RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 PTPRJQ12913 1337 aa17.04■□□□□ 0.32
SFSWAP-206ENST00000537582 TRIM43BA6NCK2 446 aa17.03■□□□□ 0.32
SFSWAP-206ENST00000537582 ZNF233A6NK53 670 aa17.03■□□□□ 0.32
SFSWAP-206ENST00000537582 PES1O00541 588 aaKnown RBP17.03■□□□□ 0.32
SFSWAP-206ENST00000537582 PITPNM1O00562 1244 aa17.03■□□□□ 0.32
SFSWAP-206ENST00000537582 GPR182O15218 404 aa17.03■□□□□ 0.32
SFSWAP-206ENST00000537582 STAG3L1P0CL83 205 aa17.03■□□□□ 0.32
SFSWAP-206ENST00000537582 BFSP1Q12934 665 aa17.03■□□□□ 0.32
SFSWAP-206ENST00000537582 PCBP1Q15365 356 aaKnown RBP eCLIP17.03■□□□□ 0.32
SFSWAP-206ENST00000537582 ENOX2Q16206 610 aaKnown RBP17.03■□□□□ 0.32
SFSWAP-206ENST00000537582 MAN2A1Q16706 1144 aa17.03■□□□□ 0.32
SFSWAP-206ENST00000537582 VWA3BQ502W6 1294 aa17.03■□□□□ 0.32
SFSWAP-206ENST00000537582 TCERG1LQ5VWI1 586 aa17.03■□□□□ 0.32
SFSWAP-206ENST00000537582 LMBRD2Q68DH5 695 aaPredicted RBP17.03■□□□□ 0.32
SFSWAP-206ENST00000537582 TMEM130Q8N3G9 435 aa17.03■□□□□ 0.32
SFSWAP-206ENST00000537582 TRIM43Q96BQ3 446 aaPredicted RBP17.03■□□□□ 0.32
SFSWAP-206ENST00000537582 MFSD14AQ96MC6 490 aa17.03■□□□□ 0.32
SFSWAP-206ENST00000537582 PDE11AQ9HCR9 933 aa17.03■□□□□ 0.32
SFSWAP-206ENST00000537582 RTN4Q9NQC3 1192 aaKnown RBP17.03■□□□□ 0.32
SFSWAP-206ENST00000537582 PRDM5Q9NQX1 630 aaPredicted RBP17.03■□□□□ 0.32
SFSWAP-206ENST00000537582 RBAKQ9NYW8 714 aaPredicted RBP17.03■□□□□ 0.32
SFSWAP-206ENST00000537582 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.03■□□□□ 0.32
SFSWAP-206ENST00000537582 LGALS16A8MUM7 142 aa17.02■□□□□ 0.32
SFSWAP-206ENST00000537582 CXCL8P10145 99 aa17.02■□□□□ 0.32
SFSWAP-206ENST00000537582 IBSPP21815 317 aaPredicted RBP17.02■□□□□ 0.32
SFSWAP-206ENST00000537582 AXLP30530 894 aa17.02■□□□□ 0.32
SFSWAP-206ENST00000537582 VAMP7P51809 220 aa17.02■□□□□ 0.32
SFSWAP-206ENST00000537582 NCBP1Q09161 790 aaKnown RBP17.02■□□□□ 0.32
SFSWAP-206ENST00000537582 DSC3Q14574 896 aa17.02■□□□□ 0.32
SFSWAP-206ENST00000537582 NR1I3Q14994 352 aa17.02■□□□□ 0.32
SFSWAP-206ENST00000537582 TWF2Q6IBS0 349 aaKnown RBP17.02■□□□□ 0.32
SFSWAP-206ENST00000537582 ANKRD20A12PQ8NF67 263 aa17.02■□□□□ 0.32
SFSWAP-206ENST00000537582 ABHD8Q96I13 439 aa17.02■□□□□ 0.32
SFSWAP-206ENST00000537582 ADPGKQ9BRR6 497 aa17.02■□□□□ 0.32
SFSWAP-206ENST00000537582 APOL6Q9BWW8 343 aa17.02■□□□□ 0.32
SFSWAP-206ENST00000537582 IFIH1Q9BYX4 1025 aaKnown RBP17.02■□□□□ 0.32
SFSWAP-206ENST00000537582 RNF39Q9H2S5 420 aa17.02■□□□□ 0.32
SFSWAP-206ENST00000537582 NDST4Q9H3R1 872 aa17.02■□□□□ 0.32
SFSWAP-206ENST00000537582 METTL14Q9HCE5 456 aaKnown RBP17.02■□□□□ 0.32
SFSWAP-206ENST00000537582 RNF19AQ9NV58 838 aa17.02■□□□□ 0.32
SFSWAP-206ENST00000537582 LRRIQ3A6PVS8 624 aaPredicted RBP17.02■□□□□ 0.31
SFSWAP-206ENST00000537582 KIAA0391O15091 583 aaKnown RBP17.02■□□□□ 0.31
SFSWAP-206ENST00000537582 PPP3CAQ08209 521 aa17.02■□□□□ 0.31
SFSWAP-206ENST00000537582 KCNH2Q12809 1159 aa17.02■□□□□ 0.31
SFSWAP-206ENST00000537582 INTS8Q75QN2 995 aaKnown RBP17.02■□□□□ 0.31
SFSWAP-206ENST00000537582 SMG8Q8ND04 991 aaKnown RBP17.02■□□□□ 0.31
SFSWAP-206ENST00000537582 LINC01599Q8WXQ3 324 aa17.02■□□□□ 0.31
SFSWAP-206ENST00000537582 FAM212AQ96EL1 285 aa17.02■□□□□ 0.31
SFSWAP-206ENST00000537582 KIAA1586Q9HCI6 787 aa17.02■□□□□ 0.31
SFSWAP-206ENST00000537582 SNTG2Q9NY99 539 aa17.02■□□□□ 0.31
SFSWAP-206ENST00000537582 TANC1Q9C0D5 1861 aa17.01■□□□□ 0.31
SFSWAP-206ENST00000537582 SCN5AQ14524 2016 aa17.01■□□□□ 0.31
SFSWAP-206ENST00000537582 MEIS3P2A8K0S8 358 aa17.01■□□□□ 0.31
SFSWAP-206ENST00000537582 MAPK13O15264 365 aa17.01■□□□□ 0.31
SFSWAP-206ENST00000537582 LDHAP00338 332 aaKnown RBP17.01■□□□□ 0.31
SFSWAP-206ENST00000537582 DLATP10515 647 aaKnown RBP17.01■□□□□ 0.31
SFSWAP-206ENST00000537582 KRT13P13646 458 aa17.01■□□□□ 0.31
SFSWAP-206ENST00000537582 AKAP5P24588 427 aa17.01■□□□□ 0.31
SFSWAP-206ENST00000537582 KLK7P49862 253 aa17.01■□□□□ 0.31
SFSWAP-206ENST00000537582 PSMD6Q15008 389 aa17.01■□□□□ 0.31
SFSWAP-206ENST00000537582 DCAF4L1Q3SXM0 396 aa17.01■□□□□ 0.31
SFSWAP-206ENST00000537582 CBWD6Q4V339 395 aa17.01■□□□□ 0.31
SFSWAP-206ENST00000537582 CBWD3Q5JTY5 395 aa17.01■□□□□ 0.31
SFSWAP-206ENST00000537582 CBWD5Q5RIA9 395 aa17.01■□□□□ 0.31
SFSWAP-206ENST00000537582 SCARA3Q6AZY7 606 aa17.01■□□□□ 0.31
SFSWAP-206ENST00000537582 RTN4RL1Q86UN2 441 aaPredicted RBP17.01■□□□□ 0.31
SFSWAP-206ENST00000537582 BRSK2Q8IWQ3 736 aa17.01■□□□□ 0.31
SFSWAP-206ENST00000537582 USP38Q8NB14 1042 aa17.01■□□□□ 0.31
SFSWAP-206ENST00000537582 PARD3BQ8TEW8 1205 aa17.01■□□□□ 0.31
SFSWAP-206ENST00000537582 VWCEQ96DN2 955 aa17.01■□□□□ 0.31
SFSWAP-206ENST00000537582 ADAM2Q99965 735 aa17.01■□□□□ 0.31
SFSWAP-206ENST00000537582 TRIM6Q9C030 488 aaPredicted RBP17.01■□□□□ 0.31
SFSWAP-206ENST00000537582 IPPQ9Y573 584 aa17.01■□□□□ 0.31
SFSWAP-206ENST00000537582 SQORQ9Y6N5 450 aa17.01■□□□□ 0.31
SFSWAP-206ENST00000537582 CAPN2P17655 700 aa17■□□□□ 0.31
SFSWAP-206ENST00000537582 GRM5P41594 1212 aa17■□□□□ 0.31
SFSWAP-206ENST00000537582 GCLMP48507 274 aa17■□□□□ 0.31
SFSWAP-206ENST00000537582 UBXN1Q04323 297 aa17■□□□□ 0.31
SFSWAP-206ENST00000537582 SLC10A6Q3KNW5 377 aa17■□□□□ 0.31
SFSWAP-206ENST00000537582 DEFB128Q7Z7B8 93 aa17■□□□□ 0.31
SFSWAP-206ENST00000537582 DBF4BQ8NFT6 615 aa17■□□□□ 0.31
SFSWAP-206ENST00000537582 ZNF516Q92618 1163 aa17■□□□□ 0.31
SFSWAP-206ENST00000537582 PCDHB2Q9Y5E7 798 aa17■□□□□ 0.31
SFSWAP-206ENST00000537582 LACTBL1A8MY62 500 aa16.99■□□□□ 0.31
SFSWAP-206ENST00000537582 LRRN2O75325 713 aa16.99■□□□□ 0.31
SFSWAP-206ENST00000537582 AFPP02771 609 aaKnown RBP16.99■□□□□ 0.31
SFSWAP-206ENST00000537582 CLTAP09496 248 aa16.99■□□□□ 0.31
SFSWAP-206ENST00000537582 APBA1Q02410 837 aa16.99■□□□□ 0.31
SFSWAP-206ENST00000537582 PLEKHG4Q58EX7 1191 aa16.99■□□□□ 0.31
SFSWAP-206ENST00000537582 OR5B17Q8NGF7 314 aa16.99■□□□□ 0.31
SFSWAP-206ENST00000537582 TMC2Q8TDI7 906 aa16.99■□□□□ 0.31
SFSWAP-206ENST00000537582 LPPQ93052 612 aa16.99■□□□□ 0.31
SFSWAP-206ENST00000537582 CCDC51Q96ER9 411 aa16.99■□□□□ 0.31
SFSWAP-206ENST00000537582 CRACR2AQ9BSW2 395 aa16.99■□□□□ 0.31
SFSWAP-206ENST00000537582 RPF1Q9H9Y2 349 aaKnown RBP16.99■□□□□ 0.31
SFSWAP-206ENST00000537582 CHST12Q9NRB3 414 aa16.99■□□□□ 0.31
SFSWAP-206ENST00000537582 FAM105AQ9NUU6 356 aa16.99■□□□□ 0.31
SFSWAP-206ENST00000537582 KLK14Q9P0G3 267 aa16.99■□□□□ 0.31
SFSWAP-206ENST00000537582 ALPK3Q96L96 1907 aa16.99■□□□□ 0.31
SFSWAP-206ENST00000537582 KIAA0355O15063 1070 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms