RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 CDK5RAP3Q96JB5 506 aa14.6□□□□□ -0.07
CLSTN3-205ENST00000535452 RTP3Q9BQQ7 232 aa14.6□□□□□ -0.07
CLSTN3-205ENST00000535452 TTPALQ9BTX7 342 aa14.6□□□□□ -0.07
CLSTN3-205ENST00000535452 CCDC94Q9BW85 323 aaPredicted RBP14.6□□□□□ -0.07
CLSTN3-205ENST00000535452 RHOBTB2Q9BYZ6 727 aa14.6□□□□□ -0.07
CLSTN3-205ENST00000535452 RNF39Q9H2S5 420 aa14.6□□□□□ -0.07
CLSTN3-205ENST00000535452 RXFP1Q9HBX9 757 aa14.6□□□□□ -0.07
CLSTN3-205ENST00000535452 WDR6Q9NNW5 1121 aaKnown RBP14.6□□□□□ -0.07
CLSTN3-205ENST00000535452 GPRC5CQ9NQ84 441 aa14.6□□□□□ -0.07
CLSTN3-205ENST00000535452 MARCH5Q9NX47 278 aa14.6□□□□□ -0.07
CLSTN3-205ENST00000535452 FNIP2Q9P278 1114 aa14.6□□□□□ -0.07
CLSTN3-205ENST00000535452 CDH22Q9UJ99 828 aa14.6□□□□□ -0.07
CLSTN3-205ENST00000535452 DNM3Q9UQ16 869 aa14.6□□□□□ -0.07
CLSTN3-205ENST00000535452 CLUHO75153 1309 aa14.6□□□□□ -0.07
CLSTN3-205ENST00000535452 AFF1P51825 1210 aaKnown RBP14.59□□□□□ -0.07
CLSTN3-205ENST00000535452 VCPP55072 806 aaKnown RBP14.59□□□□□ -0.07
CLSTN3-205ENST00000535452 PPM1LQ5SGD2 360 aa14.59□□□□□ -0.07
CLSTN3-205ENST00000535452 FAM171A1Q5VUB5 890 aa14.59□□□□□ -0.07
CLSTN3-205ENST00000535452 KIAA0319Q5VV43 1072 aa14.59□□□□□ -0.07
CLSTN3-205ENST00000535452 GET4Q7L5D6 327 aaPredicted RBP14.59□□□□□ -0.07
CLSTN3-205ENST00000535452 SNX29Q8TEQ0 813 aa14.59□□□□□ -0.07
CLSTN3-205ENST00000535452 DRC1Q96MC2 740 aa14.59□□□□□ -0.07
CLSTN3-205ENST00000535452 TCHPQ9BT92 498 aa14.59□□□□□ -0.07
CLSTN3-205ENST00000535452 KCNK12Q9HB15 430 aa14.59□□□□□ -0.07
CLSTN3-205ENST00000535452 SLC38A7Q9NVC3 462 aa14.59□□□□□ -0.07
CLSTN3-205ENST00000535452 SNTG2Q9NY99 539 aa14.59□□□□□ -0.07
CLSTN3-205ENST00000535452 POLIQ9UNA4 740 aa14.59□□□□□ -0.07
CLSTN3-205ENST00000535452 DUSP12Q9UNI6 340 aa14.59□□□□□ -0.07
CLSTN3-205ENST00000535452 GDAQ9Y2T3 454 aa14.59□□□□□ -0.07
CLSTN3-205ENST00000535452 ZFP37Q9Y6Q3 630 aaPredicted RBP14.59□□□□□ -0.07
CLSTN3-205ENST00000535452 CASTOR2A6NHX0 329 aa14.58□□□□□ -0.08
CLSTN3-205ENST00000535452 H0Y858 1186 aa14.58□□□□□ -0.08
CLSTN3-205ENST00000535452 H3BQV1 296 aa14.58□□□□□ -0.08
CLSTN3-205ENST00000535452 GFRA3O60609 400 aa14.58□□□□□ -0.08
CLSTN3-205ENST00000535452 LILRB3O75022 631 aa14.58□□□□□ -0.08
CLSTN3-205ENST00000535452 MED24O75448 989 aa14.58□□□□□ -0.08
CLSTN3-205ENST00000535452 STRN3Q13033 797 aa14.58□□□□□ -0.08
CLSTN3-205ENST00000535452 PSMD5Q16401 504 aa14.58□□□□□ -0.08
CLSTN3-205ENST00000535452 AMHR2Q16671 573 aa14.58□□□□□ -0.08
CLSTN3-205ENST00000535452 ATF7IP2Q5U623 682 aa14.58□□□□□ -0.08
CLSTN3-205ENST00000535452 CDCA2Q69YH5 1023 aaPredicted RBP14.58□□□□□ -0.08
CLSTN3-205ENST00000535452 MCTP1Q6DN14 999 aa14.58□□□□□ -0.08
CLSTN3-205ENST00000535452 KANK3Q6NY19 840 aa14.58□□□□□ -0.08
CLSTN3-205ENST00000535452 DTHD1Q6ZMT9 781 aa14.58□□□□□ -0.08
CLSTN3-205ENST00000535452 FBXO18Q8NFZ0 1043 aa14.58□□□□□ -0.08
CLSTN3-205ENST00000535452 UROC1Q96N76 676 aa14.58□□□□□ -0.08
CLSTN3-205ENST00000535452 VN1R3Q9BXE9 311 aa14.58□□□□□ -0.08
CLSTN3-205ENST00000535452 TMEM60Q9H2L4 133 aa14.58□□□□□ -0.08
CLSTN3-205ENST00000535452 BHMT2Q9H2M3 363 aa14.58□□□□□ -0.08
CLSTN3-205ENST00000535452 FZD8Q9H461 694 aa14.58□□□□□ -0.08
CLSTN3-205ENST00000535452 CHST7Q9NS84 486 aa14.58□□□□□ -0.08
CLSTN3-205ENST00000535452 KIAA1024Q9UPX6 916 aa14.58□□□□□ -0.08
CLSTN3-205ENST00000535452 A0A087WWV3 80 aa14.57□□□□□ -0.08
CLSTN3-205ENST00000535452 TGM5O43548 720 aa14.57□□□□□ -0.08
CLSTN3-205ENST00000535452 B4GALT3O60512 393 aa14.57□□□□□ -0.08
CLSTN3-205ENST00000535452 RECQL4O94761 1208 aa14.57□□□□□ -0.08
CLSTN3-205ENST00000535452 SPATA31D3P0C874 917 aa14.57□□□□□ -0.08
CLSTN3-205ENST00000535452 SPATA31C1P0DKV0 1188 aa14.57□□□□□ -0.08
CLSTN3-205ENST00000535452 MYBP10242 640 aa14.57□□□□□ -0.08
CLSTN3-205ENST00000535452 ELF1P32519 619 aa14.57□□□□□ -0.08
CLSTN3-205ENST00000535452 FXR2P51116 673 aaKnown RBP eCLIP14.57□□□□□ -0.08
CLSTN3-205ENST00000535452 SMTNP53814 917 aa14.57□□□□□ -0.08
CLSTN3-205ENST00000535452 PDIA5Q14554 519 aa14.57□□□□□ -0.08
CLSTN3-205ENST00000535452 ZRSR1Q15695 479 aaKnown RBP14.57□□□□□ -0.08
CLSTN3-205ENST00000535452 SPATA31D4Q6ZUB0 917 aa14.57□□□□□ -0.08
CLSTN3-205ENST00000535452 HASPINQ8TF76 798 aa14.57□□□□□ -0.08
CLSTN3-205ENST00000535452 SHDQ96IW2 340 aa14.57□□□□□ -0.08
CLSTN3-205ENST00000535452 MRPL4Q9BYD3 311 aaKnown RBP14.57□□□□□ -0.08
CLSTN3-205ENST00000535452 PRKD2Q9BZL6 878 aa14.57□□□□□ -0.08
CLSTN3-205ENST00000535452 PDZD7Q9H5P4 517 aa14.57□□□□□ -0.08
CLSTN3-205ENST00000535452 DDX19AQ9NUU7 478 aaKnown RBP14.57□□□□□ -0.08
CLSTN3-205ENST00000535452 RBM19Q9Y4C8 960 aaKnown RBP14.57□□□□□ -0.08
CLSTN3-205ENST00000535452 ARID2Q68CP9 1835 aa14.57□□□□□ -0.08
CLSTN3-205ENST00000535452 TECTAO75443 2155 aa14.56□□□□□ -0.08
CLSTN3-205ENST00000535452 H0YCG3 227 aa14.56□□□□□ -0.08
CLSTN3-205ENST00000535452 ZMYND10O75800 440 aa14.56□□□□□ -0.08
CLSTN3-205ENST00000535452 B3GAT3O94766 335 aa14.56□□□□□ -0.08
CLSTN3-205ENST00000535452 HNRNPA1P09651 372 aaKnown RBP eCLIP14.56□□□□□ -0.08
CLSTN3-205ENST00000535452 FSHRP23945 695 aa14.56□□□□□ -0.08
CLSTN3-205ENST00000535452 MATR3P43243 847 aaKnown RBP eCLIP14.56□□□□□ -0.08
CLSTN3-205ENST00000535452 TCF15Q12870 199 aa14.56□□□□□ -0.08
CLSTN3-205ENST00000535452 ZNF568Q3ZCX4 644 aa14.56□□□□□ -0.08
CLSTN3-205ENST00000535452 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.56□□□□□ -0.08
CLSTN3-205ENST00000535452 MTSS1LQ765P7 747 aa14.56□□□□□ -0.08
CLSTN3-205ENST00000535452 TAS1R1Q7RTX1 841 aa14.56□□□□□ -0.08
CLSTN3-205ENST00000535452 SIX5Q8N196 739 aa14.56□□□□□ -0.08
CLSTN3-205ENST00000535452 RASSF8Q8NHQ8 419 aa14.56□□□□□ -0.08
CLSTN3-205ENST00000535452 DDX27Q96GQ7 796 aaKnown RBP14.56□□□□□ -0.08
CLSTN3-205ENST00000535452 TIPINQ9BVW5 301 aa14.56□□□□□ -0.08
CLSTN3-205ENST00000535452 GPR62Q9BZJ7 368 aa14.56□□□□□ -0.08
CLSTN3-205ENST00000535452 NT5C3AQ9H0P0 336 aa14.56□□□□□ -0.08
CLSTN3-205ENST00000535452 C17orf75Q9HAS0 396 aa14.56□□□□□ -0.08
CLSTN3-205ENST00000535452 KMT5AQ9NQR1 393 aa14.56□□□□□ -0.08
CLSTN3-205ENST00000535452 MIOSQ9NXC5 875 aa14.56□□□□□ -0.08
CLSTN3-205ENST00000535452 WNT16Q9UBV4 365 aa14.56□□□□□ -0.08
CLSTN3-205ENST00000535452 NUB1Q9Y5A7 615 aa14.56□□□□□ -0.08
CLSTN3-205ENST00000535452 RFPL2O75678 378 aa14.55□□□□□ -0.08
CLSTN3-205ENST00000535452 PDGFBP01127 241 aaPredicted RBP14.55□□□□□ -0.08
CLSTN3-205ENST00000535452 C8AP07357 584 aa14.55□□□□□ -0.08
CLSTN3-205ENST00000535452 CFHP08603 1231 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms