RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 GRID2IPA4D2P6 1211 aa17.79■□□□□ 0.44
SCARB1-205ENST00000538291 CTSHP09668 335 aa17.79■□□□□ 0.44
SCARB1-205ENST00000538291 TMEM259Q4ZIN3 620 aa17.79■□□□□ 0.44
SCARB1-205ENST00000538291 RFFLQ8WZ73 363 aa17.79■□□□□ 0.44
SCARB1-205ENST00000538291 LRRC37BQ96QE4 947 aa17.79■□□□□ 0.44
SCARB1-205ENST00000538291 NEUROG2Q9H2A3 272 aa17.79■□□□□ 0.44
SCARB1-205ENST00000538291 FOXO4P98177 505 aa17.79■□□□□ 0.44
SCARB1-205ENST00000538291 ZBED8Q8IZ13 594 aa17.79■□□□□ 0.44
SCARB1-205ENST00000538291 TRIML2Q8N7C3 387 aa17.79■□□□□ 0.44
SCARB1-205ENST00000538291 THOC1Q96FV9 657 aaKnown RBP17.79■□□□□ 0.44
SCARB1-205ENST00000538291 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.79■□□□□ 0.44
SCARB1-205ENST00000538291 EHD2Q9NZN4 543 aa17.79■□□□□ 0.44
SCARB1-205ENST00000538291 SYNDIG1LA6NDD5 238 aa17.78■□□□□ 0.44
SCARB1-205ENST00000538291 FAM187AA6NFU0 413 aa17.78■□□□□ 0.44
SCARB1-205ENST00000538291 ACTR2P61160 394 aa17.78■□□□□ 0.44
SCARB1-205ENST00000538291 TBC1D19Q8N5T2 526 aa17.78■□□□□ 0.44
SCARB1-205ENST00000538291 CYTH2Q99418 400 aa17.78■□□□□ 0.44
SCARB1-205ENST00000538291 TYK2P29597 1187 aa17.78■□□□□ 0.44
SCARB1-205ENST00000538291 SNF8Q96H20 258 aa17.78■□□□□ 0.44
SCARB1-205ENST00000538291 CAPN11Q9UMQ6 739 aa17.78■□□□□ 0.44
SCARB1-205ENST00000538291 SNX9Q9Y5X1 595 aa17.78■□□□□ 0.44
SCARB1-205ENST00000538291 ASMTLO95671 621 aa17.78■□□□□ 0.44
SCARB1-205ENST00000538291 SULT1E1P49888 294 aa17.78■□□□□ 0.44
SCARB1-205ENST00000538291 ZNF543Q08ER8 600 aa17.78■□□□□ 0.44
SCARB1-205ENST00000538291 GTF2H3Q13889 308 aa17.78■□□□□ 0.44
SCARB1-205ENST00000538291 EFTUD2Q15029 972 aaKnown RBP eCLIP17.78■□□□□ 0.444e-7■■■■□ 26.1
SCARB1-205ENST00000538291 FASTKD1Q53R41 847 aaKnown RBP17.78■□□□□ 0.44
SCARB1-205ENST00000538291 TBC1D1Q86TI0 1168 aaPredicted RBP17.78■□□□□ 0.44
SCARB1-205ENST00000538291 GOLPH3LQ9H4A5 285 aa17.78■□□□□ 0.44
SCARB1-205ENST00000538291 TADA3O75528 432 aa17.78■□□□□ 0.44
SCARB1-205ENST00000538291 LMBRD2Q68DH5 695 aaPredicted RBP17.78■□□□□ 0.44
SCARB1-205ENST00000538291 C18orf8Q96DM3 657 aa17.78■□□□□ 0.44
SCARB1-205ENST00000538291 CHCHD3Q9NX63 227 aaKnown RBP17.78■□□□□ 0.44
SCARB1-205ENST00000538291 RGL1Q9NZL6 768 aa17.78■□□□□ 0.44
SCARB1-205ENST00000538291 TSPOAP1O95153 1857 aa17.77■□□□□ 0.44
SCARB1-205ENST00000538291 NMT1P30419 496 aaKnown RBP17.77■□□□□ 0.44
SCARB1-205ENST00000538291 AARSP49588 968 aaKnown RBP eCLIP17.77■□□□□ 0.444e-6■■■■■ 30.6
SCARB1-205ENST00000538291 SNX17Q15036 470 aa17.77■□□□□ 0.44
SCARB1-205ENST00000538291 RNF135Q8IUD6 432 aa17.77■□□□□ 0.44
SCARB1-205ENST00000538291 NYAP2Q9P242 653 aa17.77■□□□□ 0.44
SCARB1-205ENST00000538291 TSR3Q9UJK0 312 aaKnown RBP17.77■□□□□ 0.44
SCARB1-205ENST00000538291 AP3B1O00203 1094 aa17.77■□□□□ 0.44
SCARB1-205ENST00000538291 KITP10721 976 aa17.77■□□□□ 0.44
SCARB1-205ENST00000538291 KCNA2P16389 499 aa17.77■□□□□ 0.44
SCARB1-205ENST00000538291 ANKS3Q6ZW76 656 aa17.77■□□□□ 0.44
SCARB1-205ENST00000538291 NDUFB10O96000 172 aa17.77■□□□□ 0.44
SCARB1-205ENST00000538291 GUCY2CP25092 1073 aa17.77■□□□□ 0.44
SCARB1-205ENST00000538291 PEX19P40855 299 aa17.77■□□□□ 0.44
SCARB1-205ENST00000538291 RBBP7Q16576 425 aa17.77■□□□□ 0.44
SCARB1-205ENST00000538291 ANKRD40Q6AI12 368 aa17.77■□□□□ 0.44
SCARB1-205ENST00000538291 OSBPL9Q96SU4 736 aa17.77■□□□□ 0.44
SCARB1-205ENST00000538291 AGPAT1Q99943 283 aa17.77■□□□□ 0.44
SCARB1-205ENST00000538291 A2ML1A8K2U0 1454 aa17.77■□□□□ 0.43
SCARB1-205ENST00000538291 KDM6AO15550 1401 aaPredicted RBP17.77■□□□□ 0.43
SCARB1-205ENST00000538291 CFAP69A5D8W1 941 aa17.77■□□□□ 0.43
SCARB1-205ENST00000538291 SLC16A3O15427 465 aaKnown RBP17.77■□□□□ 0.43
SCARB1-205ENST00000538291 PRPF4O43172 522 aaKnown RBP eCLIP17.77■□□□□ 0.436e-7■■□□□ 12.4
SCARB1-205ENST00000538291 DIAPH2O60879 1101 aa17.77■□□□□ 0.43
SCARB1-205ENST00000538291 ATP5HO75947 161 aa17.77■□□□□ 0.43
SCARB1-205ENST00000538291 TMEM132DQ14C87 1099 aa17.77■□□□□ 0.43
SCARB1-205ENST00000538291 WDR35Q9P2L0 1181 aa17.77■□□□□ 0.43
SCARB1-205ENST00000538291 ZNF70Q9UC06 446 aaPredicted RBP17.77■□□□□ 0.43
SCARB1-205ENST00000538291 CCDC195A0A1B0GUA6 201 aa17.76■□□□□ 0.43
SCARB1-205ENST00000538291 LMNAP02545 664 aaKnown RBP17.76■□□□□ 0.43
SCARB1-205ENST00000538291 CYP2B6P20813 491 aa17.76■□□□□ 0.43
SCARB1-205ENST00000538291 SLC1A1P43005 524 aa17.76■□□□□ 0.43
SCARB1-205ENST00000538291 ZNF467Q7Z7K2 595 aaPredicted RBP17.76■□□□□ 0.43
SCARB1-205ENST00000538291 ZC3H18Q86VM9 953 aaKnown RBP17.76■□□□□ 0.43
SCARB1-205ENST00000538291 NR1H4Q96RI1 486 aaPredicted RBP17.76■□□□□ 0.43
SCARB1-205ENST00000538291 TET3O43151 1660 aa17.76■□□□□ 0.43
SCARB1-205ENST00000538291 FLT1P17948 1338 aa17.76■□□□□ 0.43
SCARB1-205ENST00000538291 ATP9BO43861 1147 aa17.76■□□□□ 0.43
SCARB1-205ENST00000538291 SLC25A27O95847 323 aa17.76■□□□□ 0.43
SCARB1-205ENST00000538291 NR3C2P08235 984 aa17.76■□□□□ 0.43
SCARB1-205ENST00000538291 CCDC137Q6PK04 289 aaKnown RBP17.76■□□□□ 0.43
SCARB1-205ENST00000538291 NUDCD3Q8IVD9 361 aa17.76■□□□□ 0.43
SCARB1-205ENST00000538291 PPHLN1Q8NEY8 458 aaKnown RBP17.76■□□□□ 0.43
SCARB1-205ENST00000538291 TMEM143Q96AN5 459 aa17.76■□□□□ 0.43
SCARB1-205ENST00000538291 KDM4CQ9H3R0 1056 aa17.76■□□□□ 0.43
SCARB1-205ENST00000538291 ZFP69BQ9UJL9 534 aa17.76■□□□□ 0.43
SCARB1-205ENST00000538291 PRDM15P57071 1507 aaPredicted RBP17.76■□□□□ 0.43
SCARB1-205ENST00000538291 KCNB1Q14721 858 aa17.76■□□□□ 0.43
SCARB1-205ENST00000538291 ANGEL2Q5VTE6 544 aaKnown RBP17.76■□□□□ 0.43
SCARB1-205ENST00000538291 DDX47Q9H0S4 455 aaKnown RBP17.76■□□□□ 0.43
SCARB1-205ENST00000538291 ING2Q9H160 280 aa17.76■□□□□ 0.43
SCARB1-205ENST00000538291 HSPBP1Q9NZL4 362 aa17.76■□□□□ 0.43
SCARB1-205ENST00000538291 CYP26A1O43174 497 aa17.76■□□□□ 0.43
SCARB1-205ENST00000538291 IZUMO3Q5VZ72 239 aa17.76■□□□□ 0.43
SCARB1-205ENST00000538291 PRR5LQ6MZQ0 368 aa17.76■□□□□ 0.43
SCARB1-205ENST00000538291 RRM2BQ7LG56 351 aa17.76■□□□□ 0.43
SCARB1-205ENST00000538291 SRBD1Q8N5C6 995 aaKnown RBP17.76■□□□□ 0.43
SCARB1-205ENST00000538291 MED15Q96RN5 788 aa17.76■□□□□ 0.43
SCARB1-205ENST00000538291 TSSK1BQ9BXA7 367 aa17.76■□□□□ 0.43
SCARB1-205ENST00000538291 SLC38A7Q9NVC3 462 aa17.76■□□□□ 0.43
SCARB1-205ENST00000538291 A0A1W2PQC6 194 aa17.76■□□□□ 0.43
SCARB1-205ENST00000538291 RPS6KA5O75582 802 aa17.76■□□□□ 0.43
SCARB1-205ENST00000538291 PLA2G12BQ9BX93 195 aa17.76■□□□□ 0.43
SCARB1-205ENST00000538291 TTC26A0AVF1 554 aa17.75■□□□□ 0.43
SCARB1-205ENST00000538291 RTN2O75298 545 aa17.75■□□□□ 0.43
SCARB1-205ENST00000538291 CD4P01730 458 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms