RNA–Protein interactions for RNA: ENST00000538909.1

CBX3P4-201, Transcript of chromobox 3 pseudogene 4, humanhuman

BASIC

Gene CBX3P4, Length 354 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-201ENST00000538909 ETFDHQ16134 617 aa2.83□□□□□ -1.96
CBX3P4-201ENST00000538909 SPDYE7PQ495Y7 208 aa2.83□□□□□ -1.96
CBX3P4-201ENST00000538909 UNQ6494/PRO21346Q6UXR6 183 aa2.83□□□□□ -1.96
CBX3P4-201ENST00000538909 ZNF517Q6ZMY9 492 aaPredicted RBP2.83□□□□□ -1.96
CBX3P4-201ENST00000538909 PTF1AQ7RTS3 328 aa2.83□□□□□ -1.96
CBX3P4-201ENST00000538909 TFAP2CQ92754 450 aa2.83□□□□□ -1.96
CBX3P4-201ENST00000538909 FERMT2Q96AC1 680 aa2.83□□□□□ -1.96
CBX3P4-201ENST00000538909 EXOC2Q96KP1 924 aa2.83□□□□□ -1.96
CBX3P4-201ENST00000538909 AIFM2Q9BRQ8 373 aa2.83□□□□□ -1.96
CBX3P4-201ENST00000538909 PITHD1Q9GZP4 211 aaPredicted RBP2.83□□□□□ -1.96
CBX3P4-201ENST00000538909 PCIF1Q9H4Z3 704 aa2.83□□□□□ -1.96
CBX3P4-201ENST00000538909 TBCCD1Q9NVR7 557 aa2.83□□□□□ -1.96
CBX3P4-201ENST00000538909 PFDN2Q9UHV9 154 aa2.83□□□□□ -1.96
CBX3P4-201ENST00000538909 NOX1Q9Y5S8 564 aa2.83□□□□□ -1.96
CBX3P4-201ENST00000538909 TNIKQ9UKE5 1360 aa2.83□□□□□ -1.96
CBX3P4-201ENST00000538909 MAPKBP1O60336 1514 aa2.83□□□□□ -1.96
CBX3P4-201ENST00000538909 ABCC2Q92887 1545 aa2.83□□□□□ -1.96
CBX3P4-201ENST00000538909 LOC101059915A0A1B0GWI6 518 aaPredicted RBP2.82□□□□□ -1.96
CBX3P4-201ENST00000538909 H3BNC9 293 aa2.82□□□□□ -1.96
CBX3P4-201ENST00000538909 NTN1O95631 604 aa2.82□□□□□ -1.96
CBX3P4-201ENST00000538909 CLEC2LP0C7M8 214 aa2.82□□□□□ -1.96
CBX3P4-201ENST00000538909 PTX3P26022 381 aaPredicted RBP2.82□□□□□ -1.96
CBX3P4-201ENST00000538909 MGAT1P26572 445 aa2.82□□□□□ -1.96
CBX3P4-201ENST00000538909 ITPKBP27987 946 aa2.82□□□□□ -1.96
CBX3P4-201ENST00000538909 CHN2P52757 468 aa2.82□□□□□ -1.96
CBX3P4-201ENST00000538909 KIAA1614Q5VZ46 1190 aa2.82□□□□□ -1.96
CBX3P4-201ENST00000538909 METRNLQ641Q3 311 aa2.82□□□□□ -1.96
CBX3P4-201ENST00000538909 ZNF626Q68DY1 528 aa2.82□□□□□ -1.96
CBX3P4-201ENST00000538909 C11orf87Q6NUJ2 197 aa2.82□□□□□ -1.96
CBX3P4-201ENST00000538909 ARMC6Q6NXE6 501 aa2.82□□□□□ -1.96
CBX3P4-201ENST00000538909 ABHD17CQ6PCB6 329 aa2.82□□□□□ -1.96
CBX3P4-201ENST00000538909 DRICH1Q6PGQ1 229 aaPredicted RBP2.82□□□□□ -1.96
CBX3P4-201ENST00000538909 TECPR1Q7Z6L1 1165 aa2.82□□□□□ -1.96
CBX3P4-201ENST00000538909 UNC5BQ8IZJ1 945 aa2.82□□□□□ -1.96
CBX3P4-201ENST00000538909 MSL3Q8N5Y2 521 aaKnown RBP2.82□□□□□ -1.96
CBX3P4-201ENST00000538909 VGLL2Q8N8G2 317 aa2.82□□□□□ -1.96
CBX3P4-201ENST00000538909 HIST1H2AHQ96KK5 128 aa2.82□□□□□ -1.96
CBX3P4-201ENST00000538909 MAGEB10Q96LZ2 347 aaPredicted RBP2.82□□□□□ -1.96
CBX3P4-201ENST00000538909 UROC1Q96N76 676 aa2.82□□□□□ -1.96
CBX3P4-201ENST00000538909 HIST1H2AJQ99878 128 aa2.82□□□□□ -1.96
CBX3P4-201ENST00000538909 MYL10Q9BUA6 226 aa2.82□□□□□ -1.96
CBX3P4-201ENST00000538909 PODXL2Q9NZ53 605 aa2.82□□□□□ -1.96
CBX3P4-201ENST00000538909 LRP12Q9Y561 859 aa2.82□□□□□ -1.96
CBX3P4-201ENST00000538909 ZMYM3Q14202 1370 aa2.82□□□□□ -1.96
CBX3P4-201ENST00000538909 PPRC1Q5VV67 1664 aaKnown RBP2.82□□□□□ -1.96
CBX3P4-201ENST00000538909 KIF13AQ9H1H9 1805 aa2.82□□□□□ -1.96
CBX3P4-201ENST00000538909 MAFGO15525 162 aa2.81□□□□□ -1.96
CBX3P4-201ENST00000538909 EIF5BO60841 1220 aaKnown RBP2.81□□□□□ -1.96
CBX3P4-201ENST00000538909 PRPF6O94906 941 aaKnown RBP2.81□□□□□ -1.96
CBX3P4-201ENST00000538909 PCDH8O95206 1070 aa2.81□□□□□ -1.96
CBX3P4-201ENST00000538909 LY86O95711 162 aa2.81□□□□□ -1.96
CBX3P4-201ENST00000538909 ELANEP08246 267 aa2.81□□□□□ -1.96
CBX3P4-201ENST00000538909 FGRP09769 529 aa2.81□□□□□ -1.96
CBX3P4-201ENST00000538909 GPD1P21695 349 aa2.81□□□□□ -1.96
CBX3P4-201ENST00000538909 APBA1Q02410 837 aa2.81□□□□□ -1.96
CBX3P4-201ENST00000538909 EIF2B5Q13144 721 aaKnown RBP2.81□□□□□ -1.96
CBX3P4-201ENST00000538909 MAPKAPK5Q8IW41 473 aa2.81□□□□□ -1.96
CBX3P4-201ENST00000538909 TMEM132CQ8N3T6 1108 aa2.81□□□□□ -1.96
CBX3P4-201ENST00000538909 C7orf31Q8N865 590 aa2.81□□□□□ -1.96
CBX3P4-201ENST00000538909 OR56A1Q8NGH5 318 aa2.81□□□□□ -1.96
CBX3P4-201ENST00000538909 ADAMTS15Q8TE58 950 aa2.81□□□□□ -1.96
CBX3P4-201ENST00000538909 HASPINQ8TF76 798 aa2.81□□□□□ -1.96
CBX3P4-201ENST00000538909 ZSWIM1Q9BR11 485 aa2.81□□□□□ -1.96
CBX3P4-201ENST00000538909 POFUT1Q9H488 388 aa2.81□□□□□ -1.96
CBX3P4-201ENST00000538909 ATP11BQ9Y2G3 1177 aa2.81□□□□□ -1.96
CBX3P4-201ENST00000538909 ZNF804BA4D1E1 1349 aa2.81□□□□□ -1.96
CBX3P4-201ENST00000538909 PRG4Q92954 1404 aaPredicted RBP2.81□□□□□ -1.96
CBX3P4-201ENST00000538909 NUP153P49790 1475 aaKnown RBP2.81□□□□□ -1.96
CBX3P4-201ENST00000538909 PCF11O94913 1555 aaKnown RBP2.81□□□□□ -1.96
CBX3P4-201ENST00000538909 RAPGEF6Q8TEU7 1601 aa2.81□□□□□ -1.96
CBX3P4-201ENST00000538909 CFAP43Q8NDM7 1665 aa2.8□□□□□ -1.96
CBX3P4-201ENST00000538909 ZCCHC11Q5TAX3 1644 aaKnown RBP2.8□□□□□ -1.96
CBX3P4-201ENST00000538909 GLI2P10070 1586 aa2.8□□□□□ -1.96
CBX3P4-201ENST00000538909 DIP2BQ9P265 1576 aa2.8□□□□□ -1.96
CBX3P4-201ENST00000538909 PLB1Q6P1J6 1458 aa2.8□□□□□ -1.96
CBX3P4-201ENST00000538909 KLF4O43474 513 aa2.8□□□□□ -1.96
CBX3P4-201ENST00000538909 PRKCGP05129 697 aa2.8□□□□□ -1.96
CBX3P4-201ENST00000538909 PRR35P0CG20 571 aa2.8□□□□□ -1.96
CBX3P4-201ENST00000538909 RBM25P49756 843 aaKnown RBP2.8□□□□□ -1.96
CBX3P4-201ENST00000538909 SSRP1Q08945 709 aaKnown RBP2.8□□□□□ -1.96
CBX3P4-201ENST00000538909 KRTAP27-1Q3LI81 207 aa2.8□□□□□ -1.96
CBX3P4-201ENST00000538909 TSTD2Q5T7W7 516 aa2.8□□□□□ -1.96
CBX3P4-201ENST00000538909 TSHZ3Q63HK5 1081 aa2.8□□□□□ -1.96
CBX3P4-201ENST00000538909 B3GNTL1Q67FW5 361 aaPredicted RBP2.8□□□□□ -1.96
CBX3P4-201ENST00000538909 TIGD7Q6NT04 549 aaPredicted RBP2.8□□□□□ -1.96
CBX3P4-201ENST00000538909 OTOP1Q7RTM1 612 aa2.8□□□□□ -1.96
CBX3P4-201ENST00000538909 KANSL1Q7Z3B3 1105 aa2.8□□□□□ -1.96
CBX3P4-201ENST00000538909 AMIGO2Q86SJ2 522 aa2.8□□□□□ -1.96
CBX3P4-201ENST00000538909 KIAA1958Q8N8K9 716 aa2.8□□□□□ -1.96
CBX3P4-201ENST00000538909 ZBTB38Q8NAP3 1195 aaPredicted RBP2.8□□□□□ -1.96
CBX3P4-201ENST00000538909 SCLYQ96I15 445 aa2.8□□□□□ -1.96
CBX3P4-201ENST00000538909 DHRS4Q9BTZ2 278 aa2.8□□□□□ -1.96
CBX3P4-201ENST00000538909 SLTMQ9NWH9 1034 aaKnown RBP eCLIP2.8□□□□□ -1.96
CBX3P4-201ENST00000538909 MTMR4Q9NYA4 1195 aa2.8□□□□□ -1.96
CBX3P4-201ENST00000538909 MRPS23Q9Y3D9 190 aaKnown RBP2.8□□□□□ -1.96
CBX3P4-201ENST00000538909 MAP3K1Q13233 1512 aa2.79□□□□□ -1.96
CBX3P4-201ENST00000538909 MAGI3Q5TCQ9 1506 aa2.79□□□□□ -1.96
CBX3P4-201ENST00000538909 FHOD3Q2V2M9 1422 aa2.79□□□□□ -1.96
CBX3P4-201ENST00000538909 CEP162Q5TB80 1403 aa2.79□□□□□ -1.96
CBX3P4-201ENST00000538909 UACAQ9BZF9 1416 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms