RNA–Protein interactions for RNA: ENST00000537634.1

CHD4-207, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 691 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-207ENST00000537634 CASTOR2A6NHX0 329 aa10.69□□□□□ -0.7
CHD4-207ENST00000537634 RECQL4O94761 1208 aa10.69□□□□□ -0.7
CHD4-207ENST00000537634 MYBP10242 640 aa10.69□□□□□ -0.7
CHD4-207ENST00000537634 MUTP22033 750 aa10.69□□□□□ -0.7
CHD4-207ENST00000537634 GBP2P32456 591 aaPredicted RBP10.69□□□□□ -0.7
CHD4-207ENST00000537634 CCT6AP40227 531 aaKnown RBP10.69□□□□□ -0.7
CHD4-207ENST00000537634 TRAPPC10P48553 1259 aa10.69□□□□□ -0.7
CHD4-207ENST00000537634 TUSC3Q13454 348 aa10.69□□□□□ -0.7
CHD4-207ENST00000537634 TDGQ13569 410 aa10.69□□□□□ -0.7
CHD4-207ENST00000537634 PALB2Q86YC2 1186 aa10.69□□□□□ -0.7
CHD4-207ENST00000537634 GLYCTKQ8IVS8 523 aa10.69□□□□□ -0.7
CHD4-207ENST00000537634 GPR65Q8IYL9 337 aa10.69□□□□□ -0.7
CHD4-207ENST00000537634 HASPINQ8TF76 798 aa10.69□□□□□ -0.7
CHD4-207ENST00000537634 HDAC7Q8WUI4 952 aa10.69□□□□□ -0.7
CHD4-207ENST00000537634 BSNDQ8WZ55 320 aa10.69□□□□□ -0.7
CHD4-207ENST00000537634 SMG7Q92540 1137 aaKnown RBP10.69□□□□□ -0.7
CHD4-207ENST00000537634 RABGGTAQ92696 567 aa10.69□□□□□ -0.7
CHD4-207ENST00000537634 IFT74Q96LB3 600 aa10.69□□□□□ -0.7
CHD4-207ENST00000537634 PHOX2BQ99453 314 aa10.69□□□□□ -0.7
CHD4-207ENST00000537634 RHOBTB2Q9BYZ6 727 aa10.69□□□□□ -0.7
CHD4-207ENST00000537634 PLEKHA4Q9H4M7 779 aa10.69□□□□□ -0.7
CHD4-207ENST00000537634 PIDD1Q9HB75 910 aa10.69□□□□□ -0.7
CHD4-207ENST00000537634 SH2B1Q9NRF2 756 aaPredicted RBP10.69□□□□□ -0.7
CHD4-207ENST00000537634 FNIP2Q9P278 1114 aa10.69□□□□□ -0.7
CHD4-207ENST00000537634 CACNG4Q9UBN1 327 aa10.69□□□□□ -0.7
CHD4-207ENST00000537634 TTLL13PA6NNM8 815 aa10.68□□□□□ -0.7
CHD4-207ENST00000537634 ACKR2O00590 384 aa10.68□□□□□ -0.7
CHD4-207ENST00000537634 PTGESO14684 152 aa10.68□□□□□ -0.7
CHD4-207ENST00000537634 TGM5O43548 720 aa10.68□□□□□ -0.7
CHD4-207ENST00000537634 GALR2O43603 387 aaPredicted RBP10.68□□□□□ -0.7
CHD4-207ENST00000537634 RFPL2O75678 378 aa10.68□□□□□ -0.7
CHD4-207ENST00000537634 C1RP00736 705 aa10.68□□□□□ -0.7
CHD4-207ENST00000537634 THP07101 528 aa10.68□□□□□ -0.7
CHD4-207ENST00000537634 SPATA31D3P0C874 917 aa10.68□□□□□ -0.7
CHD4-207ENST00000537634 RPL17P18621 184 aaKnown RBP10.68□□□□□ -0.7
CHD4-207ENST00000537634 FXR2P51116 673 aaKnown RBP eCLIP10.68□□□□□ -0.72e-11■■■■■ 31.1
CHD4-207ENST00000537634 EFNA5P52803 228 aa10.68□□□□□ -0.7
CHD4-207ENST00000537634 DCAF4L1Q3SXM0 396 aa10.68□□□□□ -0.7
CHD4-207ENST00000537634 ASTLQ6HA08 431 aaPredicted RBP10.68□□□□□ -0.7
CHD4-207ENST00000537634 SPATA31D4Q6ZUB0 917 aa10.68□□□□□ -0.7
CHD4-207ENST00000537634 APBB1IPQ7Z5R6 666 aaPredicted RBP10.68□□□□□ -0.7
CHD4-207ENST00000537634 KIFAP3Q92845 792 aa10.68□□□□□ -0.7
CHD4-207ENST00000537634 ATOH1Q92858 354 aaPredicted RBP10.68□□□□□ -0.7
CHD4-207ENST00000537634 PAAF1Q9BRP4 392 aa10.68□□□□□ -0.7
CHD4-207ENST00000537634 RAB34Q9BZG1 259 aa10.68□□□□□ -0.7
CHD4-207ENST00000537634 CCDC113Q9H0I3 377 aa10.68□□□□□ -0.7
CHD4-207ENST00000537634 BHMT2Q9H2M3 363 aa10.68□□□□□ -0.7
CHD4-207ENST00000537634 KCNK12Q9HB15 430 aa10.68□□□□□ -0.7
CHD4-207ENST00000537634 WDR6Q9NNW5 1121 aaKnown RBP10.68□□□□□ -0.7
CHD4-207ENST00000537634 FAM86C1Q9NVL1 165 aa10.68□□□□□ -0.7
CHD4-207ENST00000537634 ZDHHC7Q9NXF8 308 aa10.68□□□□□ -0.7
CHD4-207ENST00000537634 SNTG2Q9NY99 539 aa10.68□□□□□ -0.7
CHD4-207ENST00000537634 IGSF9Q9P2J2 1179 aa10.68□□□□□ -0.7
CHD4-207ENST00000537634 LRWD1Q9UFC0 647 aa10.68□□□□□ -0.7
CHD4-207ENST00000537634 FBXL21Q9UKT6 434 aa10.68□□□□□ -0.7
CHD4-207ENST00000537634 DUSP12Q9UNI6 340 aa10.68□□□□□ -0.7
CHD4-207ENST00000537634 KIF4AO95239 1232 aa10.67□□□□□ -0.7
CHD4-207ENST00000537634 ELAVL2Q12926 359 aaKnown RBP10.67□□□□□ -0.7
CHD4-207ENST00000537634 NBR1Q14596 966 aa10.67□□□□□ -0.7
CHD4-207ENST00000537634 RTP2Q5QGT7 225 aa10.67□□□□□ -0.7
CHD4-207ENST00000537634 LIN9Q5TKA1 542 aa10.67□□□□□ -0.7
CHD4-207ENST00000537634 FAM171A1Q5VUB5 890 aa10.67□□□□□ -0.7
CHD4-207ENST00000537634 EEF1DP3Q658K8 133 aa10.67□□□□□ -0.7
CHD4-207ENST00000537634 PRSS55Q6UWB4 352 aaPredicted RBP10.67□□□□□ -0.7
CHD4-207ENST00000537634 CEP57Q86XR8 500 aa10.67□□□□□ -0.7
CHD4-207ENST00000537634 TMEM105Q8N8V8 129 aa10.67□□□□□ -0.7
CHD4-207ENST00000537634 FLCNQ8NFG4 579 aa10.67□□□□□ -0.7
CHD4-207ENST00000537634 SNX29Q8TEQ0 813 aa10.67□□□□□ -0.7
CHD4-207ENST00000537634 ZNF707Q96C28 371 aaPredicted RBP10.67□□□□□ -0.7
CHD4-207ENST00000537634 TTPALQ9BTX7 342 aa10.67□□□□□ -0.7
CHD4-207ENST00000537634 KIFC3Q9BVG8 833 aa10.67□□□□□ -0.7
CHD4-207ENST00000537634 NT5C3AQ9H0P0 336 aa10.67□□□□□ -0.7
CHD4-207ENST00000537634 DDX19AQ9NUU7 478 aaKnown RBP10.67□□□□□ -0.7
CHD4-207ENST00000537634 DAXXQ9UER7 740 aaPredicted RBP10.67□□□□□ -0.7
CHD4-207ENST00000537634 KIAA1024Q9UPX6 916 aa10.67□□□□□ -0.7
CHD4-207ENST00000537634 USP20Q9Y2K6 914 aa10.67□□□□□ -0.7
CHD4-207ENST00000537634 GDAQ9Y2T3 454 aa10.67□□□□□ -0.7
CHD4-207ENST00000537634 STK24Q9Y6E0 443 aa10.67□□□□□ -0.7
CHD4-207ENST00000537634 H0Y858 1186 aa10.66□□□□□ -0.7
CHD4-207ENST00000537634 N4BP1O75113 896 aaKnown RBP10.66□□□□□ -0.7
CHD4-207ENST00000537634 EDN1P05305 212 aa10.66□□□□□ -0.7
CHD4-207ENST00000537634 U2AF2P26368 475 aaKnown RBP eCLIP10.66□□□□□ -0.7
CHD4-207ENST00000537634 CLCN5P51795 746 aa10.66□□□□□ -0.7
CHD4-207ENST00000537634 PTGDRQ13258 359 aa10.66□□□□□ -0.7
CHD4-207ENST00000537634 PDIA5Q14554 519 aa10.66□□□□□ -0.7
CHD4-207ENST00000537634 PSMD5Q16401 504 aa10.66□□□□□ -0.7
CHD4-207ENST00000537634 ECM1Q16610 540 aa10.66□□□□□ -0.7
CHD4-207ENST00000537634 ATF7IP2Q5U623 682 aa10.66□□□□□ -0.7
CHD4-207ENST00000537634 PDXDC1Q6P996 788 aa10.66□□□□□ -0.7
CHD4-207ENST00000537634 LILRA6Q6PI73 481 aa10.66□□□□□ -0.7
CHD4-207ENST00000537634 GET4Q7L5D6 327 aaPredicted RBP10.66□□□□□ -0.7
CHD4-207ENST00000537634 SIX5Q8N196 739 aa10.66□□□□□ -0.7
CHD4-207ENST00000537634 C4orf32Q8N8J7 132 aa10.66□□□□□ -0.7
CHD4-207ENST00000537634 IGSF22Q8N9C0 903 aa10.66□□□□□ -0.7
CHD4-207ENST00000537634 PIK3R5Q8WYR1 880 aa10.66□□□□□ -0.7
CHD4-207ENST00000537634 MYADMQ96S97 322 aa10.66□□□□□ -0.7
CHD4-207ENST00000537634 PRKD2Q9BZL6 878 aa10.66□□□□□ -0.7
CHD4-207ENST00000537634 POLD4Q9HCU8 107 aa10.66□□□□□ -0.7
CHD4-207ENST00000537634 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.66□□□□□ -0.7
CHD4-207ENST00000537634 EPS15L1Q9UBC2 864 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms