RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 LIG4P49917 911 aa24.88■■□□□ 1.57
SFSWAP-204ENST00000535399 PLCB3Q01970 1234 aa24.88■■□□□ 1.57
SFSWAP-204ENST00000535399 CUL4BQ13620 913 aa24.88■■□□□ 1.57
SFSWAP-204ENST00000535399 CAMK1Q14012 370 aa24.88■■□□□ 1.57
SFSWAP-204ENST00000535399 NOLC1Q14978 699 aaKnown RBP eCLIP24.88■■□□□ 1.57
SFSWAP-204ENST00000535399 SLC39A4Q6P5W5 647 aa24.88■■□□□ 1.57
SFSWAP-204ENST00000535399 UNC13DQ70J99 1090 aa24.88■■□□□ 1.57
SFSWAP-204ENST00000535399 CXCL16Q9H2A7 254 aa24.88■■□□□ 1.57
SFSWAP-204ENST00000535399 SPG21Q9NZD8 308 aa24.88■■□□□ 1.57
SFSWAP-204ENST00000535399 NLRC5Q86WI3 1866 aa24.87■■□□□ 1.57
SFSWAP-204ENST00000535399 KIAA1671Q9BY89 1806 aa24.87■■□□□ 1.57
SFSWAP-204ENST00000535399 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP24.87■■□□□ 1.57
SFSWAP-204ENST00000535399 PTGESO14684 152 aa24.87■■□□□ 1.57
SFSWAP-204ENST00000535399 HNRNPDLO14979 420 aaKnown RBP24.87■■□□□ 1.57
SFSWAP-204ENST00000535399 CLDN3O15551 220 aa24.87■■□□□ 1.57
SFSWAP-204ENST00000535399 GCNT3O95395 438 aa24.87■■□□□ 1.57
SFSWAP-204ENST00000535399 HARSP12081 509 aaKnown RBP24.87■■□□□ 1.57
SFSWAP-204ENST00000535399 PPM1AP35813 382 aa24.87■■□□□ 1.57
SFSWAP-204ENST00000535399 SLC11A1P49279 550 aa24.87■■□□□ 1.57
SFSWAP-204ENST00000535399 ALDH7A1P49419 539 aaKnown RBP24.87■■□□□ 1.57
SFSWAP-204ENST00000535399 EHHADHQ08426 723 aa24.87■■□□□ 1.57
SFSWAP-204ENST00000535399 DSC1Q08554 894 aa24.87■■□□□ 1.57
SFSWAP-204ENST00000535399 KCNA1Q09470 495 aa24.87■■□□□ 1.57
SFSWAP-204ENST00000535399 L1TD1Q5T7N2 865 aaKnown RBP24.87■■□□□ 1.57
SFSWAP-204ENST00000535399 MICALL1Q8N3F8 863 aa24.87■■□□□ 1.57
SFSWAP-204ENST00000535399 POF1BQ8WVV4 589 aa24.87■■□□□ 1.57
SFSWAP-204ENST00000535399 HPS3Q969F9 1004 aa24.87■■□□□ 1.57
SFSWAP-204ENST00000535399 CCDC94Q9BW85 323 aaPredicted RBP24.87■■□□□ 1.57
SFSWAP-204ENST00000535399 IKZF4Q9H2S9 585 aa24.87■■□□□ 1.57
SFSWAP-204ENST00000535399 NT5C1B-RDH14C9J2C7 533 aa24.86■■□□□ 1.57
SFSWAP-204ENST00000535399 ANKRD63C9JTQ0 380 aa24.86■■□□□ 1.57
SFSWAP-204ENST00000535399 OSTNP61366 133 aa24.86■■□□□ 1.57
SFSWAP-204ENST00000535399 UBE3AQ05086 875 aa24.86■■□□□ 1.57
SFSWAP-204ENST00000535399 ALCAMQ13740 583 aa24.86■■□□□ 1.57
SFSWAP-204ENST00000535399 TMEM173Q86WV6 379 aaPredicted RBP24.86■■□□□ 1.57
SFSWAP-204ENST00000535399 COLGALT2Q8IYK4 626 aa24.86■■□□□ 1.57
SFSWAP-204ENST00000535399 FAM193BQ96PV7 902 aaPredicted RBP24.86■■□□□ 1.57
SFSWAP-204ENST00000535399 RPS6KC1Q96S38 1066 aa24.86■■□□□ 1.57
SFSWAP-204ENST00000535399 TMEM175Q9BSA9 504 aa24.86■■□□□ 1.57
SFSWAP-204ENST00000535399 PCDHB13Q9Y5F0 798 aa24.86■■□□□ 1.57
SFSWAP-204ENST00000535399 A0A0B4J269 797 aa24.85■■□□□ 1.57
SFSWAP-204ENST00000535399 PVALEFA0A1B0GWK0 134 aa24.85■■□□□ 1.57
SFSWAP-204ENST00000535399 CARNS1A5YM72 827 aa24.85■■□□□ 1.57
SFSWAP-204ENST00000535399 ZNF202O95125 648 aa24.85■■□□□ 1.57
SFSWAP-204ENST00000535399 GRIK3Q13003 919 aa24.85■■□□□ 1.57
SFSWAP-204ENST00000535399 CCDC85BQ15834 202 aaPredicted RBP24.85■■□□□ 1.57
SFSWAP-204ENST00000535399 GLIS3Q8NEA6 775 aa24.85■■□□□ 1.57
SFSWAP-204ENST00000535399 BCL7CQ8WUZ0 217 aaPredicted RBP24.85■■□□□ 1.57
SFSWAP-204ENST00000535399 ACCSQ96QU6 501 aa24.85■■□□□ 1.57
SFSWAP-204ENST00000535399 LZTS1Q9Y250 596 aa24.85■■□□□ 1.57
SFSWAP-204ENST00000535399 EYSQ5T1H1 3165 aa24.84■■□□□ 1.57
SFSWAP-204ENST00000535399 GOLGA6L4A6NEF3 574 aa24.84■■□□□ 1.57
SFSWAP-204ENST00000535399 TISP43B9A030 160 aa24.84■■□□□ 1.57
SFSWAP-204ENST00000535399 MEFVO15553 781 aaPredicted RBP24.84■■□□□ 1.57
SFSWAP-204ENST00000535399 KLRC4O43908 158 aa24.84■■□□□ 1.57
SFSWAP-204ENST00000535399 SEZ6Q53EL9 994 aa24.84■■□□□ 1.57
SFSWAP-204ENST00000535399 XKR4Q5GH76 650 aa24.84■■□□□ 1.57
SFSWAP-204ENST00000535399 FAM26FQ5R3K3 315 aa24.84■■□□□ 1.57
SFSWAP-204ENST00000535399 ALKAL1Q6UXT8 129 aa24.84■■□□□ 1.57
SFSWAP-204ENST00000535399 KRBA2Q6ZNG9 492 aa24.84■■□□□ 1.57
SFSWAP-204ENST00000535399 FMR1NBQ8N0W7 255 aaPredicted RBP24.84■■□□□ 1.57
SFSWAP-204ENST00000535399 PPM1EQ8WY54 764 aa24.84■■□□□ 1.57
SFSWAP-204ENST00000535399 IGSF21Q96ID5 467 aa24.84■■□□□ 1.57
SFSWAP-204ENST00000535399 ACAP3Q96P50 834 aa24.84■■□□□ 1.57
SFSWAP-204ENST00000535399 STYXL1Q9Y6J8 313 aa24.84■■□□□ 1.57
SFSWAP-204ENST00000535399 FAM189A1O60320 539 aa24.83■■□□□ 1.57
SFSWAP-204ENST00000535399 PRPF6O94906 941 aaKnown RBP24.83■■□□□ 1.57
SFSWAP-204ENST00000535399 ALDH2P05091 517 aa24.83■■□□□ 1.57
SFSWAP-204ENST00000535399 IRS1P35568 1242 aa24.83■■□□□ 1.57
SFSWAP-204ENST00000535399 MATR3P43243 847 aaKnown RBP eCLIP24.83■■□□□ 1.57
SFSWAP-204ENST00000535399 NAB2Q15742 525 aa24.83■■□□□ 1.57
SFSWAP-204ENST00000535399 TIGD5Q53EQ6 642 aa24.83■■□□□ 1.57
SFSWAP-204ENST00000535399 SNX27Q96L92 541 aa24.83■■□□□ 1.57
SFSWAP-204ENST00000535399 TOPORSQ9NS56 1045 aaPredicted RBP24.83■■□□□ 1.57
SFSWAP-204ENST00000535399 EXOC7Q9UPT5 735 aa24.83■■□□□ 1.57
SFSWAP-204ENST00000535399 FAN1Q9Y2M0 1017 aa24.83■■□□□ 1.57
SFSWAP-204ENST00000535399 NRP1O14786 923 aa24.82■■□□□ 1.56
SFSWAP-204ENST00000535399 CSPG5O95196 566 aa24.82■■□□□ 1.56
SFSWAP-204ENST00000535399 MYL1P05976 194 aa24.82■■□□□ 1.56
SFSWAP-204ENST00000535399 THP07101 528 aa24.82■■□□□ 1.56
SFSWAP-204ENST00000535399 PRR29P0C7W0 189 aa24.82■■□□□ 1.56
SFSWAP-204ENST00000535399 YARSP54577 528 aaKnown RBP24.82■■□□□ 1.56
SFSWAP-204ENST00000535399 KRT17Q04695 432 aa24.82■■□□□ 1.56
SFSWAP-204ENST00000535399 ZBTB41Q5SVQ8 909 aa24.82■■□□□ 1.56
SFSWAP-204ENST00000535399 EPM2AIP1Q7L775 607 aaPredicted RBP24.82■■□□□ 1.56
SFSWAP-204ENST00000535399 ENGASEQ8NFI3 743 aa24.82■■□□□ 1.56
SFSWAP-204ENST00000535399 MARCH5Q9NX47 278 aa24.82■■□□□ 1.56
SFSWAP-204ENST00000535399 PUF60Q9UHX1 559 aaKnown RBP24.82■■□□□ 1.56
SFSWAP-204ENST00000535399 MYO7AQ13402 2215 aa24.82■■□□□ 1.56
SFSWAP-204ENST00000535399 FSCN2O14926 492 aa24.81■■□□□ 1.56
SFSWAP-204ENST00000535399 OGTO15294 1046 aa24.81■■□□□ 1.56
SFSWAP-204ENST00000535399 CLTAP09496 248 aa24.81■■□□□ 1.56
SFSWAP-204ENST00000535399 ADSSP30520 456 aa24.81■■□□□ 1.56
SFSWAP-204ENST00000535399 OR1G1P47890 313 aa24.81■■□□□ 1.56
SFSWAP-204ENST00000535399 ERVFC1P60507 584 aa24.81■■□□□ 1.56
SFSWAP-204ENST00000535399 SNW1Q13573 536 aaKnown RBP24.81■■□□□ 1.56
SFSWAP-204ENST00000535399 SLC10A6Q3KNW5 377 aa24.81■■□□□ 1.56
SFSWAP-204ENST00000535399 TCEAL5Q5H9L2 206 aa24.81■■□□□ 1.56
SFSWAP-204ENST00000535399 GLRA4Q5JXX5 417 aa24.81■■□□□ 1.56
SFSWAP-204ENST00000535399 SLFN12LQ6IEE8 588 aa24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms