RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 OSBPP22059 807 aa11.58□□□□□ -0.56
CLSTN3-207ENST00000537408 KCNMA1Q12791 1236 aa11.58□□□□□ -0.56
CLSTN3-207ENST00000537408 CKAP2Q8WWK9 683 aa11.58□□□□□ -0.56
CLSTN3-207ENST00000537408 TMEM87BQ96K49 555 aa11.58□□□□□ -0.56
CLSTN3-207ENST00000537408 GLIS2Q9BZE0 524 aaPredicted RBP11.58□□□□□ -0.56
CLSTN3-207ENST00000537408 EURLQ9NYK6 297 aa11.58□□□□□ -0.56
CLSTN3-207ENST00000537408 UMODL1Q5DID0 1318 aa11.58□□□□□ -0.56
CLSTN3-207ENST00000537408 TTI1O43156 1089 aa11.58□□□□□ -0.56
CLSTN3-207ENST00000537408 ZWINTO95229 277 aa11.58□□□□□ -0.56
CLSTN3-207ENST00000537408 KRT18P05783 430 aaKnown RBP11.58□□□□□ -0.56
CLSTN3-207ENST00000537408 CTDSPL2Q05D32 466 aa11.58□□□□□ -0.56
CLSTN3-207ENST00000537408 TBL3Q12788 808 aaKnown RBP11.58□□□□□ -0.56
CLSTN3-207ENST00000537408 MTFR1Q15390 333 aa11.58□□□□□ -0.56
CLSTN3-207ENST00000537408 APOA5Q6Q788 366 aa11.58□□□□□ -0.56
CLSTN3-207ENST00000537408 POTEEQ6S8J3 1075 aa11.58□□□□□ -0.56
CLSTN3-207ENST00000537408 TMTC3Q6ZXV5 915 aa11.58□□□□□ -0.56
CLSTN3-207ENST00000537408 MAPKAPK5Q8IW41 473 aa11.58□□□□□ -0.56
CLSTN3-207ENST00000537408 ANKRD13AQ8IZ07 590 aa11.58□□□□□ -0.56
CLSTN3-207ENST00000537408 DTX3LQ8TDB6 740 aa11.58□□□□□ -0.56
CLSTN3-207ENST00000537408 SCFD2Q8WU76 684 aa11.58□□□□□ -0.56
CLSTN3-207ENST00000537408 TGFBRAP1Q8WUH2 860 aa11.58□□□□□ -0.56
CLSTN3-207ENST00000537408 WRNIP1Q96S55 665 aa11.58□□□□□ -0.56
CLSTN3-207ENST00000537408 PRKAG3Q9UGI9 489 aa11.58□□□□□ -0.56
CLSTN3-207ENST00000537408 TMEM59LQ9UK28 342 aa11.58□□□□□ -0.56
CLSTN3-207ENST00000537408 A6NJR5 290 aa11.58□□□□□ -0.56
CLSTN3-207ENST00000537408 CPA3P15088 417 aa11.58□□□□□ -0.56
CLSTN3-207ENST00000537408 CCNA1P78396 465 aa11.58□□□□□ -0.56
CLSTN3-207ENST00000537408 ADRM1Q16186 407 aa11.58□□□□□ -0.56
CLSTN3-207ENST00000537408 C4orf50Q6ZRC1 276 aa11.58□□□□□ -0.56
CLSTN3-207ENST00000537408 SAPCD2Q86UD0 394 aa11.58□□□□□ -0.56
CLSTN3-207ENST00000537408 ECHDC2Q86YB7 292 aa11.58□□□□□ -0.56
CLSTN3-207ENST00000537408 FAM186BQ8IYM0 893 aa11.58□□□□□ -0.56
CLSTN3-207ENST00000537408 MAGEB18Q96M61 343 aa11.58□□□□□ -0.56
CLSTN3-207ENST00000537408 ROPN1BQ9BZX4 212 aaPredicted RBP11.58□□□□□ -0.56
CLSTN3-207ENST00000537408 KIAA1683Q9H0B3 1180 aa11.58□□□□□ -0.56
CLSTN3-207ENST00000537408 ADAM7Q9H2U9 754 aa11.58□□□□□ -0.56
CLSTN3-207ENST00000537408 ROPN1Q9HAT0 212 aaPredicted RBP11.58□□□□□ -0.56
CLSTN3-207ENST00000537408 STX18Q9P2W9 335 aaKnown RBP11.58□□□□□ -0.56
CLSTN3-207ENST00000537408 FADS3Q9Y5Q0 445 aa11.58□□□□□ -0.56
CLSTN3-207ENST00000537408 MATN2O00339 956 aa11.57□□□□□ -0.56
CLSTN3-207ENST00000537408 CCDC22O60826 627 aa11.57□□□□□ -0.56
CLSTN3-207ENST00000537408 DEXIO95424 95 aa11.57□□□□□ -0.56
CLSTN3-207ENST00000537408 KRT72Q14CN4 511 aa11.57□□□□□ -0.56
CLSTN3-207ENST00000537408 IZUMO2Q6UXV1 221 aa11.57□□□□□ -0.56
CLSTN3-207ENST00000537408 PASD1Q8IV76 773 aa11.57□□□□□ -0.56
CLSTN3-207ENST00000537408 SCAIQ8N9R8 606 aa11.57□□□□□ -0.56
CLSTN3-207ENST00000537408 FAM84BQ96KN1 310 aaPredicted RBP11.57□□□□□ -0.56
CLSTN3-207ENST00000537408 METTL5Q9NRN9 209 aaKnown RBP11.57□□□□□ -0.56
CLSTN3-207ENST00000537408 SERPINA10Q9UK55 444 aa11.57□□□□□ -0.56
CLSTN3-207ENST00000537408 LRRC53A6NM62 1247 aa11.57□□□□□ -0.56
CLSTN3-207ENST00000537408 HSPA6P17066 643 aa11.57□□□□□ -0.56
CLSTN3-207ENST00000537408 MED21Q13503 144 aa11.57□□□□□ -0.56
CLSTN3-207ENST00000537408 RABL6Q3YEC7 729 aaPredicted RBP11.57□□□□□ -0.56
CLSTN3-207ENST00000537408 ZC2HC1CQ53FD0 456 aaPredicted RBP11.57□□□□□ -0.56
CLSTN3-207ENST00000537408 EXOC8Q8IYI6 725 aa11.57□□□□□ -0.56
CLSTN3-207ENST00000537408 DEFB129Q9H1M3 183 aa11.57□□□□□ -0.56
CLSTN3-207ENST00000537408 FAIMQ9NVQ4 179 aa11.57□□□□□ -0.56
CLSTN3-207ENST00000537408 NDE1Q9NXR1 346 aa11.57□□□□□ -0.56
CLSTN3-207ENST00000537408 DKK3Q9UBP4 350 aa11.57□□□□□ -0.56
CLSTN3-207ENST00000537408 TBC1D12O60347 775 aa11.57□□□□□ -0.56
CLSTN3-207ENST00000537408 PLTPP55058 493 aa11.57□□□□□ -0.56
CLSTN3-207ENST00000537408 KHDC1Q4VXA5 237 aaKnown RBP11.57□□□□□ -0.56
CLSTN3-207ENST00000537408 ZNF280DQ6N043 979 aa11.57□□□□□ -0.56
CLSTN3-207ENST00000537408 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.57□□□□□ -0.56
CLSTN3-207ENST00000537408 SNX27Q96L92 541 aa11.57□□□□□ -0.56
CLSTN3-207ENST00000537408 CLIC5Q9NZA1 410 aa11.57□□□□□ -0.56
CLSTN3-207ENST00000537408 ZFP69BQ9UJL9 534 aa11.57□□□□□ -0.56
CLSTN3-207ENST00000537408 EFR3BQ9Y2G0 817 aa11.57□□□□□ -0.56
CLSTN3-207ENST00000537408 FRMD4BQ9Y2L6 1034 aa11.57□□□□□ -0.56
CLSTN3-207ENST00000537408 BRWD3Q6RI45 1802 aa11.57□□□□□ -0.56
CLSTN3-207ENST00000537408 NDUFB5O43674 189 aa11.57□□□□□ -0.56
CLSTN3-207ENST00000537408 KRT36O76013 467 aa11.57□□□□□ -0.56
CLSTN3-207ENST00000537408 STK10O94804 968 aaKnown RBP11.57□□□□□ -0.56
CLSTN3-207ENST00000537408 LDHAP00338 332 aaKnown RBP11.57□□□□□ -0.56
CLSTN3-207ENST00000537408 GM2AP17900 193 aa11.57□□□□□ -0.56
CLSTN3-207ENST00000537408 SLC29A2Q14542 456 aa11.57□□□□□ -0.56
CLSTN3-207ENST00000537408 FYB2Q5VWT5 728 aa11.57□□□□□ -0.56
CLSTN3-207ENST00000537408 C3orf67Q6ZVT6 689 aa11.57□□□□□ -0.56
CLSTN3-207ENST00000537408 IRF2BP1Q8IU81 584 aa11.57□□□□□ -0.56
CLSTN3-207ENST00000537408 UHMK1Q8TAS1 419 aaKnown RBP11.57□□□□□ -0.56
CLSTN3-207ENST00000537408 TANGO6Q9C0B7 1094 aa11.57□□□□□ -0.56
CLSTN3-207ENST00000537408 N4BP2Q86UW6 1770 aaPredicted RBP11.56□□□□□ -0.56
CLSTN3-207ENST00000537408 A0A087X0B3 334 aa11.56□□□□□ -0.56
CLSTN3-207ENST00000537408 SIGLEC16A6NMB1 481 aa11.56□□□□□ -0.56
CLSTN3-207ENST00000537408 CYP1A1P04798 512 aaPredicted RBP11.56□□□□□ -0.56
CLSTN3-207ENST00000537408 SPATA31D3P0C874 917 aa11.56□□□□□ -0.56
CLSTN3-207ENST00000537408 NFKBIAP25963 317 aa11.56□□□□□ -0.56
CLSTN3-207ENST00000537408 VARSP26640 1264 aaKnown RBP11.56□□□□□ -0.56
CLSTN3-207ENST00000537408 GEMIN4P57678 1058 aaKnown RBP11.56□□□□□ -0.56
CLSTN3-207ENST00000537408 FKBP1BP68106 108 aa11.56□□□□□ -0.56
CLSTN3-207ENST00000537408 CLUL1Q15846 466 aa11.56□□□□□ -0.56
CLSTN3-207ENST00000537408 SPATA31D4Q6ZUB0 917 aa11.56□□□□□ -0.56
CLSTN3-207ENST00000537408 TMEM109Q9BVC6 243 aa11.56□□□□□ -0.56
CLSTN3-207ENST00000537408 ZHX3Q9H4I2 956 aa11.56□□□□□ -0.56
CLSTN3-207ENST00000537408 DDX43Q9NXZ2 648 aaKnown RBP11.56□□□□□ -0.56
CLSTN3-207ENST00000537408 FAM187AA6NFU0 413 aa11.56□□□□□ -0.56
CLSTN3-207ENST00000537408 BOLA2-SMG1P6H3BVE0 249 aa11.56□□□□□ -0.56
CLSTN3-207ENST00000537408 SERPING1P05155 500 aa11.56□□□□□ -0.56
CLSTN3-207ENST00000537408 HALP42357 657 aa11.56□□□□□ -0.56
CLSTN3-207ENST00000537408 USP11P51784 963 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms