RNA–Protein interactions for RNA: ENST00000538596.6

CPNE8-203, Transcript of copine 8, humanhuman

TSL 1 (best) BASIC

Gene CPNE8, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-203ENST00000538596 MAPTP10636 758 aaKnown RBP12.84□□□□□ -0.35
CPNE8-203ENST00000538596 NCKAP1LP55160 1127 aa12.84□□□□□ -0.35
CPNE8-203ENST00000538596 PCNX4Q63HM2 1172 aa12.84□□□□□ -0.35
CPNE8-203ENST00000538596 LMBRD2Q68DH5 695 aaPredicted RBP12.84□□□□□ -0.35
CPNE8-203ENST00000538596 ANO5Q75V66 913 aa12.84□□□□□ -0.35
CPNE8-203ENST00000538596 CPLX4Q7Z7G2 160 aa12.84□□□□□ -0.35
CPNE8-203ENST00000538596 XPO6Q96QU8 1125 aaKnown RBP12.84□□□□□ -0.35
CPNE8-203ENST00000538596 SRRM3A6NNA2 597 aaPredicted RBP12.83□□□□□ -0.35
CPNE8-203ENST00000538596 FOXO6A8MYZ6 492 aa12.83□□□□□ -0.35
CPNE8-203ENST00000538596 GZMAP12544 262 aa12.83□□□□□ -0.35
CPNE8-203ENST00000538596 DRD4P21917 467 aa12.83□□□□□ -0.35
CPNE8-203ENST00000538596 DRG2P55039 364 aaKnown RBP12.83□□□□□ -0.35
CPNE8-203ENST00000538596 MFAP3P55082 362 aa12.83□□□□□ -0.35
CPNE8-203ENST00000538596 ACTN3Q08043 901 aaPredicted RBP12.83□□□□□ -0.35
CPNE8-203ENST00000538596 ALCAMQ13740 583 aa12.83□□□□□ -0.35
CPNE8-203ENST00000538596 PGM5Q15124 567 aa12.83□□□□□ -0.35
CPNE8-203ENST00000538596 KRT39Q6A163 491 aa12.83□□□□□ -0.35
CPNE8-203ENST00000538596 HOOK3Q86VS8 718 aa12.83□□□□□ -0.35
CPNE8-203ENST00000538596 ATG4AQ8WYN0 398 aa12.83□□□□□ -0.35
CPNE8-203ENST00000538596 WNK4Q96J92 1243 aa12.83□□□□□ -0.35
CPNE8-203ENST00000538596 HERPUD2Q9BSE4 406 aa12.83□□□□□ -0.35
CPNE8-203ENST00000538596 WNT8AQ9H1J5 351 aa12.83□□□□□ -0.35
CPNE8-203ENST00000538596 DEFB129Q9H1M3 183 aa12.83□□□□□ -0.35
CPNE8-203ENST00000538596 DNAJC17Q9NVM6 304 aaKnown RBP12.83□□□□□ -0.35
CPNE8-203ENST00000538596 STK32BQ9NY57 414 aa12.83□□□□□ -0.35
CPNE8-203ENST00000538596 RGS16O15492 202 aaPredicted RBP12.83□□□□□ -0.36
CPNE8-203ENST00000538596 CYP1A2P05177 515 aa12.83□□□□□ -0.36
CPNE8-203ENST00000538596 KRT5P13647 590 aa12.83□□□□□ -0.36
CPNE8-203ENST00000538596 SSTR3P32745 418 aaPredicted RBP12.83□□□□□ -0.36
CPNE8-203ENST00000538596 SP4Q02446 784 aa12.83□□□□□ -0.36
CPNE8-203ENST00000538596 TRIP13Q15645 432 aaPredicted RBP12.83□□□□□ -0.36
CPNE8-203ENST00000538596 ERMARDQ5T6L9 678 aa12.83□□□□□ -0.36
CPNE8-203ENST00000538596 CCDC121Q6ZUS5 278 aa12.83□□□□□ -0.36
CPNE8-203ENST00000538596 DDX1Q92499 740 aaKnown RBP12.83□□□□□ -0.36
CPNE8-203ENST00000538596 DDX23Q9BUQ8 820 aaKnown RBP12.83□□□□□ -0.36
CPNE8-203ENST00000538596 CCDC113Q9H0I3 377 aa12.83□□□□□ -0.36
CPNE8-203ENST00000538596 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.83□□□□□ -0.36
CPNE8-203ENST00000538596 GRIN3BO60391 1043 aa12.83□□□□□ -0.36
CPNE8-203ENST00000538596 ASNSP08243 561 aa12.83□□□□□ -0.36
CPNE8-203ENST00000538596 PDE6CP51160 858 aa12.83□□□□□ -0.36
CPNE8-203ENST00000538596 CDR2Q01850 454 aa12.83□□□□□ -0.36
CPNE8-203ENST00000538596 TCEAL1Q15170 157 aa12.83□□□□□ -0.36
CPNE8-203ENST00000538596 RNF207Q6ZRF8 634 aa12.83□□□□□ -0.36
CPNE8-203ENST00000538596 TEX2Q8IWB9 1127 aa12.83□□□□□ -0.36
CPNE8-203ENST00000538596 RMDN3Q96TC7 470 aa12.83□□□□□ -0.36
CPNE8-203ENST00000538596 TCEAL9Q9UHQ7 104 aa12.83□□□□□ -0.36
CPNE8-203ENST00000538596 ADGRA3Q8IWK6 1321 aa12.82□□□□□ -0.36
CPNE8-203ENST00000538596 GOLGA6L7A0A1B0GV03 622 aa12.82□□□□□ -0.36
CPNE8-203ENST00000538596 TP73O15350 636 aa12.82□□□□□ -0.36
CPNE8-203ENST00000538596 RIPK2O43353 540 aa12.82□□□□□ -0.36
CPNE8-203ENST00000538596 MTA2O94776 668 aa12.82□□□□□ -0.36
CPNE8-203ENST00000538596 GTF2A1P52655 376 aaPredicted RBP12.82□□□□□ -0.36
CPNE8-203ENST00000538596 PSMC5P62195 406 aa12.82□□□□□ -0.36
CPNE8-203ENST00000538596 SV2AQ7L0J3 742 aa12.82□□□□□ -0.36
CPNE8-203ENST00000538596 C4orf19Q8IY42 314 aa12.82□□□□□ -0.36
CPNE8-203ENST00000538596 CACNA2D3Q8IZS8 1091 aa12.82□□□□□ -0.36
CPNE8-203ENST00000538596 POMGNT1Q8WZA1 660 aa12.82□□□□□ -0.36
CPNE8-203ENST00000538596 FAM118BQ9BPY3 351 aa12.82□□□□□ -0.36
CPNE8-203ENST00000538596 JPH2Q9BR39 696 aaPredicted RBP12.82□□□□□ -0.36
CPNE8-203ENST00000538596 FAM129AQ9BZQ8 928 aa12.82□□□□□ -0.36
CPNE8-203ENST00000538596 CHST7Q9NS84 486 aa12.82□□□□□ -0.36
CPNE8-203ENST00000538596 RAB20Q9NX57 234 aa12.82□□□□□ -0.36
CPNE8-203ENST00000538596 PGAP2Q9UHJ9 254 aa12.82□□□□□ -0.36
CPNE8-203ENST00000538596 GTF3C4Q9UKN8 822 aa12.82□□□□□ -0.36
CPNE8-203ENST00000538596 C5orf60A6NFR6 353 aa12.82□□□□□ -0.36
CPNE8-203ENST00000538596 PODXLO00592 558 aa12.82□□□□□ -0.36
CPNE8-203ENST00000538596 TBC1D12O60347 775 aa12.82□□□□□ -0.36
CPNE8-203ENST00000538596 MMP13P45452 471 aa12.82□□□□□ -0.36
CPNE8-203ENST00000538596 IFNAR2P48551 515 aa12.82□□□□□ -0.36
CPNE8-203ENST00000538596 MNAT1P51948 309 aa12.82□□□□□ -0.36
CPNE8-203ENST00000538596 RWDD2BP57060 319 aa12.82□□□□□ -0.36
CPNE8-203ENST00000538596 PPP1R7Q15435 360 aa12.82□□□□□ -0.36
CPNE8-203ENST00000538596 OTUD6AQ7L8S5 288 aa12.82□□□□□ -0.36
CPNE8-203ENST00000538596 FBXL13Q8NEE6 735 aa12.82□□□□□ -0.36
CPNE8-203ENST00000538596 SUPT20HQ8NEM7 779 aa12.82□□□□□ -0.36
CPNE8-203ENST00000538596 TMEM174Q8WUU8 243 aa12.82□□□□□ -0.36
CPNE8-203ENST00000538596 ATXN2LQ8WWM7 1075 aaKnown RBP12.82□□□□□ -0.36
CPNE8-203ENST00000538596 PSPC1Q8WXF1 523 aaKnown RBP12.82□□□□□ -0.36
CPNE8-203ENST00000538596 CPA5Q8WXQ8 436 aa12.82□□□□□ -0.36
CPNE8-203ENST00000538596 ART4Q93070 314 aa12.82□□□□□ -0.36
CPNE8-203ENST00000538596 CHMP6Q96FZ7 201 aa12.82□□□□□ -0.36
CPNE8-203ENST00000538596 PGM2Q96G03 612 aa12.82□□□□□ -0.36
CPNE8-203ENST00000538596 NT5C1BQ96P26 610 aa12.82□□□□□ -0.36
CPNE8-203ENST00000538596 ST6GALNAC4Q9H4F1 302 aa12.82□□□□□ -0.36
CPNE8-203ENST00000538596 KMT5AQ9NQR1 393 aa12.82□□□□□ -0.36
CPNE8-203ENST00000538596 TBC1D22BQ9NU19 505 aa12.82□□□□□ -0.36
CPNE8-203ENST00000538596 MTRF1LQ9UGC7 380 aaKnown RBP12.82□□□□□ -0.36
CPNE8-203ENST00000538596 ANAPC7Q9UJX3 599 aa12.82□□□□□ -0.36
CPNE8-203ENST00000538596 O00370 1275 aa12.81□□□□□ -0.36
CPNE8-203ENST00000538596 LYPLA2O95372 231 aa12.81□□□□□ -0.36
CPNE8-203ENST00000538596 ACSL3O95573 720 aa12.81□□□□□ -0.36
CPNE8-203ENST00000538596 HSPA6P17066 643 aa12.81□□□□□ -0.36
CPNE8-203ENST00000538596 DMP1Q13316 513 aaPredicted RBP12.81□□□□□ -0.36
CPNE8-203ENST00000538596 CYP1B1Q16678 543 aa12.81□□□□□ -0.36
CPNE8-203ENST00000538596 LONRF1Q17RB8 773 aa12.81□□□□□ -0.36
CPNE8-203ENST00000538596 SPDYCQ5MJ68 293 aa12.81□□□□□ -0.36
CPNE8-203ENST00000538596 GKAP1Q5VSY0 366 aaPredicted RBP12.81□□□□□ -0.36
CPNE8-203ENST00000538596 NIPA1Q7RTP0 329 aa12.81□□□□□ -0.36
CPNE8-203ENST00000538596 MCF2L2Q86YR7 1114 aa12.81□□□□□ -0.36
CPNE8-203ENST00000538596 MAP4K3Q8IVH8 894 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms