RNA–Protein interactions for RNA: ENST00000535410.1

KNTC1-208, Transcript of kinetochore associated 1, humanhuman

TSL 1 (best)

Gene KNTC1, Length 331 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-208ENST00000535410 SLC22A17Q8WUG5 538 aa13.05□□□□□ -0.32
KNTC1-208ENST00000535410 HDAC7Q8WUI4 952 aa13.05□□□□□ -0.32
KNTC1-208ENST00000535410 BCL7CQ8WUZ0 217 aaPredicted RBP13.05□□□□□ -0.32
KNTC1-208ENST00000535410 AUTS2Q8WXX7 1259 aa13.05□□□□□ -0.32
KNTC1-208ENST00000535410 FBXL18Q96ME1 805 aa13.05□□□□□ -0.32
KNTC1-208ENST00000535410 UROC1Q96N76 676 aa13.05□□□□□ -0.32
KNTC1-208ENST00000535410 LRFN3Q9BTN0 628 aa13.05□□□□□ -0.32
KNTC1-208ENST00000535410 MMTAG2Q9BU76 263 aaKnown RBP13.05□□□□□ -0.32
KNTC1-208ENST00000535410 SFXN1Q9H9B4 322 aa13.05□□□□□ -0.32
KNTC1-208ENST00000535410 MIOSQ9NXC5 875 aa13.05□□□□□ -0.32
KNTC1-208ENST00000535410 ADAM28Q9UKQ2 775 aa13.05□□□□□ -0.32
KNTC1-208ENST00000535410 ARIH1Q9Y4X5 557 aaPredicted RBP13.05□□□□□ -0.32
KNTC1-208ENST00000535410 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.05□□□□□ -0.32
KNTC1-208ENST00000535410 PLXNA4Q9HCM2 1894 aa13.05□□□□□ -0.32
KNTC1-208ENST00000535410 SF3B1O75533 1304 aaKnown RBP eCLIP13.05□□□□□ -0.32
KNTC1-208ENST00000535410 ARID2Q68CP9 1835 aa13.04□□□□□ -0.32
KNTC1-208ENST00000535410 TRAPPC3O43617 180 aa13.04□□□□□ -0.32
KNTC1-208ENST00000535410 LILRB3O75022 631 aa13.04□□□□□ -0.32
KNTC1-208ENST00000535410 RECQL4O94761 1208 aa13.04□□□□□ -0.32
KNTC1-208ENST00000535410 CNPP09543 421 aaKnown RBP13.04□□□□□ -0.32
KNTC1-208ENST00000535410 PLA2G4BP0C869 781 aa13.04□□□□□ -0.32
KNTC1-208ENST00000535410 RBM10P98175 930 aaKnown RBP13.04□□□□□ -0.32
KNTC1-208ENST00000535410 DSG1Q02413 1049 aa13.04□□□□□ -0.32
KNTC1-208ENST00000535410 HSP90AA2PQ14568 343 aaPredicted RBP13.04□□□□□ -0.32
KNTC1-208ENST00000535410 FUT10Q6P4F1 479 aa13.04□□□□□ -0.32
KNTC1-208ENST00000535410 PLCD3Q8N3E9 789 aa13.04□□□□□ -0.32
KNTC1-208ENST00000535410 DDX27Q96GQ7 796 aaKnown RBP13.04□□□□□ -0.32
KNTC1-208ENST00000535410 ACO2Q99798 780 aaKnown RBP13.04□□□□□ -0.32
KNTC1-208ENST00000535410 KIFC3Q9BVG8 833 aa13.04□□□□□ -0.32
KNTC1-208ENST00000535410 RUSC1Q9BVN2 902 aa13.04□□□□□ -0.32
KNTC1-208ENST00000535410 ZSCAN16Q9H4T2 348 aaPredicted RBP13.04□□□□□ -0.32
KNTC1-208ENST00000535410 RXFP1Q9HBX9 757 aa13.04□□□□□ -0.32
KNTC1-208ENST00000535410 SLC38A7Q9NVC3 462 aa13.04□□□□□ -0.32
KNTC1-208ENST00000535410 SNTG2Q9NY99 539 aa13.04□□□□□ -0.32
KNTC1-208ENST00000535410 ARHGAP28Q9P2N2 729 aa13.04□□□□□ -0.32
KNTC1-208ENST00000535410 ODF2LQ9ULJ1 636 aa13.04□□□□□ -0.32
KNTC1-208ENST00000535410 GDAQ9Y2T3 454 aa13.04□□□□□ -0.32
KNTC1-208ENST00000535410 C2CD2LO14523 706 aa13.03□□□□□ -0.32
KNTC1-208ENST00000535410 SLC16A4O15374 487 aa13.03□□□□□ -0.32
KNTC1-208ENST00000535410 B4GALT3O60512 393 aa13.03□□□□□ -0.32
KNTC1-208ENST00000535410 GLUD1P00367 558 aa13.03□□□□□ -0.32
KNTC1-208ENST00000535410 KRT18P05783 430 aaKnown RBP13.03□□□□□ -0.32
KNTC1-208ENST00000535410 MCF2P10911 925 aa13.03□□□□□ -0.32
KNTC1-208ENST00000535410 TXLNAP40222 546 aa13.03□□□□□ -0.32
KNTC1-208ENST00000535410 GRM5P41594 1212 aa13.03□□□□□ -0.32
KNTC1-208ENST00000535410 CLCN4P51793 760 aa13.03□□□□□ -0.32
KNTC1-208ENST00000535410 SF3A1Q15459 793 aaKnown RBP13.03□□□□□ -0.32
KNTC1-208ENST00000535410 KYAT1Q16773 422 aa13.03□□□□□ -0.32
KNTC1-208ENST00000535410 ZNF568Q3ZCX4 644 aa13.03□□□□□ -0.32
KNTC1-208ENST00000535410 TMEM119Q4V9L6 283 aa13.03□□□□□ -0.32
KNTC1-208ENST00000535410 RARS2Q5T160 578 aaKnown RBP13.03□□□□□ -0.32
KNTC1-208ENST00000535410 NT5DC1Q5TFE4 455 aa13.03□□□□□ -0.32
KNTC1-208ENST00000535410 KIAA0319Q5VV43 1072 aa13.03□□□□□ -0.32
KNTC1-208ENST00000535410 C15orf39Q6ZRI6 1047 aa13.03□□□□□ -0.32
KNTC1-208ENST00000535410 EDAQ92838 391 aa13.03□□□□□ -0.32
KNTC1-208ENST00000535410 KHSRPQ92945 711 aaKnown RBP eCLIP13.03□□□□□ -0.32
KNTC1-208ENST00000535410 MFSD14AQ96MC6 490 aa13.03□□□□□ -0.32
KNTC1-208ENST00000535410 ACAP3Q96P50 834 aa13.03□□□□□ -0.32
KNTC1-208ENST00000535410 PNMA5Q96PV4 448 aa13.03□□□□□ -0.32
KNTC1-208ENST00000535410 APOL5Q9BWW9 433 aa13.03□□□□□ -0.32
KNTC1-208ENST00000535410 VN1R3Q9BXE9 311 aa13.03□□□□□ -0.32
KNTC1-208ENST00000535410 PLEKHA4Q9H4M7 779 aa13.03□□□□□ -0.32
KNTC1-208ENST00000535410 POLD4Q9HCU8 107 aa13.03□□□□□ -0.32
KNTC1-208ENST00000535410 CHST7Q9NS84 486 aa13.03□□□□□ -0.32
KNTC1-208ENST00000535410 MARCH5Q9NX47 278 aa13.03□□□□□ -0.32
KNTC1-208ENST00000535410 FNIP2Q9P278 1114 aa13.03□□□□□ -0.32
KNTC1-208ENST00000535410 CCDC39Q9UFE4 941 aa13.03□□□□□ -0.32
KNTC1-208ENST00000535410 MUC3AQ02505 3323 aa13.03□□□□□ -0.32
KNTC1-208ENST00000535410 K7ELQ4 463 aaPredicted RBP13.02□□□□□ -0.33
KNTC1-208ENST00000535410 TEX28O15482 410 aa13.02□□□□□ -0.33
KNTC1-208ENST00000535410 TOM1L1O75674 476 aa13.02□□□□□ -0.33
KNTC1-208ENST00000535410 EFEMP2O95967 443 aa13.02□□□□□ -0.33
KNTC1-208ENST00000535410 EPCAMP16422 314 aa13.02□□□□□ -0.33
KNTC1-208ENST00000535410 SYT1P21579 422 aa13.02□□□□□ -0.33
KNTC1-208ENST00000535410 SLC12A3P55017 1021 aa13.02□□□□□ -0.33
KNTC1-208ENST00000535410 MAPK7Q13164 816 aa13.02□□□□□ -0.33
KNTC1-208ENST00000535410 EEF1DP3Q658K8 133 aa13.02□□□□□ -0.33
KNTC1-208ENST00000535410 DCLRE1AQ6PJP8 1040 aa13.02□□□□□ -0.33
KNTC1-208ENST00000535410 MPZL3Q6UWV2 235 aa13.02□□□□□ -0.33
KNTC1-208ENST00000535410 ZPBP2Q6X784 338 aa13.02□□□□□ -0.33
KNTC1-208ENST00000535410 KCNK18Q7Z418 384 aa13.02□□□□□ -0.33
KNTC1-208ENST00000535410 ZBTB33Q86T24 672 aa13.02□□□□□ -0.33
KNTC1-208ENST00000535410 RNF168Q8IYW5 571 aaPredicted RBP13.02□□□□□ -0.33
KNTC1-208ENST00000535410 DAW1Q8N136 415 aa13.02□□□□□ -0.33
KNTC1-208ENST00000535410 CMASQ8NFW8 434 aaPredicted RBP13.02□□□□□ -0.33
KNTC1-208ENST00000535410 ACSF2Q96CM8 615 aaPredicted RBP13.02□□□□□ -0.33
KNTC1-208ENST00000535410 PLIN2Q99541 437 aa13.02□□□□□ -0.33
KNTC1-208ENST00000535410 TTPALQ9BTX7 342 aa13.02□□□□□ -0.33
KNTC1-208ENST00000535410 RHOBTB2Q9BYZ6 727 aa13.02□□□□□ -0.33
KNTC1-208ENST00000535410 CCSER1Q9C0I3 900 aa13.02□□□□□ -0.33
KNTC1-208ENST00000535410 TSHZ2Q9NRE2 1034 aa13.02□□□□□ -0.33
KNTC1-208ENST00000535410 MUTYHQ9UIF7 546 aa13.02□□□□□ -0.33
KNTC1-208ENST00000535410 USTQ9Y2C2 406 aa13.02□□□□□ -0.33
KNTC1-208ENST00000535410 TTLL13PA6NNM8 815 aa13.01□□□□□ -0.33
KNTC1-208ENST00000535410 SFI1A8K8P3 1242 aa13.01□□□□□ -0.33
KNTC1-208ENST00000535410 PTGESO14684 152 aa13.01□□□□□ -0.33
KNTC1-208ENST00000535410 CLDN3O15551 220 aa13.01□□□□□ -0.33
KNTC1-208ENST00000535410 FAM13AO94988 1023 aa13.01□□□□□ -0.33
KNTC1-208ENST00000535410 BRD1O95696 1058 aa13.01□□□□□ -0.33
KNTC1-208ENST00000535410 DDIT3P35638 169 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms