RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 JAZF1Q86VZ6 243 aa7.38□□□□□ -1.23
CCDC7-208ENST00000537047 AHI1Q8N157 1196 aa7.38□□□□□ -1.23
CCDC7-208ENST00000537047 LINC00476Q8WZB0 136 aa7.38□□□□□ -1.23
CCDC7-208ENST00000537047 TOPORSQ9NS56 1045 aaPredicted RBP7.38□□□□□ -1.23
CCDC7-208ENST00000537047 A0A087X0B3 334 aa7.37□□□□□ -1.23
CCDC7-208ENST00000537047 RBP3P10745 1247 aa7.37□□□□□ -1.23
CCDC7-208ENST00000537047 ZNF37AP17032 561 aaPredicted RBP7.37□□□□□ -1.23
CCDC7-208ENST00000537047 DDX6P26196 483 aaKnown RBP eCLIP7.37□□□□□ -1.23
CCDC7-208ENST00000537047 TAP1Q03518 808 aa7.37□□□□□ -1.23
CCDC7-208ENST00000537047 RESTQ13127 1097 aa7.37□□□□□ -1.23
CCDC7-208ENST00000537047 ATP13A4Q4VNC1 1196 aa7.37□□□□□ -1.23
CCDC7-208ENST00000537047 STRIP1Q5VSL9 837 aa7.37□□□□□ -1.23
CCDC7-208ENST00000537047 RASSF3Q86WH2 238 aa7.37□□□□□ -1.23
CCDC7-208ENST00000537047 CAVIN3Q969G5 261 aa7.37□□□□□ -1.23
CCDC7-208ENST00000537047 MFSD3Q96ES6 412 aa7.37□□□□□ -1.23
CCDC7-208ENST00000537047 WNT8AQ9H1J5 351 aa7.37□□□□□ -1.23
CCDC7-208ENST00000537047 CLCA2Q9UQC9 943 aa7.37□□□□□ -1.23
CCDC7-208ENST00000537047 SALL3Q9BXA9 1300 aa7.36□□□□□ -1.23
CCDC7-208ENST00000537047 PIPSLA2A3N6 862 aa7.36□□□□□ -1.23
CCDC7-208ENST00000537047 DRGXA6NNA5 263 aa7.36□□□□□ -1.23
CCDC7-208ENST00000537047 MARCH11A6NNE9 402 aa7.36□□□□□ -1.23
CCDC7-208ENST00000537047 LMO1P25800 156 aa7.36□□□□□ -1.23
CCDC7-208ENST00000537047 C21orf58P58505 322 aa7.36□□□□□ -1.23
CCDC7-208ENST00000537047 CCT2P78371 535 aaKnown RBP7.36□□□□□ -1.23
CCDC7-208ENST00000537047 MEF2AQ02078 507 aaPredicted RBP7.36□□□□□ -1.23
CCDC7-208ENST00000537047 RSAD2Q8WXG1 361 aa7.36□□□□□ -1.23
CCDC7-208ENST00000537047 KCNG1Q9UIX4 513 aa7.36□□□□□ -1.23
CCDC7-208ENST00000537047 PNPLA7Q6ZV29 1317 aa7.35□□□□□ -1.23
CCDC7-208ENST00000537047 DIRC3C9JPN6 131 aa7.35□□□□□ -1.23
CCDC7-208ENST00000537047 ELANEP08246 267 aa7.35□□□□□ -1.23
CCDC7-208ENST00000537047 ADSLP30566 484 aaPredicted RBP7.35□□□□□ -1.23
CCDC7-208ENST00000537047 CDK17Q00537 523 aa7.35□□□□□ -1.23
CCDC7-208ENST00000537047 CMIPQ8IY22 773 aa7.35□□□□□ -1.23
CCDC7-208ENST00000537047 FEZ1Q99689 392 aa7.35□□□□□ -1.23
CCDC7-208ENST00000537047 DPP7Q9UHL4 492 aa7.35□□□□□ -1.23
CCDC7-208ENST00000537047 FPGT-TNNI3KV9GXZ4 949 aa7.35□□□□□ -1.23
CCDC7-208ENST00000537047 CXorf49A8MYA2 514 aaPredicted RBP7.34□□□□□ -1.23
CCDC7-208ENST00000537047 MGAT1P26572 445 aa7.34□□□□□ -1.23
CCDC7-208ENST00000537047 PTPN7P35236 360 aa7.34□□□□□ -1.23
CCDC7-208ENST00000537047 SCAPQ12770 1279 aa7.34□□□□□ -1.23
CCDC7-208ENST00000537047 CLRN3Q8NCR9 226 aa7.34□□□□□ -1.23
CCDC7-208ENST00000537047 ZNF480Q8WV37 535 aa7.34□□□□□ -1.23
CCDC7-208ENST00000537047 POLR2AP24928 1970 aaKnown RBP7.33□□□□□ -1.24
CCDC7-208ENST00000537047 CCDC78A2IDD5 438 aa7.33□□□□□ -1.24
CCDC7-208ENST00000537047 NEMP1O14524 444 aa7.33□□□□□ -1.24
CCDC7-208ENST00000537047 PDE8AO60658 829 aa7.33□□□□□ -1.24
CCDC7-208ENST00000537047 HKR1P10072 659 aa7.33□□□□□ -1.24
CCDC7-208ENST00000537047 EGR2P11161 476 aaPredicted RBP7.33□□□□□ -1.24
CCDC7-208ENST00000537047 ITGAMP11215 1152 aa7.33□□□□□ -1.24
CCDC7-208ENST00000537047 BPIP17213 487 aa7.33□□□□□ -1.24
CCDC7-208ENST00000537047 UGT8Q16880 541 aa7.33□□□□□ -1.24
CCDC7-208ENST00000537047 COLEC12Q5KU26 742 aa7.33□□□□□ -1.24
CCDC7-208ENST00000537047 FBXO42Q6P3S6 717 aa7.33□□□□□ -1.24
CCDC7-208ENST00000537047 Q6ZVL8 140 aa7.33□□□□□ -1.24
CCDC7-208ENST00000537047 RD3Q7Z3Z2 195 aa7.33□□□□□ -1.24
CCDC7-208ENST00000537047 KIAA0907Q7Z7F0 614 aaPredicted RBP7.33□□□□□ -1.24
CCDC7-208ENST00000537047 SLC44A3Q8N4M1 653 aa7.33□□□□□ -1.24
CCDC7-208ENST00000537047 ZSWIM1Q9BR11 485 aa7.33□□□□□ -1.24
CCDC7-208ENST00000537047 ALG13Q9NP73 1137 aaKnown RBP7.33□□□□□ -1.24
CCDC7-208ENST00000537047 PLAAQ9Y263 795 aa7.33□□□□□ -1.24
CCDC7-208ENST00000537047 RPTORQ8N122 1335 aa7.32□□□□□ -1.24
CCDC7-208ENST00000537047 GASTP01350 101 aa7.32□□□□□ -1.24
CCDC7-208ENST00000537047 CFIP05156 583 aa7.32□□□□□ -1.24
CCDC7-208ENST00000537047 MYCLP1P12525 358 aaPredicted RBP7.32□□□□□ -1.24
CCDC7-208ENST00000537047 CRHR1P34998 444 aa7.32□□□□□ -1.24
CCDC7-208ENST00000537047 AVPR1BP47901 424 aa7.32□□□□□ -1.24
CCDC7-208ENST00000537047 FLT3LGP49771 235 aa7.32□□□□□ -1.24
CCDC7-208ENST00000537047 RAP2BP61225 183 aa7.32□□□□□ -1.24
CCDC7-208ENST00000537047 MST1LQ2TV78 715 aa7.32□□□□□ -1.24
CCDC7-208ENST00000537047 PRR16Q569H4 304 aa7.32□□□□□ -1.24
CCDC7-208ENST00000537047 ATXN7L2Q5T6C5 722 aaPredicted RBP7.32□□□□□ -1.24
CCDC7-208ENST00000537047 AGAP9Q5VTM2 703 aa7.32□□□□□ -1.24
CCDC7-208ENST00000537047 LRCH2Q5VUJ6 765 aa7.32□□□□□ -1.24
CCDC7-208ENST00000537047 HDGFL2Q7Z4V5 671 aaPredicted RBP7.32□□□□□ -1.24
CCDC7-208ENST00000537047 TRMT2AQ8IZ69 625 aaKnown RBP7.32□□□□□ -1.24
CCDC7-208ENST00000537047 OR56A1Q8NGH5 318 aa7.32□□□□□ -1.24
CCDC7-208ENST00000537047 ZFP28Q8NHY6 868 aa7.32□□□□□ -1.24
CCDC7-208ENST00000537047 TSPEARQ8WU66 669 aa7.32□□□□□ -1.24
CCDC7-208ENST00000537047 RIN2Q8WYP3 895 aaPredicted RBP7.32□□□□□ -1.24
CCDC7-208ENST00000537047 COQ10AQ96MF6 247 aa7.32□□□□□ -1.24
CCDC7-208ENST00000537047 RSAD1Q9HA92 442 aa7.32□□□□□ -1.24
CCDC7-208ENST00000537047 COL11A2P13942 1736 aaPredicted RBP7.32□□□□□ -1.24
CCDC7-208ENST00000537047 ATRNL1Q5VV63 1379 aa7.32□□□□□ -1.24
CCDC7-208ENST00000537047 SPATA31A6Q5VVP1 1343 aa7.31□□□□□ -1.24
CCDC7-208ENST00000537047 AKR1B10O60218 316 aa7.31□□□□□ -1.24
CCDC7-208ENST00000537047 SPATA31D3P0C874 917 aa7.31□□□□□ -1.24
CCDC7-208ENST00000537047 MPLP40238 635 aa7.31□□□□□ -1.24
CCDC7-208ENST00000537047 FSCN1Q16658 493 aaKnown RBP7.31□□□□□ -1.24
CCDC7-208ENST00000537047 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.31□□□□□ -1.24
CCDC7-208ENST00000537047 TSHZ3Q63HK5 1081 aa7.31□□□□□ -1.24
CCDC7-208ENST00000537047 B3GNTL1Q67FW5 361 aaPredicted RBP7.31□□□□□ -1.24
CCDC7-208ENST00000537047 SYCE2Q6PIF2 218 aa7.31□□□□□ -1.24
CCDC7-208ENST00000537047 SPATA31D4Q6ZUB0 917 aa7.31□□□□□ -1.24
CCDC7-208ENST00000537047 PDZD4Q76G19 769 aaPredicted RBP7.31□□□□□ -1.24
CCDC7-208ENST00000537047 SIMC1Q8NDZ2 872 aa7.31□□□□□ -1.24
CCDC7-208ENST00000537047 TGFBRAP1Q8WUH2 860 aa7.31□□□□□ -1.24
CCDC7-208ENST00000537047 ADARB2Q9NS39 739 aaKnown RBP7.31□□□□□ -1.24
CCDC7-208ENST00000537047 KLHL11Q9NVR0 708 aa7.31□□□□□ -1.24
CCDC7-208ENST00000537047 RNF181Q9P0P0 153 aa7.31□□□□□ -1.24
CCDC7-208ENST00000537047 COX11Q9Y6N1 276 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms