RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 LGALS4P56470 323 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 CTXN1P60606 82 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 DSC2Q02487 901 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 KRTAP1-1Q07627 177 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 MESP2Q0VG99 397 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 DBPQ10586 325 aaPredicted RBP1.32□□□□□ -2.2
HIF1A-204ENST00000539097 SAFB2Q14151 953 aaKnown RBP eCLIP1.32□□□□□ -2.2
HIF1A-204ENST00000539097 NOLC1Q14978 699 aaKnown RBP eCLIP1.32□□□□□ -2.2
HIF1A-204ENST00000539097 KRT24Q2M2I5 525 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 COBLL1Q53SF7 1204 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 CD276Q5ZPR3 534 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 MFSD5Q6N075 450 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 ABHD15Q6UXT9 468 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 GPR155Q7Z3F1 870 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 RAB11FIP4Q86YS3 637 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 SP8Q8IXZ3 490 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 MAML2Q8IZL2 1156 aaPredicted RBP1.32□□□□□ -2.2
HIF1A-204ENST00000539097 NKAPQ8N5F7 415 aaKnown RBP1.32□□□□□ -2.2
HIF1A-204ENST00000539097 ANKS1AQ92625 1134 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 LENG9Q96B70 501 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 HSPBAP1Q96EW2 488 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 C22orf23Q9BZE7 217 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 KCTD10Q9H3F6 313 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 MTG2Q9H4K7 406 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 PPCSQ9HAB8 311 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 DNAJC28Q9NX36 388 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 GALNT8Q9NY28 637 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 SLAMF8Q9P0V8 285 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 CCDC39Q9UFE4 941 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 TMEM59LQ9UK28 342 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 L1RE1Q9UN81 338 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 PCDHA13Q9Y5I0 950 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 CDY2AQ9Y6F7 541 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 USP19O94966 1318 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 AOX1Q06278 1338 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 ARID4BQ4LE39 1312 aaPredicted RBP1.31□□□□□ -2.2
HIF1A-204ENST00000539097 ZNF335Q9H4Z2 1342 aaPredicted RBP1.31□□□□□ -2.2
HIF1A-204ENST00000539097 TDRD9Q8NDG6 1382 aaKnown RBP1.31□□□□□ -2.2
HIF1A-204ENST00000539097 A0A087WZ62 844 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 FAM234BA2RU67 622 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 MPOP05164 745 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 RNASE1P07998 156 aaKnown RBP1.31□□□□□ -2.2
HIF1A-204ENST00000539097 DBHP09172 617 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 MTHFD1P11586 935 aaKnown RBP1.31□□□□□ -2.2
HIF1A-204ENST00000539097 RHCEP18577 417 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 SLC6A4P31645 630 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 RPS19P39019 145 aaKnown RBP1.31□□□□□ -2.2
HIF1A-204ENST00000539097 ETV4P43268 484 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 IL13RA1P78552 427 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 RHDQ02161 417 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 PTH1RQ03431 593 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 KIAA2012Q0VF49 1180 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 PTK2BQ14289 1009 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 CSRP2Q16527 193 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 PRR31Q5SQ13 230 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 SP5Q6BEB4 398 aaPredicted RBP1.31□□□□□ -2.2
HIF1A-204ENST00000539097 RPTNQ6XPR3 784 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 BBS12Q6ZW61 710 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 RASGRP2Q7LDG7 609 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 PNPLA5Q7Z6Z6 429 aaPredicted RBP1.31□□□□□ -2.2
HIF1A-204ENST00000539097 GRAMD1CQ8IYS0 662 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 IFNL2Q8IZJ0 200 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 ADGRG2Q8IZP9 1017 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 POU5F2Q8N7G0 328 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 AMER2Q8N7J2 671 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 REPS2Q8NFH8 660 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 GPR156Q8NFN8 814 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 TRAPPC12Q8WVT3 735 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 MAML1Q92585 1016 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 PHKBQ93100 1093 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 NKD2Q969F2 451 aaPredicted RBP1.31□□□□□ -2.2
HIF1A-204ENST00000539097 RILPL2Q969X0 211 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 RSPRY1Q96DX4 576 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 FIZ1Q96SL8 496 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 OSBPL9Q96SU4 736 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 MYOCQ99972 504 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 ELAC2Q9BQ52 826 aaKnown RBP1.31□□□□□ -2.2
HIF1A-204ENST00000539097 PAAF1Q9BRP4 392 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 SGPP1Q9BX95 441 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 SLC6A15Q9H2J7 730 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 SERHL2Q9H4I8 314 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 MBNL3Q9NUK0 354 aaKnown RBP1.31□□□□□ -2.2
HIF1A-204ENST00000539097 MYOTQ9UBF9 498 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 SLC4A7Q9Y6M7 1214 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 COL15A1P39059 1388 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 PRSS29PA6NIE9 313 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 GOLGA8AA7E2F4 631 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 ZNF839A8K0R7 811 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 GOLGA8BA8MQT2 603 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 CYP26A1O43174 497 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 USP12O75317 370 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 ERN1O75460 977 aaKnown RBP1.31□□□□□ -2.2
HIF1A-204ENST00000539097 SNUPNO95149 360 aaKnown RBP1.31□□□□□ -2.2
HIF1A-204ENST00000539097 APOL3O95236 402 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 VIPR2P41587 438 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 ADAMTS20P59510 1910 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 AIMP2Q13155 320 aaKnown RBP1.31□□□□□ -2.2
HIF1A-204ENST00000539097 BIRC2Q13490 618 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 FGL2Q14314 439 aa1.31□□□□□ -2.2
HIF1A-204ENST00000539097 ACAP2Q15057 778 aa1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms