RNA–Protein interactions for RNA: ENST00000536239.1

SKA3-207, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-207ENST00000536239 OXSMQ9NWU1 459 aa3.69□□□□□ -1.82
SKA3-207ENST00000536239 ARPP21Q9UBL0 812 aaPredicted RBP3.69□□□□□ -1.82
SKA3-207ENST00000536239 NOX1Q9Y5S8 564 aa3.69□□□□□ -1.82
SKA3-207ENST00000536239 ST20-MTHFSA0A0A6YYL1 179 aa3.68□□□□□ -1.82
SKA3-207ENST00000536239 KCNAB3O43448 404 aa3.68□□□□□ -1.82
SKA3-207ENST00000536239 OPA1O60313 960 aa3.68□□□□□ -1.82
SKA3-207ENST00000536239 EIF5BO60841 1220 aaKnown RBP3.68□□□□□ -1.82
SKA3-207ENST00000536239 RAPGEF3O95398 923 aa3.68□□□□□ -1.82
SKA3-207ENST00000536239 LTA4HP09960 611 aaKnown RBP3.68□□□□□ -1.82
SKA3-207ENST00000536239 RBM25P49756 843 aaKnown RBP3.68□□□□□ -1.82
SKA3-207ENST00000536239 ZNF460Q14592 562 aa3.68□□□□□ -1.82
SKA3-207ENST00000536239 ZBTB41Q5SVQ8 909 aa3.68□□□□□ -1.82
SKA3-207ENST00000536239 ESPNLQ6ZVH7 1005 aa3.68□□□□□ -1.82
SKA3-207ENST00000536239 MDM1Q8TC05 714 aa3.68□□□□□ -1.82
SKA3-207ENST00000536239 ACTRT2Q8TDY3 377 aa3.68□□□□□ -1.82
SKA3-207ENST00000536239 WASF1Q92558 559 aa3.68□□□□□ -1.82
SKA3-207ENST00000536239 CEP95Q96GE4 821 aa3.68□□□□□ -1.82
SKA3-207ENST00000536239 TMEM74BQ9NUR3 256 aa3.68□□□□□ -1.82
SKA3-207ENST00000536239 KLHL11Q9NVR0 708 aa3.68□□□□□ -1.82
SKA3-207ENST00000536239 TBCCD1Q9NVR7 557 aa3.68□□□□□ -1.82
SKA3-207ENST00000536239 ASB6Q9NWX5 421 aa3.68□□□□□ -1.82
SKA3-207ENST00000536239 WIPF3A6NGB9 483 aa3.67□□□□□ -1.82
SKA3-207ENST00000536239 ITGA10O75578 1167 aa3.67□□□□□ -1.82
SKA3-207ENST00000536239 DNAJC8O75937 253 aaPredicted RBP3.67□□□□□ -1.82
SKA3-207ENST00000536239 ONECUT2O95948 504 aa3.67□□□□□ -1.82
SKA3-207ENST00000536239 SERINC3Q13530 473 aa3.67□□□□□ -1.82
SKA3-207ENST00000536239 LRRC32Q14392 662 aa3.67□□□□□ -1.82
SKA3-207ENST00000536239 C19orf54Q5BKX5 351 aa3.67□□□□□ -1.82
SKA3-207ENST00000536239 ATXN7L2Q5T6C5 722 aaPredicted RBP3.67□□□□□ -1.82
SKA3-207ENST00000536239 KIAA1614Q5VZ46 1190 aa3.67□□□□□ -1.82
SKA3-207ENST00000536239 TSHZ3Q63HK5 1081 aa3.67□□□□□ -1.82
SKA3-207ENST00000536239 UBE2R2Q712K3 238 aaPredicted RBP3.67□□□□□ -1.82
SKA3-207ENST00000536239 GRASPQ7Z6J2 395 aaPredicted RBP3.67□□□□□ -1.82
SKA3-207ENST00000536239 BOD1Q96IK1 185 aa3.67□□□□□ -1.82
SKA3-207ENST00000536239 ZNF496Q96IT1 587 aaPredicted RBP3.67□□□□□ -1.82
SKA3-207ENST00000536239 PHACTR3Q96KR7 559 aa3.67□□□□□ -1.82
SKA3-207ENST00000536239 KRTAP2-2Q9BYT5 123 aa3.67□□□□□ -1.82
SKA3-207ENST00000536239 IL17RBQ9NRM6 502 aa3.67□□□□□ -1.82
SKA3-207ENST00000536239 SNTG2Q9NY99 539 aa3.67□□□□□ -1.82
SKA3-207ENST00000536239 H2AFY2Q9P0M6 372 aaPredicted RBP3.67□□□□□ -1.82
SKA3-207ENST00000536239 PRAMEF4O60810 478 aa3.66□□□□□ -1.82
SKA3-207ENST00000536239 CELA2AP08217 269 aa3.66□□□□□ -1.82
SKA3-207ENST00000536239 ATP2A2P16615 1042 aaKnown RBP3.66□□□□□ -1.82
SKA3-207ENST00000536239 FNDC3BQ53EP0 1204 aaKnown RBP3.66□□□□□ -1.82
SKA3-207ENST00000536239 MFSD14BQ5SR56 506 aa3.66□□□□□ -1.82
SKA3-207ENST00000536239 AKNAD1Q5T1N1 836 aa3.66□□□□□ -1.82
SKA3-207ENST00000536239 CDCA2Q69YH5 1023 aaPredicted RBP3.66□□□□□ -1.82
SKA3-207ENST00000536239 ABHD15Q6UXT9 468 aa3.66□□□□□ -1.82
SKA3-207ENST00000536239 PDZD4Q76G19 769 aaPredicted RBP3.66□□□□□ -1.82
SKA3-207ENST00000536239 PTF1AQ7RTS3 328 aa3.66□□□□□ -1.82
SKA3-207ENST00000536239 GLB1L2Q8IW92 636 aa3.66□□□□□ -1.82
SKA3-207ENST00000536239 FAM43AQ8N2R8 423 aa3.66□□□□□ -1.82
SKA3-207ENST00000536239 SNX33Q8WV41 574 aa3.66□□□□□ -1.82
SKA3-207ENST00000536239 RNF31Q96EP0 1072 aa3.66□□□□□ -1.82
SKA3-207ENST00000536239 UROC1Q96N76 676 aa3.66□□□□□ -1.82
SKA3-207ENST00000536239 HEPHQ9BQS7 1158 aa3.66□□□□□ -1.82
SKA3-207ENST00000536239 AIFM2Q9BRQ8 373 aa3.66□□□□□ -1.82
SKA3-207ENST00000536239 GALNT9Q9HCQ5 603 aa3.66□□□□□ -1.82
SKA3-207ENST00000536239 MSRAQ9UJ68 235 aa3.66□□□□□ -1.82
SKA3-207ENST00000536239 A0A1B0GTW7 788 aa3.65□□□□□ -1.83
SKA3-207ENST00000536239 PRSS38A1L453 326 aa3.65□□□□□ -1.83
SKA3-207ENST00000536239 PJA2O43164 708 aa3.65□□□□□ -1.83
SKA3-207ENST00000536239 GASTP01350 101 aa3.65□□□□□ -1.83
SKA3-207ENST00000536239 JMJD7P0C870 316 aa3.65□□□□□ -1.83
SKA3-207ENST00000536239 FLT3P36888 993 aa3.65□□□□□ -1.83
SKA3-207ENST00000536239 CLRN1P58418 232 aa3.65□□□□□ -1.83
SKA3-207ENST00000536239 CXADRP78310 365 aa3.65□□□□□ -1.83
SKA3-207ENST00000536239 MEF2AQ02078 507 aaPredicted RBP3.65□□□□□ -1.83
SKA3-207ENST00000536239 PDPRQ8NCN5 879 aa3.65□□□□□ -1.83
SKA3-207ENST00000536239 SLC35B2Q8TB61 432 aa3.65□□□□□ -1.83
SKA3-207ENST00000536239 DDB2Q92466 427 aa3.65□□□□□ -1.83
SKA3-207ENST00000536239 ZBTB9Q96C00 473 aa3.65□□□□□ -1.83
SKA3-207ENST00000536239 ZSWIM1Q9BR11 485 aa3.65□□□□□ -1.83
SKA3-207ENST00000536239 GPRC5DQ9NZD1 345 aa3.65□□□□□ -1.83
SKA3-207ENST00000536239 EVLQ9UI08 416 aaPredicted RBP3.65□□□□□ -1.83
SKA3-207ENST00000536239 TMPRSS11EQ9UL52 423 aa3.65□□□□□ -1.83
SKA3-207ENST00000536239 PTCH2Q9Y6C5 1203 aa3.65□□□□□ -1.83
SKA3-207ENST00000536239 NUMBLQ9Y6R0 609 aa3.65□□□□□ -1.83
SKA3-207ENST00000536239 TMEM127O75204 238 aa3.64□□□□□ -1.83
SKA3-207ENST00000536239 FLT3LGP49771 235 aa3.64□□□□□ -1.83
SKA3-207ENST00000536239 PPARAQ07869 468 aa3.64□□□□□ -1.83
SKA3-207ENST00000536239 SRSF7Q16629 238 aaKnown RBP eCLIP3.64□□□□□ -1.83
SKA3-207ENST00000536239 C2orf27AQ580R0 203 aa3.64□□□□□ -1.83
SKA3-207ENST00000536239 FAM47AQ5JRC9 791 aa3.64□□□□□ -1.83
SKA3-207ENST00000536239 PRAMEF14Q5SWL7 426 aa3.64□□□□□ -1.83
SKA3-207ENST00000536239 MED25Q71SY5 747 aa3.64□□□□□ -1.83
SKA3-207ENST00000536239 PASD1Q8IV76 773 aa3.64□□□□□ -1.83
SKA3-207ENST00000536239 DPF1Q92782 380 aa3.64□□□□□ -1.83
SKA3-207ENST00000536239 ZNF428Q96B54 188 aa3.64□□□□□ -1.83
SKA3-207ENST00000536239 NACC2Q96BF6 587 aa3.64□□□□□ -1.83
SKA3-207ENST00000536239 TIMP4Q99727 224 aa3.64□□□□□ -1.83
SKA3-207ENST00000536239 ANP32EQ9BTT0 268 aa3.64□□□□□ -1.83
SKA3-207ENST00000536239 IFT57Q9NWB7 429 aa3.64□□□□□ -1.83
SKA3-207ENST00000536239 KCTD5Q9NXV2 234 aa3.64□□□□□ -1.83
SKA3-207ENST00000536239 PRSS50Q9UI38 385 aa3.64□□□□□ -1.83
SKA3-207ENST00000536239 DMTF1Q9Y222 760 aa3.64□□□□□ -1.83
SKA3-207ENST00000536239 ZKSCAN5Q9Y2L8 839 aa3.64□□□□□ -1.83
SKA3-207ENST00000536239 CXorf49A8MYA2 514 aaPredicted RBP3.63□□□□□ -1.83
SKA3-207ENST00000536239 CRHR1P34998 444 aa3.63□□□□□ -1.83
SKA3-207ENST00000536239 EZH2Q15910 746 aaKnown RBP3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms