RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 ATL2Q8NHH9 583 aa14.97□□□□□ -0.01
LIG1-203ENST00000536218 IL31RAQ8NI17 732 aa14.97□□□□□ -0.01
LIG1-203ENST00000536218 DNAJC9Q8WXX5 260 aa14.97□□□□□ -0.01
LIG1-203ENST00000536218 ZBED3Q96IU2 234 aaPredicted RBP14.97□□□□□ -0.01
LIG1-203ENST00000536218 NUDCD1Q96RS6 583 aa14.97□□□□□ -0.01
LIG1-203ENST00000536218 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.97□□□□□ -0.01
LIG1-203ENST00000536218 KCTD10Q9H3F6 313 aa14.97□□□□□ -0.01
LIG1-203ENST00000536218 ARHGEF3Q9NR81 526 aa14.97□□□□□ -0.01
LIG1-203ENST00000536218 SCOCQ9UIL1 159 aa14.97□□□□□ -0.01
LIG1-203ENST00000536218 COL2A1P02458 1487 aaPredicted RBP14.97□□□□□ -0.01
LIG1-203ENST00000536218 CETN3O15182 167 aa14.97□□□□□ -0.01
LIG1-203ENST00000536218 RGS16O15492 202 aaPredicted RBP14.97□□□□□ -0.01
LIG1-203ENST00000536218 SUN1O94901 812 aa14.97□□□□□ -0.01
LIG1-203ENST00000536218 SERPINB4P48594 390 aa14.97□□□□□ -0.01
LIG1-203ENST00000536218 KCNMA1Q12791 1236 aa14.97□□□□□ -0.01
LIG1-203ENST00000536218 MYBPC3Q14896 1274 aa14.97□□□□□ -0.01
LIG1-203ENST00000536218 HOOK3Q86VS8 718 aa14.97□□□□□ -0.01
LIG1-203ENST00000536218 TEPSINQ96N21 525 aa14.97□□□□□ -0.01
LIG1-203ENST00000536218 INPP4AQ96PE3 977 aaPredicted RBP14.97□□□□□ -0.01
LIG1-203ENST00000536218 NDNQ99608 321 aa14.97□□□□□ -0.01
LIG1-203ENST00000536218 SYNPO2Q9UMS6 1093 aa14.97□□□□□ -0.01
LIG1-203ENST00000536218 IPO5O00410 1097 aaKnown RBP14.96□□□□□ -0.01
LIG1-203ENST00000536218 PSMD10O75832 226 aa14.96□□□□□ -0.01
LIG1-203ENST00000536218 FAM13AO94988 1023 aa14.96□□□□□ -0.01
LIG1-203ENST00000536218 EIF2AK2P19525 551 aaKnown RBP14.96□□□□□ -0.01
LIG1-203ENST00000536218 NMT1P30419 496 aaKnown RBP14.96□□□□□ -0.01
LIG1-203ENST00000536218 PEX5P50542 639 aa14.96□□□□□ -0.01
LIG1-203ENST00000536218 TMEM62Q0P6H9 643 aa14.96□□□□□ -0.01
LIG1-203ENST00000536218 BNIP1Q12981 228 aa14.96□□□□□ -0.01
LIG1-203ENST00000536218 ZC2HC1CQ53FD0 456 aaPredicted RBP14.96□□□□□ -0.01
LIG1-203ENST00000536218 RINT1Q6NUQ1 792 aa14.96□□□□□ -0.01
LIG1-203ENST00000536218 ANKRD23Q86SG2 305 aa14.96□□□□□ -0.01
LIG1-203ENST00000536218 CENPTQ96BT3 561 aa14.96□□□□□ -0.01
LIG1-203ENST00000536218 PBKQ96KB5 322 aa14.96□□□□□ -0.01
LIG1-203ENST00000536218 HSD17B14Q9BPX1 270 aa14.96□□□□□ -0.01
LIG1-203ENST00000536218 LSM14BQ9BX40 385 aaKnown RBP14.96□□□□□ -0.01
LIG1-203ENST00000536218 CELF4Q9BZC1 486 aaKnown RBP14.96□□□□□ -0.01
LIG1-203ENST00000536218 WDR11Q9BZH6 1224 aa14.96□□□□□ -0.01
LIG1-203ENST00000536218 UNC45AQ9H3U1 944 aa14.96□□□□□ -0.01
LIG1-203ENST00000536218 WRAP73Q9P2S5 460 aaPredicted RBP14.96□□□□□ -0.01
LIG1-203ENST00000536218 GRID2IPA4D2P6 1211 aa14.96□□□□□ -0.01
LIG1-203ENST00000536218 EYA4O95677 639 aa14.96□□□□□ -0.01
LIG1-203ENST00000536218 MYCLP12524 364 aaPredicted RBP14.96□□□□□ -0.01
LIG1-203ENST00000536218 PDE6CP51160 858 aa14.96□□□□□ -0.01
LIG1-203ENST00000536218 CCNG1P51959 295 aa14.96□□□□□ -0.01
LIG1-203ENST00000536218 POLR2FP61218 127 aaKnown RBP14.96□□□□□ -0.01
LIG1-203ENST00000536218 DCAF17Q5H9S7 520 aaPredicted RBP14.96□□□□□ -0.01
LIG1-203ENST00000536218 RASIP1Q5U651 963 aa14.96□□□□□ -0.01
LIG1-203ENST00000536218 OPTNQ96CV9 577 aa14.96□□□□□ -0.01
LIG1-203ENST00000536218 MOV10L1Q9BXT6 1211 aaKnown RBP14.96□□□□□ -0.01
LIG1-203ENST00000536218 EHMT1Q9H9B1 1298 aa14.96□□□□□ -0.01
LIG1-203ENST00000536218 RNPEPL1Q9HAU8 725 aa14.96□□□□□ -0.01
LIG1-203ENST00000536218 TCP11X1B4DZS4 312 aa14.95□□□□□ -0.02
LIG1-203ENST00000536218 ITGB5P18084 799 aa14.95□□□□□ -0.02
LIG1-203ENST00000536218 CALB2P22676 271 aa14.95□□□□□ -0.02
LIG1-203ENST00000536218 PTGER2P43116 358 aa14.95□□□□□ -0.02
LIG1-203ENST00000536218 CDK17Q00537 523 aa14.95□□□□□ -0.02
LIG1-203ENST00000536218 TNFAIP1Q13829 316 aa14.95□□□□□ -0.02
LIG1-203ENST00000536218 NSMFQ6X4W1 530 aa14.95□□□□□ -0.02
LIG1-203ENST00000536218 TLCD1Q96CP7 247 aa14.95□□□□□ -0.02
LIG1-203ENST00000536218 DTNBP1Q96EV8 351 aa14.95□□□□□ -0.02
LIG1-203ENST00000536218 GBP5Q96PP8 586 aa14.95□□□□□ -0.02
LIG1-203ENST00000536218 POLR3CQ9BUI4 534 aaPredicted RBP14.95□□□□□ -0.02
LIG1-203ENST00000536218 VPS33BQ9H267 617 aa14.95□□□□□ -0.02
LIG1-203ENST00000536218 PCDHB13Q9Y5F0 798 aa14.95□□□□□ -0.02
LIG1-203ENST00000536218 ZNF536O15090 1300 aa14.95□□□□□ -0.02
LIG1-203ENST00000536218 PITPNM2Q9BZ72 1349 aa14.95□□□□□ -0.02
LIG1-203ENST00000536218 SMAPO00193 183 aa14.95□□□□□ -0.02
LIG1-203ENST00000536218 KLRC1P26715 233 aa14.95□□□□□ -0.02
LIG1-203ENST00000536218 PRELPP51888 382 aa14.95□□□□□ -0.02
LIG1-203ENST00000536218 RCN2Q14257 317 aa14.95□□□□□ -0.02
LIG1-203ENST00000536218 RPS6KA1Q15418 735 aa14.95□□□□□ -0.02
LIG1-203ENST00000536218 KNOP1Q1ED39 458 aaKnown RBP14.95□□□□□ -0.02
LIG1-203ENST00000536218 CCNJLQ8IV13 435 aa14.95□□□□□ -0.02
LIG1-203ENST00000536218 TRIM7Q9C029 511 aa14.95□□□□□ -0.02
LIG1-203ENST00000536218 RMI1Q9H9A7 625 aa14.95□□□□□ -0.02
LIG1-203ENST00000536218 USH1CQ9Y6N9 552 aa14.95□□□□□ -0.02
LIG1-203ENST00000536218 KRIT1O00522 736 aa14.95□□□□□ -0.02
LIG1-203ENST00000536218 TTI1O43156 1089 aa14.95□□□□□ -0.02
LIG1-203ENST00000536218 ICAM1P05362 532 aa14.95□□□□□ -0.02
LIG1-203ENST00000536218 HOXD13P35453 343 aa14.95□□□□□ -0.02
LIG1-203ENST00000536218 FITM2Q8N6M3 262 aa14.95□□□□□ -0.02
LIG1-203ENST00000536218 PFDN1O60925 122 aa14.94□□□□□ -0.02
LIG1-203ENST00000536218 GNAZP19086 355 aa14.94□□□□□ -0.02
LIG1-203ENST00000536218 GSTT1P30711 240 aa14.94□□□□□ -0.02
LIG1-203ENST00000536218 CASP4P49662 377 aa14.94□□□□□ -0.02
LIG1-203ENST00000536218 KCNH2Q12809 1159 aa14.94□□□□□ -0.02
LIG1-203ENST00000536218 SGSM1Q2NKQ1 1148 aa14.94□□□□□ -0.02
LIG1-203ENST00000536218 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.94□□□□□ -0.02
LIG1-203ENST00000536218 SLC5A5Q92911 643 aa14.94□□□□□ -0.02
LIG1-203ENST00000536218 PHACTR1Q9C0D0 580 aa14.94□□□□□ -0.02
LIG1-203ENST00000536218 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.94□□□□□ -0.02
LIG1-203ENST00000536218 OATP04181 439 aa14.94□□□□□ -0.02
LIG1-203ENST00000536218 ACTN1P12814 892 aa14.94□□□□□ -0.02
LIG1-203ENST00000536218 PTDSS1P48651 473 aaKnown RBP14.94□□□□□ -0.02
LIG1-203ENST00000536218 FOXB2Q5VYV0 432 aa14.94□□□□□ -0.02
LIG1-203ENST00000536218 GBP7Q8N8V2 638 aaPredicted RBP14.94□□□□□ -0.02
LIG1-203ENST00000536218 WNK4Q96J92 1243 aa14.94□□□□□ -0.02
LIG1-203ENST00000536218 CEP63Q96MT8 703 aa14.94□□□□□ -0.02
LIG1-203ENST00000536218 ANKRD27Q96NW4 1050 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 112.2 ms