RNA–Protein interactions for RNA: ENST00000536287.2

RHBDL3-203, Transcript of rhomboid like 3, humanhuman

TSL 2 BASIC

Gene RHBDL3, Length 4,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3-203ENST00000536287 C4orf33Q8N1A6 199 aa12.68□□□□□ -0.38
RHBDL3-203ENST00000536287 GPD1LQ8N335 351 aa12.68□□□□□ -0.38
RHBDL3-203ENST00000536287 SUDS3Q9H7L9 328 aaPredicted RBP12.68□□□□□ -0.38
RHBDL3-203ENST00000536287 PCDHA10Q9Y5I2 948 aa12.68□□□□□ -0.38
RHBDL3-203ENST00000536287 TNS3Q68CZ2 1445 aa12.68□□□□□ -0.38
RHBDL3-203ENST00000536287 ITIH2P19823 946 aa12.68□□□□□ -0.38
RHBDL3-203ENST00000536287 COMTP21964 271 aa12.68□□□□□ -0.38
RHBDL3-203ENST00000536287 CDH6P55285 790 aa12.68□□□□□ -0.38
RHBDL3-203ENST00000536287 SLC29A2Q14542 456 aa12.68□□□□□ -0.38
RHBDL3-203ENST00000536287 NTRK3Q16288 839 aa12.68□□□□□ -0.38
RHBDL3-203ENST00000536287 PTGISQ16647 500 aa12.68□□□□□ -0.38
RHBDL3-203ENST00000536287 FSCBQ5H9T9 825 aa12.68□□□□□ -0.38
RHBDL3-203ENST00000536287 FAM102AQ5T9C2 384 aaPredicted RBP12.68□□□□□ -0.38
RHBDL3-203ENST00000536287 ARL8AQ96BM9 186 aa12.68□□□□□ -0.38
RHBDL3-203ENST00000536287 NBPF3Q9H094 633 aa12.68□□□□□ -0.38
RHBDL3-203ENST00000536287 PARVAQ9NVD7 372 aa12.68□□□□□ -0.38
RHBDL3-203ENST00000536287 DIP2BQ9P265 1576 aa12.67□□□□□ -0.38
RHBDL3-203ENST00000536287 TMEM253P0C7T8 217 aa12.67□□□□□ -0.38
RHBDL3-203ENST00000536287 LRRC23Q53EV4 343 aaPredicted RBP12.67□□□□□ -0.38
RHBDL3-203ENST00000536287 RABGAP1LQ5R372 815 aa12.67□□□□□ -0.38
RHBDL3-203ENST00000536287 CDKAL1Q5VV42 579 aa12.67□□□□□ -0.38
RHBDL3-203ENST00000536287 ARHGAP27Q6ZUM4 889 aa12.67□□□□□ -0.38
RHBDL3-203ENST00000536287 TRPM8Q7Z2W7 1104 aa12.67□□□□□ -0.38
RHBDL3-203ENST00000536287 LCA5Q86VQ0 697 aa12.67□□□□□ -0.38
RHBDL3-203ENST00000536287 LRRN4CLQ8ND94 238 aa12.67□□□□□ -0.38
RHBDL3-203ENST00000536287 NCAPGQ9BPX3 1015 aa12.67□□□□□ -0.38
RHBDL3-203ENST00000536287 POLR3FQ9H1D9 316 aaPredicted RBP12.67□□□□□ -0.38
RHBDL3-203ENST00000536287 TMEM120BA0PK00 339 aa12.67□□□□□ -0.38
RHBDL3-203ENST00000536287 F5H423 210 aaPredicted RBP12.67□□□□□ -0.38
RHBDL3-203ENST00000536287 M0QYV0 167 aa12.67□□□□□ -0.38
RHBDL3-203ENST00000536287 ECE2O60344 883 aa12.67□□□□□ -0.38
RHBDL3-203ENST00000536287 CAMTA2O94983 1202 aa12.67□□□□□ -0.38
RHBDL3-203ENST00000536287 COPB2P35606 906 aa12.67□□□□□ -0.38
RHBDL3-203ENST00000536287 CCNYL1Q8N7R7 359 aa12.67□□□□□ -0.38
RHBDL3-203ENST00000536287 FGD4Q96M96 766 aa12.67□□□□□ -0.38
RHBDL3-203ENST00000536287 MTRQ99707 1265 aa12.67□□□□□ -0.38
RHBDL3-203ENST00000536287 HAUS8Q9BT25 410 aa12.67□□□□□ -0.38
RHBDL3-203ENST00000536287 TBX3O15119 743 aa12.67□□□□□ -0.38
RHBDL3-203ENST00000536287 RPA1P27694 616 aa12.67□□□□□ -0.38
RHBDL3-203ENST00000536287 HSD17B3P37058 310 aa12.67□□□□□ -0.38
RHBDL3-203ENST00000536287 FXR2P51116 673 aaKnown RBP eCLIP12.67□□□□□ -0.38
RHBDL3-203ENST00000536287 ARL13BQ3SXY8 428 aa12.67□□□□□ -0.38
RHBDL3-203ENST00000536287 SPOUT1Q5T280 376 aaKnown RBP12.67□□□□□ -0.38
RHBDL3-203ENST00000536287 FBXO33Q7Z6M2 555 aa12.67□□□□□ -0.38
RHBDL3-203ENST00000536287 SEPT12Q8IYM1 358 aa12.67□□□□□ -0.38
RHBDL3-203ENST00000536287 TTLL6Q8N841 843 aa12.67□□□□□ -0.38
RHBDL3-203ENST00000536287 MDM1Q8TC05 714 aa12.67□□□□□ -0.38
RHBDL3-203ENST00000536287 CPA5Q8WXQ8 436 aa12.67□□□□□ -0.38
RHBDL3-203ENST00000536287 NDE1Q9NXR1 346 aa12.67□□□□□ -0.38
RHBDL3-203ENST00000536287 CHORDC1Q9UHD1 332 aaPredicted RBP12.67□□□□□ -0.38
RHBDL3-203ENST00000536287 SLC1A1P43005 524 aa12.66□□□□□ -0.38
RHBDL3-203ENST00000536287 DUOXA2Q1HG44 320 aa12.66□□□□□ -0.38
RHBDL3-203ENST00000536287 HEATR6Q6AI08 1181 aaKnown RBP12.66□□□□□ -0.38
RHBDL3-203ENST00000536287 LRRC31Q6UY01 552 aa12.66□□□□□ -0.38
RHBDL3-203ENST00000536287 RGS9BPQ6ZS82 235 aa12.66□□□□□ -0.38
RHBDL3-203ENST00000536287 KRT27Q7Z3Y8 459 aa12.66□□□□□ -0.38
RHBDL3-203ENST00000536287 CARD9Q9H257 536 aa12.66□□□□□ -0.38
RHBDL3-203ENST00000536287 LCMT1Q9UIC8 334 aa12.66□□□□□ -0.38
RHBDL3-203ENST00000536287 CPSF3Q9UKF6 684 aaKnown RBP12.66□□□□□ -0.38
RHBDL3-203ENST00000536287 ZHX2Q9Y6X8 837 aa12.66□□□□□ -0.38
RHBDL3-203ENST00000536287 KPNA7A9QM74 516 aa12.66□□□□□ -0.38
RHBDL3-203ENST00000536287 YWHABP31946 246 aaKnown RBP12.66□□□□□ -0.38
RHBDL3-203ENST00000536287 P3H1Q32P28 736 aa12.66□□□□□ -0.38
RHBDL3-203ENST00000536287 TMTC4Q5T4D3 741 aa12.66□□□□□ -0.38
RHBDL3-203ENST00000536287 PAPD7Q5XG87 772 aaKnown RBP12.66□□□□□ -0.38
RHBDL3-203ENST00000536287 RWDD4Q6NW29 188 aaKnown RBP12.66□□□□□ -0.38
RHBDL3-203ENST00000536287 KLC3Q6P597 504 aa12.66□□□□□ -0.38
RHBDL3-203ENST00000536287 TRIM65Q6PJ69 517 aa12.66□□□□□ -0.38
RHBDL3-203ENST00000536287 SYN2Q92777 582 aaPredicted RBP12.66□□□□□ -0.38
RHBDL3-203ENST00000536287 EXT2Q93063 718 aa12.66□□□□□ -0.38
RHBDL3-203ENST00000536287 ERP27Q96DN0 273 aa12.66□□□□□ -0.38
RHBDL3-203ENST00000536287 FAM167AQ96KS9 214 aa12.66□□□□□ -0.38
RHBDL3-203ENST00000536287 TMEM117Q9H0C3 514 aa12.66□□□□□ -0.38
RHBDL3-203ENST00000536287 FAM96AQ9H5X1 160 aa12.66□□□□□ -0.38
RHBDL3-203ENST00000536287 KBTBD4Q9NVX7 518 aa12.66□□□□□ -0.38
RHBDL3-203ENST00000536287 PITPNM2Q9BZ72 1349 aa12.66□□□□□ -0.38
RHBDL3-203ENST00000536287 GOLGA8CPA6NN73 597 aa12.66□□□□□ -0.38
RHBDL3-203ENST00000536287 ATMINO43313 823 aaPredicted RBP12.66□□□□□ -0.38
RHBDL3-203ENST00000536287 PMLP29590 882 aa12.66□□□□□ -0.38
RHBDL3-203ENST00000536287 COPS2P61201 443 aa12.66□□□□□ -0.38
RHBDL3-203ENST00000536287 ROR1Q01973 937 aa12.66□□□□□ -0.38
RHBDL3-203ENST00000536287 MTM1Q13496 603 aa12.66□□□□□ -0.38
RHBDL3-203ENST00000536287 C16orf86Q6ZW13 317 aa12.66□□□□□ -0.38
RHBDL3-203ENST00000536287 METTL23Q86XA0 190 aa12.66□□□□□ -0.38
RHBDL3-203ENST00000536287 SGSM3Q96HU1 749 aa12.66□□□□□ -0.38
RHBDL3-203ENST00000536287 JMJD4Q9H9V9 463 aa12.66□□□□□ -0.38
RHBDL3-203ENST00000536287 SUCLA2Q9P2R7 463 aaPredicted RBP12.66□□□□□ -0.38
RHBDL3-203ENST00000536287 SMG5Q9UPR3 1016 aaKnown RBP12.66□□□□□ -0.38
RHBDL3-203ENST00000536287 LMTK2Q8IWU2 1503 aa12.66□□□□□ -0.38
RHBDL3-203ENST00000536287 FAM47DPA6NHR8 397 aa12.66□□□□□ -0.38
RHBDL3-203ENST00000536287 HSPA8P11142 646 aaKnown RBP12.66□□□□□ -0.38
RHBDL3-203ENST00000536287 ADRA2BP18089 450 aa12.66□□□□□ -0.38
RHBDL3-203ENST00000536287 TYK2P29597 1187 aa12.66□□□□□ -0.38
RHBDL3-203ENST00000536287 GPC3P51654 580 aa12.66□□□□□ -0.38
RHBDL3-203ENST00000536287 AP2B1P63010 937 aa12.66□□□□□ -0.38
RHBDL3-203ENST00000536287 NFX1Q12986 1120 aaKnown RBP12.66□□□□□ -0.38
RHBDL3-203ENST00000536287 EZH2Q15910 746 aaKnown RBP12.66□□□□□ -0.38
RHBDL3-203ENST00000536287 DPY19L2Q6NUT2 758 aa12.66□□□□□ -0.38
RHBDL3-203ENST00000536287 GJB7Q6PEY0 223 aa12.66□□□□□ -0.38
RHBDL3-203ENST00000536287 KIF2BQ8N4N8 673 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms