RNA–Protein interactions for RNA: ENST00000534636.5

CTSB-233, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-233ENST00000534636 PLEKHA4Q9H4M7 779 aa20.38■□□□□ 0.85
CTSB-233ENST00000534636 CHST7Q9NS84 486 aa20.38■□□□□ 0.85
CTSB-233ENST00000534636 DAXXQ9UER7 740 aaPredicted RBP20.38■□□□□ 0.85
CTSB-233ENST00000534636 LRWD1Q9UFC0 647 aa20.38■□□□□ 0.85
CTSB-233ENST00000534636 ACKR2O00590 384 aa20.37■□□□□ 0.85
CTSB-233ENST00000534636 RECQL4O94761 1208 aa20.37■□□□□ 0.85
CTSB-233ENST00000534636 EFEMP2O95967 443 aa20.37■□□□□ 0.85
CTSB-233ENST00000534636 PDGFBP01127 241 aaPredicted RBP20.37■□□□□ 0.85
CTSB-233ENST00000534636 THP07101 528 aa20.37■□□□□ 0.85
CTSB-233ENST00000534636 EFNA5P52803 228 aa20.37■□□□□ 0.85
CTSB-233ENST00000534636 NUBP1P53384 320 aa20.37■□□□□ 0.85
CTSB-233ENST00000534636 DCAF4L1Q3SXM0 396 aa20.37■□□□□ 0.85
CTSB-233ENST00000534636 BSNDQ8WZ55 320 aa20.37■□□□□ 0.85
CTSB-233ENST00000534636 B3GALT6Q96L58 329 aa20.37■□□□□ 0.85
CTSB-233ENST00000534636 GPR62Q9BZJ7 368 aa20.37■□□□□ 0.85
CTSB-233ENST00000534636 BHMT2Q9H2M3 363 aa20.37■□□□□ 0.85
CTSB-233ENST00000534636 PIDD1Q9HB75 910 aa20.37■□□□□ 0.85
CTSB-233ENST00000534636 SNTG2Q9NY99 539 aa20.37■□□□□ 0.85
CTSB-233ENST00000534636 FNIP2Q9P278 1114 aa20.37■□□□□ 0.85
CTSB-233ENST00000534636 KIF3AQ9Y496 699 aa20.37■□□□□ 0.85
CTSB-233ENST00000534636 CLUHO75153 1309 aa20.36■□□□□ 0.85
CTSB-233ENST00000534636 CASTOR2A6NHX0 329 aa20.36■□□□□ 0.85
CTSB-233ENST00000534636 C1RP00736 705 aa20.36■□□□□ 0.85
CTSB-233ENST00000534636 TCF15Q12870 199 aa20.36■□□□□ 0.85
CTSB-233ENST00000534636 PALB2Q86YC2 1186 aa20.36■□□□□ 0.85
CTSB-233ENST00000534636 GLYCTKQ8IVS8 523 aa20.36■□□□□ 0.85
CTSB-233ENST00000534636 SNX29Q8TEQ0 813 aa20.36■□□□□ 0.85
CTSB-233ENST00000534636 SMG7Q92540 1137 aaKnown RBP20.36■□□□□ 0.85
CTSB-233ENST00000534636 RHOBTB2Q9BYZ6 727 aa20.36■□□□□ 0.85
CTSB-233ENST00000534636 SMOC2Q9H3U7 446 aa20.36■□□□□ 0.85
CTSB-233ENST00000534636 USP34Q70CQ2 3546 aa20.35■□□□□ 0.85
CTSB-233ENST00000534636 MYBP10242 640 aa20.35■□□□□ 0.85
CTSB-233ENST00000534636 GBP2P32456 591 aaPredicted RBP20.35■□□□□ 0.85
CTSB-233ENST00000534636 TDGQ13569 410 aa20.35■□□□□ 0.85
CTSB-233ENST00000534636 NBR1Q14596 966 aa20.35■□□□□ 0.85
CTSB-233ENST00000534636 FEZF2Q8TBJ5 459 aa20.35■□□□□ 0.85
CTSB-233ENST00000534636 HASPINQ8TF76 798 aa20.35■□□□□ 0.85
CTSB-233ENST00000534636 RABGGTAQ92696 567 aa20.35■□□□□ 0.85
CTSB-233ENST00000534636 CCDC113Q9H0I3 377 aa20.35■□□□□ 0.85
CTSB-233ENST00000534636 WDR6Q9NNW5 1121 aaKnown RBP20.35■□□□□ 0.85
CTSB-233ENST00000534636 DDX19AQ9NUU7 478 aaKnown RBP20.35■□□□□ 0.85
CTSB-233ENST00000534636 ZDHHC7Q9NXF8 308 aa20.35■□□□□ 0.85
CTSB-233ENST00000534636 IGSF9Q9P2J2 1179 aa20.35■□□□□ 0.85
CTSB-233ENST00000534636 KIAA1024Q9UPX6 916 aa20.35■□□□□ 0.85
CTSB-233ENST00000534636 TRIP11Q15643 1979 aa20.34■□□□□ 0.85
CTSB-233ENST00000534636 LAD1O00515 517 aa20.34■□□□□ 0.85
CTSB-233ENST00000534636 TGM5O43548 720 aa20.34■□□□□ 0.85
CTSB-233ENST00000534636 RFPL2O75678 378 aa20.34■□□□□ 0.85
CTSB-233ENST00000534636 CENPBP07199 599 aaPredicted RBP20.34■□□□□ 0.85
CTSB-233ENST00000534636 SPATA31D3P0C874 917 aa20.34■□□□□ 0.85
CTSB-233ENST00000534636 ELAVL2Q12926 359 aaKnown RBP20.34■□□□□ 0.85
CTSB-233ENST00000534636 PDIA5Q14554 519 aa20.34■□□□□ 0.85
CTSB-233ENST00000534636 ATF7IP2Q5U623 682 aa20.34■□□□□ 0.85
CTSB-233ENST00000534636 KRT79Q5XKE5 535 aa20.34■□□□□ 0.85
CTSB-233ENST00000534636 PDXDC1Q6P996 788 aa20.34■□□□□ 0.85
CTSB-233ENST00000534636 SPATA31D4Q6ZUB0 917 aa20.34■□□□□ 0.85
CTSB-233ENST00000534636 CEP57Q86XR8 500 aa20.34■□□□□ 0.85
CTSB-233ENST00000534636 ATOH1Q92858 354 aaPredicted RBP20.34■□□□□ 0.85
CTSB-233ENST00000534636 TTPALQ9BTX7 342 aa20.34■□□□□ 0.85
CTSB-233ENST00000534636 KIFC3Q9BVG8 833 aa20.34■□□□□ 0.85
CTSB-233ENST00000534636 KCNK12Q9HB15 430 aa20.34■□□□□ 0.85
CTSB-233ENST00000534636 CACNG4Q9UBN1 327 aa20.34■□□□□ 0.85
CTSB-233ENST00000534636 FBXL21Q9UKT6 434 aa20.34■□□□□ 0.85
CTSB-233ENST00000534636 GDAQ9Y2T3 454 aa20.34■□□□□ 0.85
CTSB-233ENST00000534636 DOCK8Q8NF50 2099 aa20.34■□□□□ 0.85
CTSB-233ENST00000534636 PHLPP2Q6ZVD8 1323 aa20.33■□□□□ 0.85
CTSB-233ENST00000534636 TTLL13PA6NNM8 815 aa20.33■□□□□ 0.85
CTSB-233ENST00000534636 KIF4AO95239 1232 aa20.33■□□□□ 0.85
CTSB-233ENST00000534636 RPL17P18621 184 aaKnown RBP20.33■□□□□ 0.85
CTSB-233ENST00000534636 U2AF2P26368 475 aaKnown RBP eCLIP20.33■□□□□ 0.85
CTSB-233ENST00000534636 PTGDRQ13258 359 aa20.33■□□□□ 0.85
CTSB-233ENST00000534636 DMP1Q13316 513 aaPredicted RBP20.33■□□□□ 0.85
CTSB-233ENST00000534636 PAAF1Q9BRP4 392 aa20.33■□□□□ 0.85
CTSB-233ENST00000534636 DUSP12Q9UNI6 340 aa20.33■□□□□ 0.85
CTSB-233ENST00000534636 DNM3Q9UQ16 869 aa20.33■□□□□ 0.85
CTSB-233ENST00000534636 MYH11P35749 1972 aa20.32■□□□□ 0.84
CTSB-233ENST00000534636 CCDC169A6NNP5 214 aa20.32■□□□□ 0.84
CTSB-233ENST00000534636 PTGESO14684 152 aa20.32■□□□□ 0.84
CTSB-233ENST00000534636 GALR2O43603 387 aaPredicted RBP20.32■□□□□ 0.84
CTSB-233ENST00000534636 ST18O60284 1047 aa20.32■□□□□ 0.84
CTSB-233ENST00000534636 PSMD5Q16401 504 aa20.32■□□□□ 0.84
CTSB-233ENST00000534636 ECM1Q16610 540 aa20.32■□□□□ 0.84
CTSB-233ENST00000534636 RTP2Q5QGT7 225 aa20.32■□□□□ 0.84
CTSB-233ENST00000534636 LIN9Q5TKA1 542 aa20.32■□□□□ 0.84
CTSB-233ENST00000534636 FAM171A1Q5VUB5 890 aa20.32■□□□□ 0.84
CTSB-233ENST00000534636 ASTLQ6HA08 431 aaPredicted RBP20.32■□□□□ 0.84
CTSB-233ENST00000534636 PRSS55Q6UWB4 352 aaPredicted RBP20.32■□□□□ 0.84
CTSB-233ENST00000534636 C4orf32Q8N8J7 132 aa20.32■□□□□ 0.84
CTSB-233ENST00000534636 IGSF22Q8N9C0 903 aa20.32■□□□□ 0.84
CTSB-233ENST00000534636 K7ERI5 159 aa20.31■□□□□ 0.84
CTSB-233ENST00000534636 EEF1DP3Q658K8 133 aa20.31■□□□□ 0.84
CTSB-233ENST00000534636 MCTP1Q6DN14 999 aa20.31■□□□□ 0.84
CTSB-233ENST00000534636 GET4Q7L5D6 327 aaPredicted RBP20.31■□□□□ 0.84
CTSB-233ENST00000534636 FLCNQ8NFG4 579 aa20.31■□□□□ 0.84
CTSB-233ENST00000534636 PIK3R5Q8WYR1 880 aa20.31■□□□□ 0.84
CTSB-233ENST00000534636 DRC1Q96MC2 740 aa20.31■□□□□ 0.84
CTSB-233ENST00000534636 PHOX2BQ99453 314 aa20.31■□□□□ 0.84
CTSB-233ENST00000534636 PRKD2Q9BZL6 878 aa20.31■□□□□ 0.84
CTSB-233ENST00000534636 NT5C3AQ9H0P0 336 aa20.31■□□□□ 0.84
CTSB-233ENST00000534636 USP20Q9Y2K6 914 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms