RNA–Protein interactions for RNA: ENST00000533953.5

CMTM1-219, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 934 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-219ENST00000533953 TOM1L1O75674 476 aa14.66□□□□□ -0.06
CMTM1-219ENST00000533953 PRPF6O94906 941 aaKnown RBP14.66□□□□□ -0.06
CMTM1-219ENST00000533953 GCNT3O95395 438 aa14.66□□□□□ -0.06
CMTM1-219ENST00000533953 SLFN14P0C7P3 912 aa14.66□□□□□ -0.06
CMTM1-219ENST00000533953 PRR29P0C7W0 189 aa14.66□□□□□ -0.06
CMTM1-219ENST00000533953 MCF2P10911 925 aa14.66□□□□□ -0.06
CMTM1-219ENST00000533953 GAP43P17677 238 aa14.66□□□□□ -0.06
CMTM1-219ENST00000533953 TNFSF9P41273 254 aa14.66□□□□□ -0.06
CMTM1-219ENST00000533953 GRM5P41594 1212 aa14.66□□□□□ -0.06
CMTM1-219ENST00000533953 SYKP43405 635 aa14.66□□□□□ -0.06
CMTM1-219ENST00000533953 LIG4P49917 911 aa14.66□□□□□ -0.06
CMTM1-219ENST00000533953 SPAG1Q07617 926 aa14.66□□□□□ -0.06
CMTM1-219ENST00000533953 PTPROQ16827 1216 aa14.66□□□□□ -0.06
CMTM1-219ENST00000533953 ZPBP2Q6X784 338 aa14.66□□□□□ -0.06
CMTM1-219ENST00000533953 TAS1R1Q7RTX1 841 aa14.66□□□□□ -0.06
CMTM1-219ENST00000533953 RBM23Q86U06 439 aaKnown RBP14.66□□□□□ -0.06
CMTM1-219ENST00000533953 CCDC65Q8IXS2 484 aa14.66□□□□□ -0.06
CMTM1-219ENST00000533953 AUTS2Q8WXX7 1259 aa14.66□□□□□ -0.06
CMTM1-219ENST00000533953 STRA6Q9BX79 667 aa14.66□□□□□ -0.06
CMTM1-219ENST00000533953 VN1R3Q9BXE9 311 aa14.66□□□□□ -0.06
CMTM1-219ENST00000533953 IGFLR1Q9H665 355 aa14.66□□□□□ -0.06
CMTM1-219ENST00000533953 LMCD1Q9NZU5 365 aa14.66□□□□□ -0.06
CMTM1-219ENST00000533953 KANSL3Q9P2N6 904 aa14.66□□□□□ -0.06
CMTM1-219ENST00000533953 FAN1Q9Y2M0 1017 aa14.66□□□□□ -0.06
CMTM1-219ENST00000533953 A0A1W2PQ27 194 aa14.65□□□□□ -0.06
CMTM1-219ENST00000533953 A0A1W2PQ64 194 aa14.65□□□□□ -0.06
CMTM1-219ENST00000533953 A0A1W2PQD8 194 aa14.65□□□□□ -0.06
CMTM1-219ENST00000533953 CASTOR2A6NHX0 329 aa14.65□□□□□ -0.06
CMTM1-219ENST00000533953 H0YCG3 227 aa14.65□□□□□ -0.06
CMTM1-219ENST00000533953 HNRNPDLO14979 420 aaKnown RBP14.65□□□□□ -0.06
CMTM1-219ENST00000533953 PER2O15055 1255 aa14.65□□□□□ -0.06
CMTM1-219ENST00000533953 CLDN3O15551 220 aa14.65□□□□□ -0.06
CMTM1-219ENST00000533953 PPP1R37O75864 691 aa14.65□□□□□ -0.06
CMTM1-219ENST00000533953 ALDH2P05091 517 aa14.65□□□□□ -0.06
CMTM1-219ENST00000533953 AMPD3Q01432 767 aa14.65□□□□□ -0.06
CMTM1-219ENST00000533953 TFF2Q03403 129 aa14.65□□□□□ -0.06
CMTM1-219ENST00000533953 MCL1Q07820 350 aa14.65□□□□□ -0.06
CMTM1-219ENST00000533953 DSC1Q08554 894 aa14.65□□□□□ -0.06
CMTM1-219ENST00000533953 PLPP4Q5VZY2 271 aa14.65□□□□□ -0.06
CMTM1-219ENST00000533953 MAP4K3Q8IVH8 894 aa14.65□□□□□ -0.06
CMTM1-219ENST00000533953 CEP57L1Q8IYX8 460 aa14.65□□□□□ -0.06
CMTM1-219ENST00000533953 ZSWIM2Q8NEG5 633 aa14.65□□□□□ -0.06
CMTM1-219ENST00000533953 MRPS27Q92552 414 aaKnown RBP14.65□□□□□ -0.06
CMTM1-219ENST00000533953 IGSF21Q96ID5 467 aa14.65□□□□□ -0.06
CMTM1-219ENST00000533953 ZMAT2Q96NC0 199 aaKnown RBP14.65□□□□□ -0.06
CMTM1-219ENST00000533953 RPS6KC1Q96S38 1066 aa14.65□□□□□ -0.06
CMTM1-219ENST00000533953 CCDC94Q9BW85 323 aaPredicted RBP14.65□□□□□ -0.06
CMTM1-219ENST00000533953 GOLGA2P5Q9HBQ8 144 aa14.65□□□□□ -0.06
CMTM1-219ENST00000533953 TSHZ2Q9NRE2 1034 aa14.65□□□□□ -0.06
CMTM1-219ENST00000533953 COL4A4P53420 1690 aaPredicted RBP14.65□□□□□ -0.06
CMTM1-219ENST00000533953 FAM237AA0A1B0GTK4 181 aa14.64□□□□□ -0.07
CMTM1-219ENST00000533953 HIDE1A8MVS5 230 aa14.64□□□□□ -0.07
CMTM1-219ENST00000533953 TULP1O00294 542 aaPredicted RBP14.64□□□□□ -0.07
CMTM1-219ENST00000533953 LINC01565O15544 149 aa14.64□□□□□ -0.07
CMTM1-219ENST00000533953 GADD45BO75293 160 aaPredicted RBP14.64□□□□□ -0.07
CMTM1-219ENST00000533953 PIGRP01833 764 aa14.64□□□□□ -0.07
CMTM1-219ENST00000533953 RBM10P98175 930 aaKnown RBP14.64□□□□□ -0.07
CMTM1-219ENST00000533953 PLCB3Q01970 1234 aa14.64□□□□□ -0.07
CMTM1-219ENST00000533953 HYAL1Q12794 435 aa14.64□□□□□ -0.07
CMTM1-219ENST00000533953 NOLC1Q14978 699 aaKnown RBP eCLIP14.64□□□□□ -0.07
CMTM1-219ENST00000533953 NAB2Q15742 525 aa14.64□□□□□ -0.07
CMTM1-219ENST00000533953 SLC10A6Q3KNW5 377 aa14.64□□□□□ -0.07
CMTM1-219ENST00000533953 EP400NLQ6ZTU2 488 aa14.64□□□□□ -0.07
CMTM1-219ENST00000533953 HASPINQ8TF76 798 aa14.64□□□□□ -0.07
CMTM1-219ENST00000533953 ACAP3Q96P50 834 aa14.64□□□□□ -0.07
CMTM1-219ENST00000533953 TCF25Q9BQ70 676 aa14.64□□□□□ -0.07
CMTM1-219ENST00000533953 LRRC27Q9C0I9 530 aa14.64□□□□□ -0.07
CMTM1-219ENST00000533953 LMAN2LQ9H0V9 348 aa14.64□□□□□ -0.07
CMTM1-219ENST00000533953 ST6GALNAC4Q9H4F1 302 aa14.64□□□□□ -0.07
CMTM1-219ENST00000533953 NSUN3Q9H649 340 aaKnown RBP14.64□□□□□ -0.07
CMTM1-219ENST00000533953 TLR9Q9NR96 1032 aa14.64□□□□□ -0.07
CMTM1-219ENST00000533953 MARCH5Q9NX47 278 aa14.64□□□□□ -0.07
CMTM1-219ENST00000533953 CHMP5Q9NZZ3 219 aa14.64□□□□□ -0.07
CMTM1-219ENST00000533953 SEL1LQ9UBV2 794 aa14.64□□□□□ -0.07
CMTM1-219ENST00000533953 CIZ1Q9ULV3 898 aaPredicted RBP14.64□□□□□ -0.07
CMTM1-219ENST00000533953 A0A0B4J269 797 aa14.63□□□□□ -0.07
CMTM1-219ENST00000533953 SMIM28A0A1B0GU29 152 aa14.63□□□□□ -0.07
CMTM1-219ENST00000533953 KLRC4O43908 158 aa14.63□□□□□ -0.07
CMTM1-219ENST00000533953 ZNF202O95125 648 aa14.63□□□□□ -0.07
CMTM1-219ENST00000533953 THP07101 528 aa14.63□□□□□ -0.07
CMTM1-219ENST00000533953 CXCL8P10145 99 aa14.63□□□□□ -0.07
CMTM1-219ENST00000533953 ADSSP30520 456 aa14.63□□□□□ -0.07
CMTM1-219ENST00000533953 CA8P35219 290 aa14.63□□□□□ -0.07
CMTM1-219ENST00000533953 HOXD13P35453 343 aa14.63□□□□□ -0.07
CMTM1-219ENST00000533953 ACOT2P49753 483 aa14.63□□□□□ -0.07
CMTM1-219ENST00000533953 KRT17Q04695 432 aa14.63□□□□□ -0.07
CMTM1-219ENST00000533953 SOX4Q06945 474 aaPredicted RBP14.63□□□□□ -0.07
CMTM1-219ENST00000533953 GRIK3Q13003 919 aa14.63□□□□□ -0.07
CMTM1-219ENST00000533953 CSPP1Q1MSJ5 1256 aa14.63□□□□□ -0.07
CMTM1-219ENST00000533953 L1TD1Q5T7N2 865 aaKnown RBP14.63□□□□□ -0.07
CMTM1-219ENST00000533953 ALKAL1Q6UXT8 129 aa14.63□□□□□ -0.07
CMTM1-219ENST00000533953 TMC7Q7Z402 723 aa14.63□□□□□ -0.07
CMTM1-219ENST00000533953 APBB1IPQ7Z5R6 666 aaPredicted RBP14.63□□□□□ -0.07
CMTM1-219ENST00000533953 VPS52Q8N1B4 723 aa14.63□□□□□ -0.07
CMTM1-219ENST00000533953 KCNN1Q92952 543 aa14.63□□□□□ -0.07
CMTM1-219ENST00000533953 C18orf25Q96B23 403 aaPredicted RBP14.63□□□□□ -0.07
CMTM1-219ENST00000533953 TMEM169Q96HH4 297 aa14.63□□□□□ -0.07
CMTM1-219ENST00000533953 B3GALT6Q96L58 329 aa14.63□□□□□ -0.07
CMTM1-219ENST00000533953 ACCSQ96QU6 501 aa14.63□□□□□ -0.07
CMTM1-219ENST00000533953 TMEM175Q9BSA9 504 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms