RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 EIF5BO60841 1220 aaKnown RBP12.43□□□□□ -0.42
CLSTN3-206ENST00000535668 RPA1P27694 616 aa12.43□□□□□ -0.42
CLSTN3-206ENST00000535668 OR1G1P47890 313 aa12.43□□□□□ -0.42
CLSTN3-206ENST00000535668 STARD6P59095 220 aa12.43□□□□□ -0.42
CLSTN3-206ENST00000535668 CYP4A11Q02928 519 aa12.43□□□□□ -0.42
CLSTN3-206ENST00000535668 STK3Q13188 491 aa12.43□□□□□ -0.42
CLSTN3-206ENST00000535668 HTR4Q13639 388 aa12.43□□□□□ -0.42
CLSTN3-206ENST00000535668 CALCRLQ16602 461 aa12.43□□□□□ -0.42
CLSTN3-206ENST00000535668 NCAPH2Q6IBW4 605 aa12.43□□□□□ -0.42
CLSTN3-206ENST00000535668 NSUN7Q8NE18 718 aaKnown RBP12.43□□□□□ -0.42
CLSTN3-206ENST00000535668 NACC1Q96RE7 527 aa12.43□□□□□ -0.42
CLSTN3-206ENST00000535668 MYADMQ96S97 322 aa12.43□□□□□ -0.42
CLSTN3-206ENST00000535668 OSBPL6Q9BZF3 934 aa12.43□□□□□ -0.42
CLSTN3-206ENST00000535668 CCDC113Q9H0I3 377 aa12.43□□□□□ -0.42
CLSTN3-206ENST00000535668 C2orf40Q9H1Z8 148 aa12.43□□□□□ -0.42
CLSTN3-206ENST00000535668 MFSD1Q9H3U5 465 aa12.43□□□□□ -0.42
CLSTN3-206ENST00000535668 PRG3Q9Y2Y8 225 aaPredicted RBP12.43□□□□□ -0.42
CLSTN3-206ENST00000535668 HES2Q9Y543 173 aa12.43□□□□□ -0.42
CLSTN3-206ENST00000535668 FRYLO94915 3013 aa12.43□□□□□ -0.42
CLSTN3-206ENST00000535668 DMXL1Q9Y485 3027 aa12.43□□□□□ -0.42
CLSTN3-206ENST00000535668 FAM205CA6NFA0 338 aa12.42□□□□□ -0.42
CLSTN3-206ENST00000535668 BTBD18B2RXH4 712 aa12.42□□□□□ -0.42
CLSTN3-206ENST00000535668 ACKR2O00590 384 aa12.42□□□□□ -0.42
CLSTN3-206ENST00000535668 NEMFO60524 1076 aa12.42□□□□□ -0.42
CLSTN3-206ENST00000535668 RFPL2O75678 378 aa12.42□□□□□ -0.42
CLSTN3-206ENST00000535668 HSP90AA2PQ14568 343 aaPredicted RBP12.42□□□□□ -0.42
CLSTN3-206ENST00000535668 ANGPT1Q15389 498 aa12.42□□□□□ -0.42
CLSTN3-206ENST00000535668 ME3Q16798 604 aa12.42□□□□□ -0.42
CLSTN3-206ENST00000535668 XKR4Q5GH76 650 aa12.42□□□□□ -0.42
CLSTN3-206ENST00000535668 RSPO2Q6UXX9 243 aaPredicted RBP12.42□□□□□ -0.42
CLSTN3-206ENST00000535668 MAMSTRQ6ZN01 415 aa12.42□□□□□ -0.42
CLSTN3-206ENST00000535668 CATSPER3Q86XQ3 398 aa12.42□□□□□ -0.42
CLSTN3-206ENST00000535668 LNX1Q8TBB1 728 aaPredicted RBP12.42□□□□□ -0.42
CLSTN3-206ENST00000535668 SMG7Q92540 1137 aaKnown RBP12.42□□□□□ -0.42
CLSTN3-206ENST00000535668 KCNN1Q92952 543 aa12.42□□□□□ -0.42
CLSTN3-206ENST00000535668 CLSTN3Q9BQT9 956 aa12.42□□□□□ -0.42
CLSTN3-206ENST00000535668 KCNH3Q9ULD8 1083 aa12.42□□□□□ -0.42
CLSTN3-206ENST00000535668 F8W810 466 aa12.41□□□□□ -0.42
CLSTN3-206ENST00000535668 PTGESO14684 152 aa12.41□□□□□ -0.42
CLSTN3-206ENST00000535668 B4GALT5O43286 388 aa12.41□□□□□ -0.42
CLSTN3-206ENST00000535668 MARCH6O60337 910 aa12.41□□□□□ -0.42
CLSTN3-206ENST00000535668 CYP11B2P19099 503 aa12.41□□□□□ -0.42
CLSTN3-206ENST00000535668 FGFR3P22607 806 aa12.41□□□□□ -0.42
CLSTN3-206ENST00000535668 CA8P35219 290 aa12.41□□□□□ -0.42
CLSTN3-206ENST00000535668 NAMPTP43490 491 aa12.41□□□□□ -0.42
CLSTN3-206ENST00000535668 EFNA5P52803 228 aa12.41□□□□□ -0.42
CLSTN3-206ENST00000535668 RAB33AQ14088 237 aa12.41□□□□□ -0.42
CLSTN3-206ENST00000535668 ZNF528Q3MIS6 628 aa12.41□□□□□ -0.42
CLSTN3-206ENST00000535668 RTP2Q5QGT7 225 aa12.41□□□□□ -0.42
CLSTN3-206ENST00000535668 DIS3L2Q8IYB7 885 aaKnown RBP12.41□□□□□ -0.42
CLSTN3-206ENST00000535668 SIX5Q8N196 739 aa12.41□□□□□ -0.42
CLSTN3-206ENST00000535668 DOCK6Q96HP0 2047 aa12.41□□□□□ -0.42
CLSTN3-206ENST00000535668 CPB2Q96IY4 423 aa12.41□□□□□ -0.42
CLSTN3-206ENST00000535668 LARP6Q9BRS8 491 aaKnown RBP12.41□□□□□ -0.42
CLSTN3-206ENST00000535668 TTPALQ9BTX7 342 aa12.41□□□□□ -0.42
CLSTN3-206ENST00000535668 TRIM6Q9C030 488 aaPredicted RBP12.41□□□□□ -0.42
CLSTN3-206ENST00000535668 BACE2Q9Y5Z0 518 aa12.41□□□□□ -0.42
CLSTN3-206ENST00000535668 WNT7AO00755 349 aa12.4□□□□□ -0.42
CLSTN3-206ENST00000535668 N4BP3O15049 544 aa12.4□□□□□ -0.42
CLSTN3-206ENST00000535668 MICAL2O94851 1124 aa12.4□□□□□ -0.42
CLSTN3-206ENST00000535668 SSBP05455 408 aaKnown RBP eCLIP12.4□□□□□ -0.42
CLSTN3-206ENST00000535668 THP07101 528 aa12.4□□□□□ -0.42
CLSTN3-206ENST00000535668 MAGEA9P43362 315 aa12.4□□□□□ -0.42
CLSTN3-206ENST00000535668 TRAPPC10P48553 1259 aa12.4□□□□□ -0.42
CLSTN3-206ENST00000535668 PDIA5Q14554 519 aa12.4□□□□□ -0.42
CLSTN3-206ENST00000535668 ALKAL1Q6UXT8 129 aa12.4□□□□□ -0.42
CLSTN3-206ENST00000535668 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.4□□□□□ -0.42
CLSTN3-206ENST00000535668 FRMD5Q7Z6J6 570 aa12.4□□□□□ -0.42
CLSTN3-206ENST00000535668 KCTD17Q8N5Z5 321 aa12.4□□□□□ -0.42
CLSTN3-206ENST00000535668 PIGOQ8TEQ8 1089 aa12.4□□□□□ -0.42
CLSTN3-206ENST00000535668 RIN2Q8WYP3 895 aaPredicted RBP12.4□□□□□ -0.42
CLSTN3-206ENST00000535668 NELL1Q92832 810 aa12.4□□□□□ -0.42
CLSTN3-206ENST00000535668 POLR3FQ9H1D9 316 aaPredicted RBP12.4□□□□□ -0.42
CLSTN3-206ENST00000535668 PDZD7Q9H5P4 517 aa12.4□□□□□ -0.42
CLSTN3-206ENST00000535668 CDH7Q9ULB5 785 aa12.4□□□□□ -0.42
CLSTN3-206ENST00000535668 NOTCH4Q99466 2003 aa12.4□□□□□ -0.42
CLSTN3-206ENST00000535668 PHLPP2Q6ZVD8 1323 aa12.39□□□□□ -0.43
CLSTN3-206ENST00000535668 C2CD2LO14523 706 aa12.39□□□□□ -0.43
CLSTN3-206ENST00000535668 NARSO43776 548 aaKnown RBP12.39□□□□□ -0.43
CLSTN3-206ENST00000535668 TADA2AO75478 443 aa12.39□□□□□ -0.43
CLSTN3-206ENST00000535668 AKAP5P24588 427 aa12.39□□□□□ -0.43
CLSTN3-206ENST00000535668 TXKP42681 527 aa12.39□□□□□ -0.43
CLSTN3-206ENST00000535668 PRKCQQ04759 706 aa12.39□□□□□ -0.43
CLSTN3-206ENST00000535668 PPP2R5AQ15172 486 aa12.39□□□□□ -0.43
CLSTN3-206ENST00000535668 MAPK6Q16659 721 aa12.39□□□□□ -0.43
CLSTN3-206ENST00000535668 SLC8B1Q6J4K2 584 aa12.39□□□□□ -0.43
CLSTN3-206ENST00000535668 CD300LGQ6UXG3 332 aa12.39□□□□□ -0.43
CLSTN3-206ENST00000535668 MTSS1LQ765P7 747 aa12.39□□□□□ -0.43
CLSTN3-206ENST00000535668 FLCNQ8NFG4 579 aa12.39□□□□□ -0.43
CLSTN3-206ENST00000535668 SHDQ96IW2 340 aa12.39□□□□□ -0.43
CLSTN3-206ENST00000535668 UROC1Q96N76 676 aa12.39□□□□□ -0.43
CLSTN3-206ENST00000535668 PPP1R10Q96QC0 940 aaKnown RBP12.39□□□□□ -0.43
CLSTN3-206ENST00000535668 LLPHQ9BRT6 129 aaKnown RBP12.39□□□□□ -0.43
CLSTN3-206ENST00000535668 NTPCRQ9BSD7 190 aaKnown RBP12.39□□□□□ -0.43
CLSTN3-206ENST00000535668 TMEM60Q9H2L4 133 aa12.39□□□□□ -0.43
CLSTN3-206ENST00000535668 FOXP1Q9H334 677 aaPredicted RBP12.39□□□□□ -0.43
CLSTN3-206ENST00000535668 PTPRHQ9HD43 1115 aa12.39□□□□□ -0.43
CLSTN3-206ENST00000535668 ARHGEF3Q9NR81 526 aa12.39□□□□□ -0.43
CLSTN3-206ENST00000535668 MTRRQ9UBK8 725 aa12.39□□□□□ -0.43
CLSTN3-206ENST00000535668 FBXL21Q9UKT6 434 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms