.34
CIT-210ENST00000539413 COASYQ13057 564 aa17.19■□□□□ 0.34
CIT-210ENST00000539413 TUSC3Q13454 348 aa17.19■□□□□ 0.34
CIT-210ENST00000539413 SMAD4Q13485 552 aaKnown RBP17.19■□□□□ 0.34
CIT-210ENST00000539413 PTPN14Q15678 1187 aa17.19■□□□□ 0.34
CIT-210ENST00000539413 RRAGBQ5VZM2 374 aa17.19■□□□□ 0.34
CIT-210ENST00000539413 TMEM184AQ6ZMB5 413 aa17.19■□□□□ 0.34
CIT-210ENST00000539413 TAS1R1Q7RTX1 841 aa17.19■□□□□ 0.34
CIT-210ENST00000539413 APBB1IPQ7Z5R6 666 aaPredicted RBP17.19■□□□□ 0.34
CIT-210ENST00000539413 MYCT1Q8N699 235 aa17.19■□□□□ 0.34
CIT-210ENST00000539413 ZBTB45Q96K62 511 aaPredicted RBP17.19■□□□□ 0.34
CIT-210ENST00000539413 PAAF1Q9BRP4 392 aa17.19■□□□□ 0.34
CIT-210ENST00000539413 TCHPQ9BT92 498 aa17.19■□□□□ 0.34
CIT-210ENST00000539413 COLEC11Q9BWP8 271 aa17.19■□□□□ 0.34
CIT-210ENST00000539413 ZHX3Q9H4I2 956 aa17.19■□□□□ 0.34
CIT-210ENST00000539413 CD320Q9NPF0 282 aa17.19■□□□□ 0.34
CIT-210ENST00000539413 STK17AQ9UEE5 414 aa17.19■□□□□ 0.34
CIT-210ENST00000539413 FAM50BQ9Y247 325 aa17.19■□□□□ 0.34
CIT-210ENST00000539413 HCFC2Q9Y5Z7 792 aa17.19■□□□□ 0.34
CIT-210ENST00000539413 IRAK3Q9Y616 596 aa17.19■□□□□ 0.34
CIT-210ENST00000539413 A0A087X0B3 334 aa17.18■□□□□ 0.34
CIT-210ENST00000539413 CASTOR2A6NHX0 329 aa17.18■□□□□ 0.34
CIT-210ENST00000539413 SPTLC2O15270 562 aa17.18■□□□□ 0.34
CIT-210ENST00000539413 SOD2P04179 222 aa17.18■□□□□ 0.34
CIT-210ENST00000539413 THP07101 528 aa17.18■□□□□ 0.34
CIT-210ENST00000539413 HARSP12081 509 aaKnown RBP17.18■□□□□ 0.34
CIT-210ENST00000539413 PDIA4P13667 645 aaKnown RBP17.18■□□□□ 0.34
CIT-210ENST00000539413 GRM5P41594 1212 aa17.18■□□□□ 0.34
CIT-210ENST00000539413 NAB2Q15742 525 aa17.18■□□□□ 0.34
CIT-210ENST00000539413 SMAD2Q15796 467 aaKnown RBP17.18■□□□□ 0.34
CIT-210ENST00000539413 GLRA4Q5JXX5 417 aa17.18■□□□□ 0.34
CIT-210ENST00000539413 MPZL3Q6UWV2 235 aa17.18■□□□□ 0.34
CIT-210ENST00000539413 HAUS6Q7Z4H7 955 aa17.18■□□□□ 0.34
CIT-210ENST00000539413 RNF168Q8IYW5 571 aaPredicted RBP17.18■□□□□ 0.34
CIT-210ENST00000539413 SMRP1Q8NCR6 262 aa17.18■□□□□ 0.34
CIT-210ENST00000539413 HERC2P3Q9BVR0 1158 aa17.18■□□□□ 0.34
CIT-210ENST00000539413 PANK2Q9BZ23 570 aa17.18■□□□□ 0.34
CIT-210ENST00000539413 PARVGQ9HBI0 331 aa17.18■□□□□ 0.34
CIT-210ENST00000539413 DAXXQ9UER7 740 aaPredicted RBP17.18■□□□□ 0.34
CIT-210ENST00000539413 STK39Q9UEW8 545 aa17.18■□□□□ 0.34
CIT-210ENST00000539413 MYO7AQ13402 2215 aa17.18■□□□□ 0.34
CIT-210ENST00000539413 H0YCG3 227 aa17.17■□□□□ 0.34
CIT-210ENST00000539413 K7ENM7 598 aa17.17■□□□□ 0.34
CIT-210ENST00000539413 TRAK2O60296 914 aa17.17■□□□□ 0.34
CIT-210ENST00000539413 PPP6R2O75170 966 aa17.17■□□□□ 0.34
CIT-210ENST00000539413 TBCAO75347 108 aaKnown RBP17.17■□□□□ 0.34
CIT-210ENST00000539413 TOM1L1O75674 476 aa17.17■□□□□ 0.34
CIT-210ENST00000539413 YEATS4O95619 227 aa17.17■□□□□ 0.34
CIT-210ENST00000539413 BRD1O95696 1058 aa17.17■□□□□ 0.34
CIT-210ENST00000539413 SRGAP2BP0DMP2 458 aa17.17■□□□□ 0.34
CIT-210ENST00000539413 MCF2P10911 925 aa17.17■□□□□ 0.34
CIT-210ENST00000539413 ANKRD54Q6NXT1 300 aa17.17■□□□□ 0.34
CIT-210ENST00000539413 ZPBP2Q6X784 338 aa17.17■□□□□ 0.34
CIT-210ENST00000539413 DYMQ7RTS9 669 aa17.17■□□□□ 0.34
CIT-210ENST00000539413 TMEM87AQ8NBN3 555 aa17.17■□□□□ 0.34
CIT-210ENST00000539413 FIZ1Q96SL8 496 aa17.17■□□□□ 0.34
CIT-210ENST00000539413 CCDC94Q9BW85 323 aaPredicted RBP17.17■□□□□ 0.34
CIT-210ENST00000539413 ANKFY1Q9P2R3 1169 aa17.17■□□□□ 0.34
CIT-210ENST00000539413 C2CD2LO14523 706 aa17.16■□□□□ 0.34
CIT-210ENST00000539413 LILRB3O75022 631 aa17.16■□□□□ 0.34
CIT-210ENST00000539413 URODP06132 367 aa17.16■□□□□ 0.34
CIT-210ENST00000539413 STAT6P42226 847 aa17.16■□□□□ 0.34
CIT-210ENST00000539413 YARSP54577 528 aaKnown RBP17.16■□□□□ 0.34
CIT-210ENST00000539413 HSP90AA2PQ14568 343 aaPredicted RBP17.16■□□□□ 0.34
CIT-210ENST00000539413 SEZ6Q53EL9 994 aa17.16■□□□□ 0.34
CIT-210ENST00000539413 FUT10Q6P4F1 479 aa17.16■□□□□ 0.34
CIT-210ENST00000539413 SYCE2Q6PIF2 218 aa17.16■□□□□ 0.34
CIT-210ENST00000539413 CCDC73Q6ZRK6 1079 aa17.16■□□□□ 0.34
CIT-210ENST00000539413 CASP10Q92851 521 aa17.16■□□□□ 0.34
CIT-210ENST00000539413 KCNN1Q92952 543 aa17.16■□□□□ 0.34
CIT-210ENST00000539413 B3GALT6Q96L58 329 aa17.16■□□□□ 0.34
CIT-210ENST00000539413 KLHL5Q96PQ7 755 aa17.16■□□□□ 0.34
CIT-210ENST00000539413 APOL5Q9BWW9 433 aa17.16■□□□□ 0.34
CIT-210ENST00000539413 GPR62Q9BZJ7 368 aa17.16■□□□□ 0.34
CIT-210ENST00000539413 HAPLN2Q9GZV7 340 aa17.16■□□□□ 0.34
CIT-210ENST00000539413 MRPL17Q9NRX2 175 aaKnown RBP17.16■□□□□ 0.34
CIT-210ENST00000539413 ADAM28Q9UKQ2 775 aa17.16■□□□□ 0.34
CIT-210ENST00000539413 TBX20Q9UMR3 447 aa17.16■□□□□ 0.34
CIT-210ENST00000539413 USP15Q9Y4E8 981 aaPredicted RBP17.16■□□□□ 0.34
CIT-210ENST00000539413 MYH11P35749 1972 aa17.15■□□□□ 0.34
CIT-210ENST00000539413 MYMKA6NI61 221 aa17.15■□□□□ 0.34
CIT-210ENST00000539413 TADA2AO75478 443 aa17.15■□□□□ 0.34
CIT-210ENST00000539413 KIF4AO95239 1232 aa17.15■□□□□ 0.34
CIT-210ENST00000539413 CNPP09543 421 aaKnown RBP17.15■□□□□ 0.34
CIT-210ENST00000539413 EPCAMP16422 314 aa17.15■□□□□ 0.34
CIT-210ENST00000539413 NMT1P30419 496 aaKnown RBP17.15■□□□□ 0.34
CIT-210ENST00000539413 GLUD2P49448 558 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms