RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 CLTAP09496 248 aa16.73■□□□□ 0.27
VAMP1-207ENST00000539047 IQCF3P0C7M6 154 aa16.73■□□□□ 0.27
VAMP1-207ENST00000539047 TRIM49P0CI25 452 aa16.73■□□□□ 0.27
VAMP1-207ENST00000539047 TRIM49CP0CI26 452 aa16.73■□□□□ 0.27
VAMP1-207ENST00000539047 DLATP10515 647 aaKnown RBP16.73■□□□□ 0.27
VAMP1-207ENST00000539047 FGFR4P22455 802 aa16.73■□□□□ 0.27
VAMP1-207ENST00000539047 GTF2H1P32780 548 aa16.73■□□□□ 0.27
VAMP1-207ENST00000539047 FMO5P49326 533 aa16.73■□□□□ 0.27
VAMP1-207ENST00000539047 MXI1P50539 228 aa16.73■□□□□ 0.27
VAMP1-207ENST00000539047 AP3M2P53677 418 aa16.73■□□□□ 0.27
VAMP1-207ENST00000539047 YARSP54577 528 aaKnown RBP16.73■□□□□ 0.27
VAMP1-207ENST00000539047 POU5F1Q01860 360 aaKnown RBP16.73■□□□□ 0.27
VAMP1-207ENST00000539047 EEF1DP3Q658K8 133 aa16.73■□□□□ 0.27
VAMP1-207ENST00000539047 BRSK2Q8IWQ3 736 aa16.73■□□□□ 0.27
VAMP1-207ENST00000539047 THNSL1Q8IYQ7 743 aa16.73■□□□□ 0.27
VAMP1-207ENST00000539047 ZNF397Q8NF99 534 aaPredicted RBP16.73■□□□□ 0.27
VAMP1-207ENST00000539047 BORCS6Q96GS4 357 aa16.73■□□□□ 0.27
VAMP1-207ENST00000539047 CDHR5Q9HBB8 845 aa16.73■□□□□ 0.27
VAMP1-207ENST00000539047 PTPRHQ9HD43 1115 aa16.73■□□□□ 0.27
VAMP1-207ENST00000539047 SQORQ9Y6N5 450 aa16.73■□□□□ 0.27
VAMP1-207ENST00000539047 TTLL13PA6NNM8 815 aa16.72■□□□□ 0.27
VAMP1-207ENST00000539047 PQBP1O60828 265 aaKnown RBP16.72■□□□□ 0.27
VAMP1-207ENST00000539047 NPTXRO95502 500 aa16.72■□□□□ 0.27
VAMP1-207ENST00000539047 TNNI1P19237 187 aa16.72■□□□□ 0.27
VAMP1-207ENST00000539047 PBX1P40424 430 aa16.72■□□□□ 0.27
VAMP1-207ENST00000539047 MGAT3Q09327 533 aa16.72■□□□□ 0.27
VAMP1-207ENST00000539047 EXOC3L4Q17RC7 722 aa16.72■□□□□ 0.27
VAMP1-207ENST00000539047 TSR1Q2NL82 804 aaKnown RBP16.72■□□□□ 0.27
VAMP1-207ENST00000539047 FAM26DQ5JW98 314 aa16.72■□□□□ 0.27
VAMP1-207ENST00000539047 TWF2Q6IBS0 349 aaKnown RBP16.72■□□□□ 0.27
VAMP1-207ENST00000539047 CNGA4Q8IV77 575 aa16.72■□□□□ 0.27
VAMP1-207ENST00000539047 FAM126BQ8IXS8 530 aa16.72■□□□□ 0.27
VAMP1-207ENST00000539047 PARD3BQ8TEW8 1205 aa16.72■□□□□ 0.27
VAMP1-207ENST00000539047 CGRRF1Q99675 332 aa16.72■□□□□ 0.27
VAMP1-207ENST00000539047 C11orf49Q9H6J7 331 aa16.72■□□□□ 0.27
VAMP1-207ENST00000539047 CHST12Q9NRB3 414 aa16.72■□□□□ 0.27
VAMP1-207ENST00000539047 TOPORSQ9NS56 1045 aaPredicted RBP16.72■□□□□ 0.27
VAMP1-207ENST00000539047 GCNT4Q9P109 453 aa16.72■□□□□ 0.27
VAMP1-207ENST00000539047 PCDH10Q9P2E7 1040 aa16.72■□□□□ 0.27
VAMP1-207ENST00000539047 ABLIM1O14639 778 aa16.71■□□□□ 0.27
VAMP1-207ENST00000539047 CHRNA1P02708 482 aa16.71■□□□□ 0.27
VAMP1-207ENST00000539047 CKBP12277 381 aa16.71■□□□□ 0.27
VAMP1-207ENST00000539047 ZSCAN20P17040 1043 aaPredicted RBP16.71■□□□□ 0.27
VAMP1-207ENST00000539047 CDK7P50613 346 aa16.71■□□□□ 0.27
VAMP1-207ENST00000539047 RBL2Q08999 1139 aa16.71■□□□□ 0.27
VAMP1-207ENST00000539047 NFX1Q12986 1120 aaKnown RBP16.71■□□□□ 0.27
VAMP1-207ENST00000539047 KRT39Q6A163 491 aa16.71■□□□□ 0.27
VAMP1-207ENST00000539047 SLC39A5Q6ZMH5 540 aa16.71■□□□□ 0.27
VAMP1-207ENST00000539047 FAM43BQ6ZT52 329 aaPredicted RBP16.71■□□□□ 0.27
VAMP1-207ENST00000539047 FAM228AQ86W67 206 aa16.71■□□□□ 0.27
VAMP1-207ENST00000539047 CDR2LQ86X02 465 aaPredicted RBP16.71■□□□□ 0.27
VAMP1-207ENST00000539047 WDR49Q8IV35 697 aa16.71■□□□□ 0.27
VAMP1-207ENST00000539047 TMEM40Q8WWA1 233 aa16.71■□□□□ 0.27
VAMP1-207ENST00000539047 DHX38Q92620 1227 aaKnown RBP16.71■□□□□ 0.27
VAMP1-207ENST00000539047 WNT8BQ93098 351 aa16.71■□□□□ 0.27
VAMP1-207ENST00000539047 FAM212AQ96EL1 285 aa16.71■□□□□ 0.27
VAMP1-207ENST00000539047 ACAP3Q96P50 834 aa16.71■□□□□ 0.27
VAMP1-207ENST00000539047 HAPLN2Q9GZV7 340 aa16.71■□□□□ 0.27
VAMP1-207ENST00000539047 TMEM8AQ9HCN3 771 aa16.71■□□□□ 0.27
VAMP1-207ENST00000539047 CPSF3Q9UKF6 684 aaKnown RBP16.71■□□□□ 0.27
VAMP1-207ENST00000539047 NOC2LQ9Y3T9 749 aaKnown RBP16.71■□□□□ 0.27
VAMP1-207ENST00000539047 DAAM1Q9Y4D1 1078 aa16.71■□□□□ 0.27
VAMP1-207ENST00000539047 PDCD11Q14690 1871 aaKnown RBP16.7■□□□□ 0.26
VAMP1-207ENST00000539047 LRRIQ3A6PVS8 624 aaPredicted RBP16.7■□□□□ 0.26
VAMP1-207ENST00000539047 CLSTN1O94985 981 aa16.7■□□□□ 0.26
VAMP1-207ENST00000539047 TNNC2P02585 160 aa16.7■□□□□ 0.26
VAMP1-207ENST00000539047 STAG3L1P0CL83 205 aa16.7■□□□□ 0.26
VAMP1-207ENST00000539047 GHRP10912 638 aa16.7■□□□□ 0.26
VAMP1-207ENST00000539047 SELPP16109 830 aa16.7■□□□□ 0.26
VAMP1-207ENST00000539047 GRM5P41594 1212 aa16.7■□□□□ 0.26
VAMP1-207ENST00000539047 ATN1P54259 1190 aaPredicted RBP16.7■□□□□ 0.26
VAMP1-207ENST00000539047 OSTNP61366 133 aa16.7■□□□□ 0.26
VAMP1-207ENST00000539047 TRIM71Q2Q1W2 868 aaKnown RBP16.7■□□□□ 0.26
VAMP1-207ENST00000539047 FIGNQ5HY92 759 aa16.7■□□□□ 0.26
VAMP1-207ENST00000539047 FBXO47Q5MNV8 452 aa16.7■□□□□ 0.26
VAMP1-207ENST00000539047 ZNF618Q5T7W0 954 aa16.7■□□□□ 0.26
VAMP1-207ENST00000539047 LRRC8DQ7L1W4 858 aa16.7■□□□□ 0.26
VAMP1-207ENST00000539047 CCDC186Q7Z3E2 898 aa16.7■□□□□ 0.26
VAMP1-207ENST00000539047 CACNA2D4Q7Z3S7 1137 aa16.7■□□□□ 0.26
VAMP1-207ENST00000539047 CD302Q8IX05 232 aa16.7■□□□□ 0.26
VAMP1-207ENST00000539047 ZSWIM2Q8NEG5 633 aa16.7■□□□□ 0.26
VAMP1-207ENST00000539047 LSM14BQ9BX40 385 aaKnown RBP16.7■□□□□ 0.26
VAMP1-207ENST00000539047 ST3GAL5Q9UNP4 418 aa16.7■□□□□ 0.26
VAMP1-207ENST00000539047 AKR1B15C9JRZ8 316 aaPredicted RBP16.69■□□□□ 0.26
VAMP1-207ENST00000539047 PITPNM1O00562 1244 aa16.69■□□□□ 0.26
VAMP1-207ENST00000539047 PHACTR2O75167 634 aa16.69■□□□□ 0.26
VAMP1-207ENST00000539047 PARNO95453 639 aaKnown RBP16.69■□□□□ 0.26
VAMP1-207ENST00000539047 TMEM191BP0C7N4 346 aa16.69■□□□□ 0.26
VAMP1-207ENST00000539047 SKIP12755 728 aa16.69■□□□□ 0.26
VAMP1-207ENST00000539047 RFX1P22670 979 aa16.69■□□□□ 0.26
VAMP1-207ENST00000539047 TNFSF9P41273 254 aa16.69■□□□□ 0.26
VAMP1-207ENST00000539047 GCLMP48507 274 aa16.69■□□□□ 0.26
VAMP1-207ENST00000539047 RAB27AP51159 221 aa16.69■□□□□ 0.26
VAMP1-207ENST00000539047 BIRC3Q13489 604 aa16.69■□□□□ 0.26
VAMP1-207ENST00000539047 SEZ6Q53EL9 994 aa16.69■□□□□ 0.26
VAMP1-207ENST00000539047 HS1BP3Q53T59 392 aa16.69■□□□□ 0.26
VAMP1-207ENST00000539047 C1orf53Q5VUE5 145 aa16.69■□□□□ 0.26
VAMP1-207ENST00000539047 CRELD2Q6UXH1 353 aaPredicted RBP16.69■□□□□ 0.26
VAMP1-207ENST00000539047 ANKRD33Q7Z3H0 272 aa16.69■□□□□ 0.26
VAMP1-207ENST00000539047 NECAB2Q7Z6G3 386 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms