RNA–Protein interactions for RNA: ENST00000539204.5

YBX3-207, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 649 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-207ENST00000539204 FAM160A2Q8N612 972 aaPredicted RBP13.46□□□□□ -0.25
YBX3-207ENST00000539204 EXOC6Q8TAG9 804 aa13.46□□□□□ -0.25
YBX3-207ENST00000539204 ING5Q8WYH8 240 aa13.46□□□□□ -0.25
YBX3-207ENST00000539204 IRF7Q92985 503 aa13.46□□□□□ -0.25
YBX3-207ENST00000539204 ELSPBP1Q96BH3 223 aa13.46□□□□□ -0.25
YBX3-207ENST00000539204 ZFP42Q96MM3 310 aa13.46□□□□□ -0.25
YBX3-207ENST00000539204 TTPALQ9BTX7 342 aa13.46□□□□□ -0.25
YBX3-207ENST00000539204 LSM14BQ9BX40 385 aaKnown RBP13.46□□□□□ -0.25
YBX3-207ENST00000539204 TEKT3Q9BXF9 490 aa13.46□□□□□ -0.25
YBX3-207ENST00000539204 UNC45AQ9H3U1 944 aa13.46□□□□□ -0.25
YBX3-207ENST00000539204 MINDY3Q9H8M7 445 aa13.46□□□□□ -0.25
YBX3-207ENST00000539204 HCFC1R1Q9NWW0 138 aa13.46□□□□□ -0.25
YBX3-207ENST00000539204 GIT1Q9Y2X7 761 aa13.46□□□□□ -0.25
YBX3-207ENST00000539204 AXIN1O15169 862 aa13.45□□□□□ -0.26
YBX3-207ENST00000539204 STBD1O95210 358 aa13.45□□□□□ -0.26
YBX3-207ENST00000539204 POU2F2P09086 479 aa13.45□□□□□ -0.26
YBX3-207ENST00000539204 FUT2Q10981 343 aa13.45□□□□□ -0.26
YBX3-207ENST00000539204 SF3A2Q15428 464 aaKnown RBP13.45□□□□□ -0.26
YBX3-207ENST00000539204 RTP2Q5QGT7 225 aa13.45□□□□□ -0.26
YBX3-207ENST00000539204 AXDND1Q5T1B0 1012 aaPredicted RBP13.45□□□□□ -0.26
YBX3-207ENST00000539204 LRCH2Q5VUJ6 765 aa13.45□□□□□ -0.26
YBX3-207ENST00000539204 SGMS1Q86VZ5 419 aa13.45□□□□□ -0.26
YBX3-207ENST00000539204 EXOC8Q8IYI6 725 aa13.45□□□□□ -0.26
YBX3-207ENST00000539204 REXO1Q8N1G1 1221 aaKnown RBP13.45□□□□□ -0.26
YBX3-207ENST00000539204 SPEM1Q8N4L4 309 aa13.45□□□□□ -0.26
YBX3-207ENST00000539204 RDM1Q8NG50 284 aa13.45□□□□□ -0.26
YBX3-207ENST00000539204 LNX1Q8TBB1 728 aaPredicted RBP13.45□□□□□ -0.26
YBX3-207ENST00000539204 SLC7A14Q8TBB6 771 aa13.45□□□□□ -0.26
YBX3-207ENST00000539204 PRPF31Q8WWY3 499 aaKnown RBP13.45□□□□□ -0.26
YBX3-207ENST00000539204 RABGGTAQ92696 567 aa13.45□□□□□ -0.26
YBX3-207ENST00000539204 LENG9Q96B70 501 aa13.45□□□□□ -0.26
YBX3-207ENST00000539204 TRMT61BQ9BVS5 477 aaKnown RBP13.45□□□□□ -0.26
YBX3-207ENST00000539204 EIF2AQ9BY44 585 aaKnown RBP13.45□□□□□ -0.26
YBX3-207ENST00000539204 LRRC2Q9BYS8 371 aa13.45□□□□□ -0.26
YBX3-207ENST00000539204 ARRDC1-AS1Q9H2J1 176 aa13.45□□□□□ -0.26
YBX3-207ENST00000539204 C6orf50Q9HD87 102 aa13.45□□□□□ -0.26
YBX3-207ENST00000539204 SF3B1O75533 1304 aaKnown RBP eCLIP13.44□□□□□ -0.26
YBX3-207ENST00000539204 ERLIN2O94905 339 aa13.44□□□□□ -0.26
YBX3-207ENST00000539204 CHRNB1P11230 501 aa13.44□□□□□ -0.26
YBX3-207ENST00000539204 CHMLP26374 656 aa13.44□□□□□ -0.26
YBX3-207ENST00000539204 AXLP30530 894 aa13.44□□□□□ -0.26
YBX3-207ENST00000539204 PSMD5Q16401 504 aa13.44□□□□□ -0.26
YBX3-207ENST00000539204 HEATR6Q6AI08 1181 aaKnown RBP13.44□□□□□ -0.26
YBX3-207ENST00000539204 RTL10Q7L3V2 364 aa13.44□□□□□ -0.26
YBX3-207ENST00000539204 HACE1Q8IYU2 909 aa13.44□□□□□ -0.26
YBX3-207ENST00000539204 SLC7A3Q8WY07 619 aa13.44□□□□□ -0.26
YBX3-207ENST00000539204 PIK3R5Q8WYR1 880 aa13.44□□□□□ -0.26
YBX3-207ENST00000539204 SLC5A5Q92911 643 aa13.44□□□□□ -0.26
YBX3-207ENST00000539204 CCDC136Q96JN2 1154 aa13.44□□□□□ -0.26
YBX3-207ENST00000539204 YTHDC1Q96MU7 727 aaKnown RBP13.44□□□□□ -0.26
YBX3-207ENST00000539204 APOL6Q9BWW8 343 aa13.44□□□□□ -0.26
YBX3-207ENST00000539204 ZMYND12Q9H0C1 365 aa13.44□□□□□ -0.26
YBX3-207ENST00000539204 ZFP14Q9HCL3 533 aa13.44□□□□□ -0.26
YBX3-207ENST00000539204 TRPV5Q9NQA5 729 aa13.44□□□□□ -0.26
YBX3-207ENST00000539204 RXFP3Q9NSD7 469 aa13.44□□□□□ -0.26
YBX3-207ENST00000539204 HES2Q9Y543 173 aa13.44□□□□□ -0.26
YBX3-207ENST00000539204 RBM8AQ9Y5S9 174 aaKnown RBP13.44□□□□□ -0.26
YBX3-207ENST00000539204 TMEM8BA6NDV4 472 aa13.43□□□□□ -0.26
YBX3-207ENST00000539204 ASAP2O43150 1006 aa13.43□□□□□ -0.26
YBX3-207ENST00000539204 GNA11P29992 359 aa13.43□□□□□ -0.26
YBX3-207ENST00000539204 LAMTOR4Q0VGL1 99 aa13.43□□□□□ -0.26
YBX3-207ENST00000539204 GRM2Q14416 872 aa13.43□□□□□ -0.26
YBX3-207ENST00000539204 HSP90AA2PQ14568 343 aaPredicted RBP13.43□□□□□ -0.26
YBX3-207ENST00000539204 PCBP1Q15365 356 aaKnown RBP eCLIP13.43□□□□□ -0.26
YBX3-207ENST00000539204 RTN1Q16799 776 aa13.43□□□□□ -0.26
YBX3-207ENST00000539204 FAM171A1Q5VUB5 890 aa13.43□□□□□ -0.26
YBX3-207ENST00000539204 NOTUMQ6P988 496 aa13.43□□□□□ -0.26
YBX3-207ENST00000539204 PDXDC1Q6P996 788 aa13.43□□□□□ -0.26
YBX3-207ENST00000539204 ANO5Q75V66 913 aa13.43□□□□□ -0.26
YBX3-207ENST00000539204 CCDC12Q8WUD4 166 aaPredicted RBP13.43□□□□□ -0.26
YBX3-207ENST00000539204 PSPC1Q8WXF1 523 aaKnown RBP13.43□□□□□ -0.26
YBX3-207ENST00000539204 CCDC51Q96ER9 411 aa13.43□□□□□ -0.26
YBX3-207ENST00000539204 LOXL4Q96JB6 756 aa13.43□□□□□ -0.26
YBX3-207ENST00000539204 TRIM6Q9C030 488 aaPredicted RBP13.43□□□□□ -0.26
YBX3-207ENST00000539204 ZNF334Q9HCZ1 680 aaPredicted RBP13.43□□□□□ -0.26
YBX3-207ENST00000539204 PIAS3Q9Y6X2 628 aa13.43□□□□□ -0.26
YBX3-207ENST00000539204 WDFY3Q8IZQ1 3526 aa13.43□□□□□ -0.26
YBX3-207ENST00000539204 SDK1Q7Z5N4 2213 aa13.43□□□□□ -0.26
YBX3-207ENST00000539204 ESYT2A0FGR8 921 aa13.42□□□□□ -0.26
YBX3-207ENST00000539204 SRRM3A6NNA2 597 aaPredicted RBP13.42□□□□□ -0.26
YBX3-207ENST00000539204 K7ESF4 209 aa13.42□□□□□ -0.26
YBX3-207ENST00000539204 ADAMTS3O15072 1205 aa13.42□□□□□ -0.26
YBX3-207ENST00000539204 SGSM2O43147 1006 aa13.42□□□□□ -0.26
YBX3-207ENST00000539204 PAPSS2O95340 614 aaPredicted RBP13.42□□□□□ -0.26
YBX3-207ENST00000539204 RHOP08100 348 aa13.42□□□□□ -0.26
YBX3-207ENST00000539204 PTPN2P17706 415 aa13.42□□□□□ -0.26
YBX3-207ENST00000539204 OR1D2P34982 312 aa13.42□□□□□ -0.26
YBX3-207ENST00000539204 USP11P51784 963 aa13.42□□□□□ -0.26
YBX3-207ENST00000539204 RAB33AQ14088 237 aa13.42□□□□□ -0.26
YBX3-207ENST00000539204 GAS6Q14393 721 aa13.42□□□□□ -0.26
YBX3-207ENST00000539204 CCDC6Q16204 474 aa13.42□□□□□ -0.26
YBX3-207ENST00000539204 PFKFB3Q16875 520 aaPredicted RBP13.42□□□□□ -0.26
YBX3-207ENST00000539204 PSAPL1Q6NUJ1 521 aa13.42□□□□□ -0.26
YBX3-207ENST00000539204 APOA5Q6Q788 366 aa13.42□□□□□ -0.26
YBX3-207ENST00000539204 GSTCDQ8NEC7 633 aa13.42□□□□□ -0.26
YBX3-207ENST00000539204 GJA10Q969M2 543 aa13.42□□□□□ -0.26
YBX3-207ENST00000539204 TMEM143Q96AN5 459 aa13.42□□□□□ -0.26
YBX3-207ENST00000539204 CSRNP2Q9H175 543 aa13.42□□□□□ -0.26
YBX3-207ENST00000539204 WDR81Q562E7 1941 aa13.41□□□□□ -0.26
YBX3-207ENST00000539204 ADAM12O43184 909 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms