RNA–Protein interactions for RNA: ENST00000536212.1

VPS33A-203, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-203ENST00000536212 ITGB3BPQ13352 177 aaPredicted RBP6.22□□□□□ -1.41
VPS33A-203ENST00000536212 PICALMQ13492 652 aa6.22□□□□□ -1.41
VPS33A-203ENST00000536212 GRIN2CQ14957 1233 aa6.22□□□□□ -1.41
VPS33A-203ENST00000536212 TCEAL1Q15170 157 aa6.22□□□□□ -1.41
VPS33A-203ENST00000536212 EXOC3L4Q17RC7 722 aa6.22□□□□□ -1.41
VPS33A-203ENST00000536212 ARSJQ5FYB0 599 aaPredicted RBP6.22□□□□□ -1.41
VPS33A-203ENST00000536212 LDLRAD1Q5T700 205 aa6.22□□□□□ -1.41
VPS33A-203ENST00000536212 AGBL2Q5U5Z8 902 aa6.22□□□□□ -1.41
VPS33A-203ENST00000536212 SLFN13Q68D06 897 aa6.22□□□□□ -1.41
VPS33A-203ENST00000536212 CDC42EP5Q6NZY7 148 aa6.22□□□□□ -1.41
VPS33A-203ENST00000536212 ALKBH5Q6P6C2 394 aaKnown RBP6.22□□□□□ -1.41
VPS33A-203ENST00000536212 USP17L6PQ6QN14 398 aa6.22□□□□□ -1.41
VPS33A-203ENST00000536212 BTNL9Q6UXG8 535 aa6.22□□□□□ -1.41
VPS33A-203ENST00000536212 C1orf229Q6ZS94 237 aaPredicted RBP6.22□□□□□ -1.41
VPS33A-203ENST00000536212 KCTD1Q719H9 257 aa6.22□□□□□ -1.41
VPS33A-203ENST00000536212 H2AFVQ71UI9 128 aa6.22□□□□□ -1.41
VPS33A-203ENST00000536212 YTHDF3Q7Z739 585 aaKnown RBP6.22□□□□□ -1.41
VPS33A-203ENST00000536212 NT5DC3Q86UY8 548 aa6.22□□□□□ -1.41
VPS33A-203ENST00000536212 SIAH1Q8IUQ4 282 aa6.22□□□□□ -1.41
VPS33A-203ENST00000536212 SYCE1Q8N0S2 351 aa6.22□□□□□ -1.41
VPS33A-203ENST00000536212 ARFGAP2Q8N6H7 521 aa6.22□□□□□ -1.41
VPS33A-203ENST00000536212 C3orf20Q8ND61 904 aa6.22□□□□□ -1.41
VPS33A-203ENST00000536212 LMBR1Q8WVP7 490 aa6.22□□□□□ -1.41
VPS33A-203ENST00000536212 SLC35C1Q96A29 364 aa6.22□□□□□ -1.41
VPS33A-203ENST00000536212 LRRC45Q96CN5 670 aa6.22□□□□□ -1.41
VPS33A-203ENST00000536212 HSH2DQ96JZ2 352 aa6.22□□□□□ -1.41
VPS33A-203ENST00000536212 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.22□□□□□ -1.41
VPS33A-203ENST00000536212 REEP2Q9BRK0 252 aa6.22□□□□□ -1.41
VPS33A-203ENST00000536212 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.22□□□□□ -1.41
VPS33A-203ENST00000536212 CFHR5Q9BXR6 569 aa6.22□□□□□ -1.41
VPS33A-203ENST00000536212 TXLNGYQ9BZA5 131 aa6.22□□□□□ -1.41
VPS33A-203ENST00000536212 EPN3Q9H201 632 aa6.22□□□□□ -1.41
VPS33A-203ENST00000536212 PLEKHA4Q9H4M7 779 aa6.22□□□□□ -1.41
VPS33A-203ENST00000536212 SLITRK6Q9H5Y7 841 aa6.22□□□□□ -1.41
VPS33A-203ENST00000536212 DNAJC18Q9H819 358 aa6.22□□□□□ -1.41
VPS33A-203ENST00000536212 KANSL2Q9H9L4 492 aa6.22□□□□□ -1.41
VPS33A-203ENST00000536212 OLFML3Q9NRN5 406 aa6.22□□□□□ -1.41
VPS33A-203ENST00000536212 GDF2Q9UK05 429 aaPredicted RBP6.22□□□□□ -1.41
VPS33A-203ENST00000536212 AJAP1Q9UKB5 411 aaPredicted RBP6.22□□□□□ -1.41
VPS33A-203ENST00000536212 VAV3Q9UKW4 847 aa6.22□□□□□ -1.41
VPS33A-203ENST00000536212 SYNPO2Q9UMS6 1093 aa6.22□□□□□ -1.41
VPS33A-203ENST00000536212 DNM3Q9UQ16 869 aa6.22□□□□□ -1.41
VPS33A-203ENST00000536212 PCDHA1Q9Y5I3 950 aa6.22□□□□□ -1.41
VPS33A-203ENST00000536212 FAM169AQ9Y6X4 670 aa6.22□□□□□ -1.41
VPS33A-203ENST00000536212 TAF1LQ8IZX4 1826 aa6.22□□□□□ -1.41
VPS33A-203ENST00000536212 ASTN1O14525 1302 aa6.22□□□□□ -1.41
VPS33A-203ENST00000536212 NCANO14594 1321 aa6.22□□□□□ -1.41
VPS33A-203ENST00000536212 UBE4BO95155 1302 aa6.22□□□□□ -1.41
VPS33A-203ENST00000536212 ESYT3A0FGR9 886 aa6.21□□□□□ -1.42
VPS33A-203ENST00000536212 TLDC2A0PJX2 215 aa6.21□□□□□ -1.42
VPS33A-203ENST00000536212 PGRMC1O00264 195 aaKnown RBP6.21□□□□□ -1.42
VPS33A-203ENST00000536212 POLRMTO00411 1230 aaKnown RBP6.21□□□□□ -1.42
VPS33A-203ENST00000536212 PIK3R2O00459 728 aa6.21□□□□□ -1.42
VPS33A-203ENST00000536212 KCNK3O14649 394 aa6.21□□□□□ -1.42
VPS33A-203ENST00000536212 SART1O43290 800 aaKnown RBP6.21□□□□□ -1.42
VPS33A-203ENST00000536212 TGFB1I1O43294 461 aa6.21□□□□□ -1.42
VPS33A-203ENST00000536212 CEP104O60308 925 aa6.21□□□□□ -1.42
VPS33A-203ENST00000536212 FSBPO95073 299 aa6.21□□□□□ -1.42
VPS33A-203ENST00000536212 KRT14P02533 472 aa6.21□□□□□ -1.42
VPS33A-203ENST00000536212 KRT18P05783 430 aaKnown RBP6.21□□□□□ -1.42
VPS33A-203ENST00000536212 PAEPP09466 180 aa6.21□□□□□ -1.42
VPS33A-203ENST00000536212 TMEM253P0C7T8 217 aa6.21□□□□□ -1.42
VPS33A-203ENST00000536212 XRCC5P13010 732 aaKnown RBP6.21□□□□□ -1.42
VPS33A-203ENST00000536212 EEF2P13639 858 aaKnown RBP6.21□□□□□ -1.42
VPS33A-203ENST00000536212 NR1D1P20393 614 aa6.21□□□□□ -1.42
VPS33A-203ENST00000536212 MUTP22033 750 aa6.21□□□□□ -1.42
VPS33A-203ENST00000536212 MSX1P28360 303 aa6.21□□□□□ -1.42
VPS33A-203ENST00000536212 HSD17B3P37058 310 aa6.21□□□□□ -1.42
VPS33A-203ENST00000536212 MDH1P40925 334 aaKnown RBP6.21□□□□□ -1.42
VPS33A-203ENST00000536212 STAT1P42224 750 aa6.21□□□□□ -1.42
VPS33A-203ENST00000536212 EPS15P42566 896 aa6.21□□□□□ -1.42
VPS33A-203ENST00000536212 SSR1P43307 286 aaKnown RBP6.21□□□□□ -1.42
VPS33A-203ENST00000536212 FNTAP49354 379 aa6.21□□□□□ -1.42
VPS33A-203ENST00000536212 IDH3AP50213 366 aa6.21□□□□□ -1.42
VPS33A-203ENST00000536212 HADHBP55084 474 aaKnown RBP6.21□□□□□ -1.42
VPS33A-203ENST00000536212 PSMC6P62333 389 aa6.21□□□□□ -1.42
VPS33A-203ENST00000536212 PPATQ06203 517 aa6.21□□□□□ -1.42
VPS33A-203ENST00000536212 DDR1Q08345 913 aa6.21□□□□□ -1.42
VPS33A-203ENST00000536212 PDCLQ13371 301 aa6.21□□□□□ -1.42
VPS33A-203ENST00000536212 BIRC3Q13489 604 aa6.21□□□□□ -1.42
VPS33A-203ENST00000536212 TRADDQ15628 312 aa6.21□□□□□ -1.42
VPS33A-203ENST00000536212 UAP1Q16222 522 aaPredicted RBP6.21□□□□□ -1.42
VPS33A-203ENST00000536212 PPP2R5EQ16537 467 aa6.21□□□□□ -1.42
VPS33A-203ENST00000536212 PTGISQ16647 500 aa6.21□□□□□ -1.42
VPS33A-203ENST00000536212 TATDN1Q6P1N9 297 aa6.21□□□□□ -1.42
VPS33A-203ENST00000536212 C6orf89Q6UWU4 347 aa6.21□□□□□ -1.42
VPS33A-203ENST00000536212 FMNL3Q8IVF7 1028 aa6.21□□□□□ -1.42
VPS33A-203ENST00000536212 SH2D3CQ8N5H7 860 aa6.21□□□□□ -1.42
VPS33A-203ENST00000536212 ZNF280CQ8ND82 737 aa6.21□□□□□ -1.42
VPS33A-203ENST00000536212 GMCL1P1Q8NEA9 526 aa6.21□□□□□ -1.42
VPS33A-203ENST00000536212 HES6Q96HZ4 224 aa6.21□□□□□ -1.42
VPS33A-203ENST00000536212 ZDHHC15Q96MV8 337 aa6.21□□□□□ -1.42
VPS33A-203ENST00000536212 SPAG5Q96R06 1193 aa6.21□□□□□ -1.42
VPS33A-203ENST00000536212 ZIC5Q96T25 663 aa6.21□□□□□ -1.42
VPS33A-203ENST00000536212 GAS2L1Q99501 681 aaPredicted RBP6.21□□□□□ -1.42
VPS33A-203ENST00000536212 AMNQ9BXJ7 453 aa6.21□□□□□ -1.42
VPS33A-203ENST00000536212 IDI2Q9BXS1 227 aa6.21□□□□□ -1.42
VPS33A-203ENST00000536212 STK33Q9BYT3 514 aa6.21□□□□□ -1.42
VPS33A-203ENST00000536212 NIF3L1Q9GZT8 377 aa6.21□□□□□ -1.42
VPS33A-203ENST00000536212 SUV39H2Q9H5I1 410 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms