RNA–Protein interactions for RNA: ENST00000536843.5

CHFR-213, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,424 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-213ENST00000536843 USP4Q13107 963 aa16.69■□□□□ 0.26
CHFR-213ENST00000536843 RRP1BQ14684 758 aaKnown RBP16.69■□□□□ 0.26
CHFR-213ENST00000536843 APOBEC3HQ6NTF7 200 aaKnown RBP16.69■□□□□ 0.26
CHFR-213ENST00000536843 ZFPM1Q8IX07 1006 aa16.69■□□□□ 0.26
CHFR-213ENST00000536843 PLEKHG4BQ96PX9 1271 aa16.69■□□□□ 0.26
CHFR-213ENST00000536843 LRRC37BQ96QE4 947 aa16.69■□□□□ 0.26
CHFR-213ENST00000536843 NDNQ99608 321 aa16.69■□□□□ 0.26
CHFR-213ENST00000536843 PITPNM3Q9BZ71 974 aa16.69■□□□□ 0.26
CHFR-213ENST00000536843 ATXN10Q9UBB4 475 aa16.69■□□□□ 0.26
CHFR-213ENST00000536843 SLC4A7Q9Y6M7 1214 aa16.69■□□□□ 0.26
CHFR-213ENST00000536843 LRRC37AA6NMS7 1700 aa16.69■□□□□ 0.26
CHFR-213ENST00000536843 FOCADQ5VW36 1801 aa16.68■□□□□ 0.26
CHFR-213ENST00000536843 TULP1O00294 542 aaPredicted RBP16.68■□□□□ 0.26
CHFR-213ENST00000536843 ATP9AO75110 1047 aa16.68■□□□□ 0.26
CHFR-213ENST00000536843 BRAFP15056 766 aa16.68■□□□□ 0.26
CHFR-213ENST00000536843 NPR1P16066 1061 aa16.68■□□□□ 0.26
CHFR-213ENST00000536843 SLC9A1P19634 815 aa16.68■□□□□ 0.26
CHFR-213ENST00000536843 GSTT1P30711 240 aa16.68■□□□□ 0.26
CHFR-213ENST00000536843 TNNI2P48788 182 aa16.68■□□□□ 0.26
CHFR-213ENST00000536843 FAM26FQ5R3K3 315 aa16.68■□□□□ 0.26
CHFR-213ENST00000536843 CYFIP1Q7L576 1253 aa16.68■□□□□ 0.26
CHFR-213ENST00000536843 SLC35G2Q8TBE7 412 aa16.68■□□□□ 0.26
CHFR-213ENST00000536843 DNAJC19Q96DA6 116 aa16.68■□□□□ 0.26
CHFR-213ENST00000536843 OSGEPQ9NPF4 335 aa16.68■□□□□ 0.26
CHFR-213ENST00000536843 KCNQ5Q9NR82 932 aa16.68■□□□□ 0.26
CHFR-213ENST00000536843 G3V3G9 751 aa16.68■□□□□ 0.26
CHFR-213ENST00000536843 MAPK13O15264 365 aa16.68■□□□□ 0.26
CHFR-213ENST00000536843 DCTN3O75935 186 aa16.68■□□□□ 0.26
CHFR-213ENST00000536843 TMEM253P0C7T8 217 aa16.68■□□□□ 0.26
CHFR-213ENST00000536843 CTNNA2P26232 953 aa16.68■□□□□ 0.26
CHFR-213ENST00000536843 JAM2P57087 298 aa16.68■□□□□ 0.26
CHFR-213ENST00000536843 EN1Q05925 392 aaPredicted RBP16.68■□□□□ 0.26
CHFR-213ENST00000536843 DCAF8Q5TAQ9 597 aa16.68■□□□□ 0.26
CHFR-213ENST00000536843 DPY19L2Q6NUT2 758 aa16.68■□□□□ 0.26
CHFR-213ENST00000536843 KCTD1Q719H9 257 aa16.68■□□□□ 0.26
CHFR-213ENST00000536843 PRELID2Q8N945 189 aa16.68■□□□□ 0.26
CHFR-213ENST00000536843 U2AF1L4Q8WU68 220 aaKnown RBP16.68■□□□□ 0.26
CHFR-213ENST00000536843 VCX3BQ9H321 246 aa16.68■□□□□ 0.26
CHFR-213ENST00000536843 VCX3AQ9NNX9 186 aa16.68■□□□□ 0.26
CHFR-213ENST00000536843 SYNGAP1Q96PV0 1343 aa16.68■□□□□ 0.26
CHFR-213ENST00000536843 USP17L10C9JJH3 530 aa16.67■□□□□ 0.26
CHFR-213ENST00000536843 GIT2Q14161 759 aa16.67■□□□□ 0.26
CHFR-213ENST00000536843 TMEM119Q4V9L6 283 aa16.67■□□□□ 0.26
CHFR-213ENST00000536843 SNX30Q5VWJ9 437 aa16.67■□□□□ 0.26
CHFR-213ENST00000536843 PPP1R21Q6ZMI0 780 aa16.67■□□□□ 0.26
CHFR-213ENST00000536843 C7orf43Q8WVR3 580 aa16.67■□□□□ 0.26
CHFR-213ENST00000536843 TEKT1Q969V4 418 aa16.67■□□□□ 0.26
CHFR-213ENST00000536843 GBP5Q96PP8 586 aa16.67■□□□□ 0.26
CHFR-213ENST00000536843 NUDT12Q9BQG2 462 aa16.67■□□□□ 0.26
CHFR-213ENST00000536843 CCDC28BQ9BUN5 200 aa16.67■□□□□ 0.26
CHFR-213ENST00000536843 CDC42EP4Q9H3Q1 356 aaKnown RBP16.67■□□□□ 0.26
CHFR-213ENST00000536843 G3BP2Q9UN86 482 aaKnown RBP16.67■□□□□ 0.26
CHFR-213ENST00000536843 ADGRA3Q8IWK6 1321 aa16.67■□□□□ 0.26
CHFR-213ENST00000536843 POTEMA6NI47 508 aa16.67■□□□□ 0.26
CHFR-213ENST00000536843 MAGEB2O15479 319 aa16.67■□□□□ 0.26
CHFR-213ENST00000536843 PON1P27169 355 aa16.67■□□□□ 0.26
CHFR-213ENST00000536843 MARK3P27448 753 aa16.67■□□□□ 0.26
CHFR-213ENST00000536843 ZNF211Q13398 564 aaPredicted RBP16.67■□□□□ 0.26
CHFR-213ENST00000536843 MOGSQ13724 837 aa16.67■□□□□ 0.26
CHFR-213ENST00000536843 MYBPC3Q14896 1274 aa16.67■□□□□ 0.26
CHFR-213ENST00000536843 ZRSR2Q15696 482 aaKnown RBP16.67■□□□□ 0.26
CHFR-213ENST00000536843 TMEM266Q2M3C6 531 aa16.67■□□□□ 0.26
CHFR-213ENST00000536843 TTC27Q6P3X3 843 aa16.67■□□□□ 0.26
CHFR-213ENST00000536843 HHIPL2Q6UWX4 724 aa16.67■□□□□ 0.26
CHFR-213ENST00000536843 SLC30A5Q8TAD4 765 aa16.67■□□□□ 0.26
CHFR-213ENST00000536843 ALG3Q92685 438 aa16.67■□□□□ 0.26
CHFR-213ENST00000536843 KCTD10Q9H3F6 313 aa16.67■□□□□ 0.26
CHFR-213ENST00000536843 NKIRAS1Q9NYS0 192 aa16.67■□□□□ 0.26
CHFR-213ENST00000536843 TMCO1Q9UM00 188 aa16.67■□□□□ 0.26
CHFR-213ENST00000536843 TCEA3O75764 348 aa16.66■□□□□ 0.26
CHFR-213ENST00000536843 HLA-DOAP06340 250 aa16.66■□□□□ 0.26
CHFR-213ENST00000536843 FOXN2P32314 431 aa16.66■□□□□ 0.26
CHFR-213ENST00000536843 SERPINB4P48594 390 aa16.66■□□□□ 0.26
CHFR-213ENST00000536843 GSTA3Q16772 222 aa16.66■□□□□ 0.26
CHFR-213ENST00000536843 EDRF1Q3B7T1 1238 aa16.66■□□□□ 0.26
CHFR-213ENST00000536843 LCA5Q86VQ0 697 aa16.66■□□□□ 0.26
CHFR-213ENST00000536843 OLIG1Q8TAK6 271 aa16.66■□□□□ 0.26
CHFR-213ENST00000536843 SCG3Q8WXD2 468 aaKnown RBP16.66■□□□□ 0.26
CHFR-213ENST00000536843 LNPEPQ9UIQ6 1025 aa16.66■□□□□ 0.26
CHFR-213ENST00000536843 HDAC9Q9UKV0 1011 aa16.66■□□□□ 0.26
CHFR-213ENST00000536843 PCDHAC2Q9Y5I4 1007 aa16.66■□□□□ 0.26
CHFR-213ENST00000536843 GOLGB1Q14789 3259 aaKnown RBP16.66■□□□□ 0.26
CHFR-213ENST00000536843 ANKRD31Q8N7Z5 1873 aa16.66■□□□□ 0.26
CHFR-213ENST00000536843 FAM163BP0C2L3 166 aa16.66■□□□□ 0.26
CHFR-213ENST00000536843 PTPN4P29074 926 aa16.66■□□□□ 0.26
CHFR-213ENST00000536843 KPNB1Q14974 876 aaKnown RBP16.66■□□□□ 0.26
CHFR-213ENST00000536843 EXOC3L4Q17RC7 722 aa16.66■□□□□ 0.26
CHFR-213ENST00000536843 KHDC1Q4VXA5 237 aaKnown RBP16.66■□□□□ 0.26
CHFR-213ENST00000536843 PPP1R18Q6NYC8 613 aa16.66■□□□□ 0.26
CHFR-213ENST00000536843 PPP4R3CPQ6ZMV5 832 aa16.66■□□□□ 0.26
CHFR-213ENST00000536843 C4orf50Q6ZRC1 276 aa16.66■□□□□ 0.26
CHFR-213ENST00000536843 CCNJLQ8IV13 435 aa16.66■□□□□ 0.26
CHFR-213ENST00000536843 PPP1R12CQ9BZL4 782 aa16.66■□□□□ 0.26
CHFR-213ENST00000536843 NT5C3AQ9H0P0 336 aa16.66■□□□□ 0.26
CHFR-213ENST00000536843 DBNDD1Q9H9R9 158 aa16.66■□□□□ 0.26
CHFR-213ENST00000536843 MYO3BQ8WXR4 1341 aa16.66■□□□□ 0.26
CHFR-213ENST00000536843 HNRNPCL1O60812 293 aaKnown RBP16.65■□□□□ 0.26
CHFR-213ENST00000536843 GGPS1O95749 300 aa16.65■□□□□ 0.26
CHFR-213ENST00000536843 ALDH1B1P30837 517 aa16.65■□□□□ 0.26
CHFR-213ENST00000536843 CRKP46108 304 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms