RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 LAG3P18627 525 aa13.11□□□□□ -0.31
SSBP3-214ENST00000533209 HOXD13P35453 343 aa13.11□□□□□ -0.31
SSBP3-214ENST00000533209 SCNN1GP51170 649 aa13.11□□□□□ -0.31
SSBP3-214ENST00000533209 OSTNP61366 133 aa13.11□□□□□ -0.31
SSBP3-214ENST00000533209 UBE2HP62256 183 aa13.11□□□□□ -0.31
SSBP3-214ENST00000533209 ADGRE1Q14246 886 aa13.11□□□□□ -0.31
SSBP3-214ENST00000533209 POSTNQ15063 836 aa13.11□□□□□ -0.31
SSBP3-214ENST00000533209 KMT5BQ4FZB7 885 aa13.11□□□□□ -0.31
SSBP3-214ENST00000533209 SPOUT1Q5T280 376 aaKnown RBP13.11□□□□□ -0.31
SSBP3-214ENST00000533209 ZNF280BQ86YH2 543 aa13.11□□□□□ -0.31
SSBP3-214ENST00000533209 GDPD5Q8WTR4 605 aa13.11□□□□□ -0.31
SSBP3-214ENST00000533209 CCDC94Q9BW85 323 aaPredicted RBP13.11□□□□□ -0.31
SSBP3-214ENST00000533209 PLVAPQ9BX97 442 aa13.11□□□□□ -0.31
SSBP3-214ENST00000533209 NRDE2Q9H7Z3 1164 aa13.11□□□□□ -0.31
SSBP3-214ENST00000533209 SLC39A2Q9NP94 309 aa13.11□□□□□ -0.31
SSBP3-214ENST00000533209 EXOC1Q9NV70 894 aa13.11□□□□□ -0.31
SSBP3-214ENST00000533209 PLAGL2Q9UPG8 496 aa13.11□□□□□ -0.31
SSBP3-214ENST00000533209 EXOC7Q9UPT5 735 aa13.11□□□□□ -0.31
SSBP3-214ENST00000533209 PTGESO14684 152 aa13.1□□□□□ -0.31
SSBP3-214ENST00000533209 EIF3DO15371 548 aaKnown RBP eCLIP13.1□□□□□ -0.31
SSBP3-214ENST00000533209 MEFVO15553 781 aaPredicted RBP13.1□□□□□ -0.31
SSBP3-214ENST00000533209 DDHD2O94830 711 aa13.1□□□□□ -0.31
SSBP3-214ENST00000533209 ITGB1P05556 798 aa13.1□□□□□ -0.31
SSBP3-214ENST00000533209 ADSSP30520 456 aa13.1□□□□□ -0.31
SSBP3-214ENST00000533209 PBX3P40426 434 aa13.1□□□□□ -0.31
SSBP3-214ENST00000533209 MATR3P43243 847 aaKnown RBP eCLIP13.1□□□□□ -0.31
SSBP3-214ENST00000533209 RNASELQ05823 741 aaKnown RBP13.1□□□□□ -0.31
SSBP3-214ENST00000533209 STK4Q13043 487 aa13.1□□□□□ -0.31
SSBP3-214ENST00000533209 GPM6BQ13491 265 aa13.1□□□□□ -0.31
SSBP3-214ENST00000533209 PNOCQ13519 176 aa13.1□□□□□ -0.31
SSBP3-214ENST00000533209 SEZ6Q53EL9 994 aa13.1□□□□□ -0.31
SSBP3-214ENST00000533209 KCNT2Q6UVM3 1135 aa13.1□□□□□ -0.31
SSBP3-214ENST00000533209 STXBP4Q6ZWJ1 553 aa13.1□□□□□ -0.31
SSBP3-214ENST00000533209 KLHL23Q8NBE8 558 aa13.1□□□□□ -0.31
SSBP3-214ENST00000533209 ZNF507Q8TCN5 953 aa13.1□□□□□ -0.31
SSBP3-214ENST00000533209 SCFD1Q8WVM8 642 aa13.1□□□□□ -0.31
SSBP3-214ENST00000533209 P2RX5Q93086 422 aa13.1□□□□□ -0.31
SSBP3-214ENST00000533209 ZNF558Q96NG5 402 aa13.1□□□□□ -0.31
SSBP3-214ENST00000533209 ACAP3Q96P50 834 aa13.1□□□□□ -0.31
SSBP3-214ENST00000533209 C11orf84Q9BUA3 381 aaPredicted RBP13.1□□□□□ -0.31
SSBP3-214ENST00000533209 MSTO1Q9BUK6 570 aa13.1□□□□□ -0.31
SSBP3-214ENST00000533209 GBP3Q9H0R5 595 aa13.1□□□□□ -0.31
SSBP3-214ENST00000533209 AAASQ9NRG9 546 aa13.1□□□□□ -0.31
SSBP3-214ENST00000533209 DNAJB4Q9UDY4 337 aa13.1□□□□□ -0.31
SSBP3-214ENST00000533209 PCDHB12Q9Y5F1 795 aa13.1□□□□□ -0.31
SSBP3-214ENST00000533209 OGTO15294 1046 aa13.09□□□□□ -0.31
SSBP3-214ENST00000533209 ZC3H11AO75152 810 aaKnown RBP eCLIP13.09□□□□□ -0.31
SSBP3-214ENST00000533209 RHOBTB3O94955 611 aa13.09□□□□□ -0.31
SSBP3-214ENST00000533209 GALTP07902 379 aa13.09□□□□□ -0.31
SSBP3-214ENST00000533209 CLTAP09496 248 aa13.09□□□□□ -0.31
SSBP3-214ENST00000533209 POU3F3P20264 500 aaPredicted RBP13.09□□□□□ -0.31
SSBP3-214ENST00000533209 SLC11A1P49279 550 aa13.09□□□□□ -0.31
SSBP3-214ENST00000533209 BCAR1P56945 870 aa13.09□□□□□ -0.31
SSBP3-214ENST00000533209 DSC1Q08554 894 aa13.09□□□□□ -0.31
SSBP3-214ENST00000533209 GRIK3Q13003 919 aa13.09□□□□□ -0.31
SSBP3-214ENST00000533209 PSMD2Q13200 908 aa13.09□□□□□ -0.31
SSBP3-214ENST00000533209 KCNB1Q14721 858 aa13.09□□□□□ -0.31
SSBP3-214ENST00000533209 NAB2Q15742 525 aa13.09□□□□□ -0.31
SSBP3-214ENST00000533209 BMT2Q1RMZ1 405 aa13.09□□□□□ -0.31
SSBP3-214ENST00000533209 XKR4Q5GH76 650 aa13.09□□□□□ -0.31
SSBP3-214ENST00000533209 ZBTB41Q5SVQ8 909 aa13.09□□□□□ -0.31
SSBP3-214ENST00000533209 SLFN12LQ6IEE8 588 aa13.09□□□□□ -0.31
SSBP3-214ENST00000533209 ALKAL1Q6UXT8 129 aa13.09□□□□□ -0.31
SSBP3-214ENST00000533209 ELOA2Q8IYF1 753 aaPredicted RBP13.09□□□□□ -0.31
SSBP3-214ENST00000533209 COLGALT2Q8IYK4 626 aa13.09□□□□□ -0.31
SSBP3-214ENST00000533209 SYCP3Q8IZU3 236 aa13.09□□□□□ -0.31
SSBP3-214ENST00000533209 KIAA0895Q8NCT3 520 aa13.09□□□□□ -0.31
SSBP3-214ENST00000533209 CCDC34Q96HJ3 373 aa13.09□□□□□ -0.31
SSBP3-214ENST00000533209 SNX27Q96L92 541 aa13.09□□□□□ -0.31
SSBP3-214ENST00000533209 RPS6KC1Q96S38 1066 aa13.09□□□□□ -0.31
SSBP3-214ENST00000533209 GAS2L1Q99501 681 aaPredicted RBP13.09□□□□□ -0.31
SSBP3-214ENST00000533209 TMEM206Q9H813 350 aa13.09□□□□□ -0.31
SSBP3-214ENST00000533209 UBE4BO95155 1302 aa13.09□□□□□ -0.31
SSBP3-214ENST00000533209 NT5C1B-RDH14C9J2C7 533 aa13.08□□□□□ -0.32
SSBP3-214ENST00000533209 GRM6O15303 877 aa13.08□□□□□ -0.32
SSBP3-214ENST00000533209 KINO60870 393 aaKnown RBP13.08□□□□□ -0.32
SSBP3-214ENST00000533209 FGF18O76093 207 aa13.08□□□□□ -0.32
SSBP3-214ENST00000533209 TNFSF9P41273 254 aa13.08□□□□□ -0.32
SSBP3-214ENST00000533209 ALDH7A1P49419 539 aaKnown RBP13.08□□□□□ -0.32
SSBP3-214ENST00000533209 YARSP54577 528 aaKnown RBP13.08□□□□□ -0.32
SSBP3-214ENST00000533209 KYAT1Q16773 422 aa13.08□□□□□ -0.32
SSBP3-214ENST00000533209 SLC10A6Q3KNW5 377 aa13.08□□□□□ -0.32
SSBP3-214ENST00000533209 NELFCDQ8IXH7 590 aa13.08□□□□□ -0.32
SSBP3-214ENST00000533209 SLC39A11Q8N1S5 342 aa13.08□□□□□ -0.32
SSBP3-214ENST00000533209 SPATA20Q8TB22 786 aa13.08□□□□□ -0.32
SSBP3-214ENST00000533209 SPPL3Q8TCT6 385 aa13.08□□□□□ -0.32
SSBP3-214ENST00000533209 CCDC47Q96A33 483 aaKnown RBP13.08□□□□□ -0.32
SSBP3-214ENST00000533209 GBP4Q96PP9 640 aa13.08□□□□□ -0.32
SSBP3-214ENST00000533209 FAM193BQ96PV7 902 aaPredicted RBP13.08□□□□□ -0.32
SSBP3-214ENST00000533209 PPP1R10Q96QC0 940 aaKnown RBP13.08□□□□□ -0.32
SSBP3-214ENST00000533209 TMEM175Q9BSA9 504 aa13.08□□□□□ -0.32
SSBP3-214ENST00000533209 ALG13Q9NP73 1137 aaKnown RBP13.08□□□□□ -0.32
SSBP3-214ENST00000533209 TOPORSQ9NS56 1045 aaPredicted RBP13.08□□□□□ -0.32
SSBP3-214ENST00000533209 LMBRD1Q9NUN5 540 aa13.08□□□□□ -0.32
SSBP3-214ENST00000533209 SPG21Q9NZD8 308 aa13.08□□□□□ -0.32
SSBP3-214ENST00000533209 CPSF3Q9UKF6 684 aaKnown RBP13.08□□□□□ -0.32
SSBP3-214ENST00000533209 AGO2Q9UKV8 859 aaKnown RBP13.08□□□□□ -0.32
SSBP3-214ENST00000533209 MTCH2Q9Y6C9 303 aa13.08□□□□□ -0.32
SSBP3-214ENST00000533209 MYO9BQ13459 2157 aa13.08□□□□□ -0.32
SSBP3-214ENST00000533209 SMIM28A0A1B0GU29 152 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms