RNA–Protein interactions for RNA: ENST00000533870.1

SOX6-217, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 7,224 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-217ENST00000533870 PRR23CQ6ZRP0 262 aa4.29□□□□□ -1.72
SOX6-217ENST00000533870 BARGINQ6ZT62 677 aa4.29□□□□□ -1.72
SOX6-217ENST00000533870 GLYCTKQ8IVS8 523 aa4.29□□□□□ -1.72
SOX6-217ENST00000533870 COLGALT2Q8IYK4 626 aa4.29□□□□□ -1.72
SOX6-217ENST00000533870 ZNF564Q8TBZ8 553 aaPredicted RBP4.29□□□□□ -1.72
SOX6-217ENST00000533870 RIN2Q8WYP3 895 aaPredicted RBP4.29□□□□□ -1.72
SOX6-217ENST00000533870 MTMR8Q96EF0 704 aa4.29□□□□□ -1.72
SOX6-217ENST00000533870 FAM163AQ96GL9 167 aaPredicted RBP4.29□□□□□ -1.72
SOX6-217ENST00000533870 CCDC85AQ96PX6 553 aaPredicted RBP4.29□□□□□ -1.72
SOX6-217ENST00000533870 SETDB2Q96T68 719 aa4.29□□□□□ -1.72
SOX6-217ENST00000533870 TTC1Q99614 292 aa4.29□□□□□ -1.72
SOX6-217ENST00000533870 ZNF184Q99676 751 aaPredicted RBP4.29□□□□□ -1.72
SOX6-217ENST00000533870 SERPINB13Q9UIV8 391 aa4.29□□□□□ -1.72
SOX6-217ENST00000533870 AP3M1Q9Y2T2 418 aa4.29□□□□□ -1.72
SOX6-217ENST00000533870 ZNF233A6NK53 670 aa4.29□□□□□ -1.72
SOX6-217ENST00000533870 SAC3D1A6NKF1 404 aa4.29□□□□□ -1.72
SOX6-217ENST00000533870 GOLGA8CPA6NN73 597 aa4.29□□□□□ -1.72
SOX6-217ENST00000533870 KLF11O14901 512 aa4.29□□□□□ -1.72
SOX6-217ENST00000533870 PFDN6O15212 129 aa4.29□□□□□ -1.72
SOX6-217ENST00000533870 LSM8O95777 96 aaKnown RBP4.29□□□□□ -1.72
SOX6-217ENST00000533870 SNRPAP09012 282 aaKnown RBP4.29□□□□□ -1.72
SOX6-217ENST00000533870 FCGR1AP12314 374 aa4.29□□□□□ -1.72
SOX6-217ENST00000533870 YWHAGP61981 247 aaKnown RBP eCLIP4.29□□□□□ -1.72
SOX6-217ENST00000533870 GOLGA8FQ08AF8 430 aa4.29□□□□□ -1.72
SOX6-217ENST00000533870 GOLGA8DPQ0D2H9 430 aa4.29□□□□□ -1.72
SOX6-217ENST00000533870 INAQ16352 499 aa4.29□□□□□ -1.72
SOX6-217ENST00000533870 CYB5R4Q7L1T6 521 aa4.29□□□□□ -1.72
SOX6-217ENST00000533870 FBXO11Q86XK2 927 aa4.29□□□□□ -1.72
SOX6-217ENST00000533870 CTAGE3PQ8IX95 158 aa4.29□□□□□ -1.72
SOX6-217ENST00000533870 SUPT20HQ8NEM7 779 aa4.29□□□□□ -1.72
SOX6-217ENST00000533870 EXD1Q8NHP7 514 aa4.29□□□□□ -1.72
SOX6-217ENST00000533870 FAM81AQ8TBF8 368 aa4.29□□□□□ -1.72
SOX6-217ENST00000533870 OXER1Q8TDS5 423 aa4.29□□□□□ -1.72
SOX6-217ENST00000533870 WDR60Q8WVS4 1066 aa4.29□□□□□ -1.72
SOX6-217ENST00000533870 JARID2Q92833 1246 aaPredicted RBP4.29□□□□□ -1.72
SOX6-217ENST00000533870 ASCC2Q9H1I8 757 aaPredicted RBP4.29□□□□□ -1.72
SOX6-217ENST00000533870 FAM217BQ9NTX9 383 aaPredicted RBP4.29□□□□□ -1.72
SOX6-217ENST00000533870 MAP3K20Q9NYL2 800 aaKnown RBP4.29□□□□□ -1.72
SOX6-217ENST00000533870 REXO2Q9Y3B8 237 aaKnown RBP4.29□□□□□ -1.72
SOX6-217ENST00000533870 SLC22A2O15244 555 aa4.29□□□□□ -1.72
SOX6-217ENST00000533870 KLRC4O43908 158 aa4.29□□□□□ -1.72
SOX6-217ENST00000533870 PEX1O43933 1283 aa4.29□□□□□ -1.72
SOX6-217ENST00000533870 SRGAP2O75044 1071 aa4.29□□□□□ -1.72
SOX6-217ENST00000533870 WEE2P0C1S8 567 aa4.29□□□□□ -1.72
SOX6-217ENST00000533870 POLR2MP0CAP2 368 aa4.29□□□□□ -1.72
SOX6-217ENST00000533870 GNAT1P11488 350 aa4.29□□□□□ -1.72
SOX6-217ENST00000533870 S100A1P23297 94 aa4.29□□□□□ -1.72
SOX6-217ENST00000533870 TOB1P50616 345 aaPredicted RBP4.29□□□□□ -1.72
SOX6-217ENST00000533870 HDLBPQ00341 1268 aaKnown RBP4.29□□□□□ -1.72
SOX6-217ENST00000533870 KRT72Q14CN4 511 aa4.29□□□□□ -1.72
SOX6-217ENST00000533870 ZCWPW2Q504Y3 356 aa4.29□□□□□ -1.72
SOX6-217ENST00000533870 BOLA3Q53S33 107 aa4.29□□□□□ -1.72
SOX6-217ENST00000533870 TRIM68Q6AZZ1 485 aa4.29□□□□□ -1.72
SOX6-217ENST00000533870 TTC19Q6DKK2 380 aaPredicted RBP4.29□□□□□ -1.72
SOX6-217ENST00000533870 DNAJC24Q6P3W2 148 aa4.29□□□□□ -1.72
SOX6-217ENST00000533870 USP49Q70CQ1 688 aa4.29□□□□□ -1.72
SOX6-217ENST00000533870 PIGWQ7Z7B1 504 aa4.29□□□□□ -1.72
SOX6-217ENST00000533870 ZNF34Q8IZ26 560 aa4.29□□□□□ -1.72
SOX6-217ENST00000533870 SPDYE1Q8NFV5 336 aaPredicted RBP4.29□□□□□ -1.72
SOX6-217ENST00000533870 ACMSDQ8TDX5 336 aa4.29□□□□□ -1.72
SOX6-217ENST00000533870 SCG3Q8WXD2 468 aaKnown RBP4.29□□□□□ -1.72
SOX6-217ENST00000533870 BAP1Q92560 729 aa4.29□□□□□ -1.72
SOX6-217ENST00000533870 FAM167AQ96KS9 214 aa4.29□□□□□ -1.72
SOX6-217ENST00000533870 DUSP9Q99956 384 aaKnown RBP4.29□□□□□ -1.72
SOX6-217ENST00000533870 BTBD7Q9P203 1132 aa4.29□□□□□ -1.72
SOX6-217ENST00000533870 A0A087X0T9 212 aa4.29□□□□□ -1.72
SOX6-217ENST00000533870 EDF1O60869 148 aaKnown RBP4.29□□□□□ -1.72
SOX6-217ENST00000533870 H2AFYO75367 372 aaKnown RBP4.29□□□□□ -1.72
SOX6-217ENST00000533870 GCNT3O95395 438 aa4.29□□□□□ -1.72
SOX6-217ENST00000533870 A1BGP04217 495 aa4.29□□□□□ -1.72
SOX6-217ENST00000533870 FAM228BP0C875 321 aa4.29□□□□□ -1.72
SOX6-217ENST00000533870 ABCB4P21439 1286 aa4.29□□□□□ -1.72
SOX6-217ENST00000533870 BMP6P22004 513 aa4.29□□□□□ -1.72
SOX6-217ENST00000533870 CDC25AP30304 524 aa4.29□□□□□ -1.72
SOX6-217ENST00000533870 TECP42680 631 aa4.29□□□□□ -1.72
SOX6-217ENST00000533870 AUHQ13825 339 aaKnown RBP4.29□□□□□ -1.72
SOX6-217ENST00000533870 MESDQ14696 234 aa4.29□□□□□ -1.72
SOX6-217ENST00000533870 PDK4Q16654 411 aa4.29□□□□□ -1.72
SOX6-217ENST00000533870 MAPK6Q16659 721 aa4.29□□□□□ -1.72
SOX6-217ENST00000533870 TTMPQ5BVD1 217 aa4.29□□□□□ -1.72
SOX6-217ENST00000533870 HYIQ5T013 277 aa4.29□□□□□ -1.72
SOX6-217ENST00000533870 ACAD11Q709F0 780 aa4.29□□□□□ -1.72
SOX6-217ENST00000533870 HACE1Q8IYU2 909 aa4.29□□□□□ -1.72
SOX6-217ENST00000533870 ALDH16A1Q8IZ83 802 aa4.29□□□□□ -1.72
SOX6-217ENST00000533870 TNFRSF25Q93038 417 aa4.29□□□□□ -1.72
SOX6-217ENST00000533870 DGCR14Q96DF8 476 aaKnown RBP4.29□□□□□ -1.72
SOX6-217ENST00000533870 CLMNQ96JQ2 1002 aa4.29□□□□□ -1.72
SOX6-217ENST00000533870 ST6GALNAC4Q9H4F1 302 aa4.29□□□□□ -1.72
SOX6-217ENST00000533870 PTTG2Q9NZH5 202 aa4.29□□□□□ -1.72
SOX6-217ENST00000533870 BFARQ9NZS9 450 aa4.29□□□□□ -1.72
SOX6-217ENST00000533870 TAGLN3Q9UI15 199 aa4.29□□□□□ -1.72
SOX6-217ENST00000533870 C10orf71Q711Q0 1435 aa4.29□□□□□ -1.72
SOX6-217ENST00000533870 AGPSO00116 658 aa4.29□□□□□ -1.72
SOX6-217ENST00000533870 MGEA5O60502 916 aa4.29□□□□□ -1.72
SOX6-217ENST00000533870 IFNB1P01574 187 aa4.29□□□□□ -1.72
SOX6-217ENST00000533870 CYP2C8P10632 490 aa4.29□□□□□ -1.72
SOX6-217ENST00000533870 ACAT1P24752 427 aaKnown RBP4.29□□□□□ -1.72
SOX6-217ENST00000533870 PHEXP78562 749 aa4.29□□□□□ -1.72
SOX6-217ENST00000533870 STX5Q13190 355 aa4.29□□□□□ -1.72
SOX6-217ENST00000533870 PPIL2Q13356 520 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms