RNA–Protein interactions for RNA: ENST00000533145.5

HIF3A-215, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-215ENST00000533145 TMX1Q9H3N1 280 aa15.34■□□□□ 0.05
HIF3A-215ENST00000533145 TRIP11Q15643 1979 aa15.34■□□□□ 0.05
HIF3A-215ENST00000533145 CBFA2T2O43439 604 aa15.33■□□□□ 0.04
HIF3A-215ENST00000533145 NBNO60934 754 aa15.33■□□□□ 0.04
HIF3A-215ENST00000533145 ZNF623O75123 536 aa15.33■□□□□ 0.04
HIF3A-215ENST00000533145 TIMP1P01033 207 aa15.33■□□□□ 0.04
HIF3A-215ENST00000533145 CLTAP09496 248 aa15.33■□□□□ 0.04
HIF3A-215ENST00000533145 KRT13P13646 458 aa15.33■□□□□ 0.04
HIF3A-215ENST00000533145 RFC2P35250 354 aa15.33■□□□□ 0.04
HIF3A-215ENST00000533145 ACOT2P49753 483 aa15.33■□□□□ 0.04
HIF3A-215ENST00000533145 PSMD6Q15008 389 aa15.33■□□□□ 0.04
HIF3A-215ENST00000533145 SURF1Q15526 300 aa15.33■□□□□ 0.04
HIF3A-215ENST00000533145 FILIP1LQ4L180 1135 aa15.33■□□□□ 0.04
HIF3A-215ENST00000533145 USP37Q86T82 979 aa15.33■□□□□ 0.04
HIF3A-215ENST00000533145 BRSK2Q8IWQ3 736 aa15.33■□□□□ 0.04
HIF3A-215ENST00000533145 TET1Q8NFU7 2136 aa15.33■□□□□ 0.04
HIF3A-215ENST00000533145 APBB2Q92870 758 aa15.33■□□□□ 0.04
HIF3A-215ENST00000533145 SLC35C1Q96A29 364 aa15.33■□□□□ 0.04
HIF3A-215ENST00000533145 NAP1L5Q96NT1 182 aaPredicted RBP15.33■□□□□ 0.04
HIF3A-215ENST00000533145 FTHL17Q9BXU8 183 aa15.33■□□□□ 0.04
HIF3A-215ENST00000533145 IFIH1Q9BYX4 1025 aaKnown RBP15.33■□□□□ 0.04
HIF3A-215ENST00000533145 WNT8AQ9H1J5 351 aa15.33■□□□□ 0.04
HIF3A-215ENST00000533145 RTN4Q9NQC3 1192 aaKnown RBP15.33■□□□□ 0.04
HIF3A-215ENST00000533145 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.33■□□□□ 0.04
HIF3A-215ENST00000533145 DNAH12Q6ZR08 3092 aa15.33■□□□□ 0.04
HIF3A-215ENST00000533145 UMODL1Q5DID0 1318 aa15.33■□□□□ 0.04
HIF3A-215ENST00000533145 RALGAPA2Q2PPJ7 1873 aa15.33■□□□□ 0.04
HIF3A-215ENST00000533145 PDCD11Q14690 1871 aaKnown RBP15.32■□□□□ 0.04
HIF3A-215ENST00000533145 PMM2O15305 246 aa15.32■□□□□ 0.04
HIF3A-215ENST00000533145 NPTXRO95502 500 aa15.32■□□□□ 0.04
HIF3A-215ENST00000533145 TPM2P07951 284 aa15.32■□□□□ 0.04
HIF3A-215ENST00000533145 STAG3L1P0CL83 205 aa15.32■□□□□ 0.04
HIF3A-215ENST00000533145 SKIP12755 728 aa15.32■□□□□ 0.04
HIF3A-215ENST00000533145 TNFSF9P41273 254 aa15.32■□□□□ 0.04
HIF3A-215ENST00000533145 VAMP7P51809 220 aa15.32■□□□□ 0.04
HIF3A-215ENST00000533145 VWA3BQ502W6 1294 aa15.32■□□□□ 0.04
HIF3A-215ENST00000533145 ZBTB41Q5SVQ8 909 aa15.32■□□□□ 0.04
HIF3A-215ENST00000533145 MRPL10Q7Z7H8 261 aaKnown RBP15.32■□□□□ 0.04
HIF3A-215ENST00000533145 CREBRFQ8IUR6 639 aa15.32■□□□□ 0.04
HIF3A-215ENST00000533145 THNSL1Q8IYQ7 743 aa15.32■□□□□ 0.04
HIF3A-215ENST00000533145 CEP120Q8N960 986 aa15.32■□□□□ 0.04
HIF3A-215ENST00000533145 PLEKHO2Q8TD55 490 aa15.32■□□□□ 0.04
HIF3A-215ENST00000533145 ACAP3Q96P50 834 aa15.32■□□□□ 0.04
HIF3A-215ENST00000533145 EIF2AQ9BY44 585 aaKnown RBP15.32■□□□□ 0.04
HIF3A-215ENST00000533145 TRIM5Q9C035 493 aa15.32■□□□□ 0.04
HIF3A-215ENST00000533145 VPS16Q9H269 839 aa15.32■□□□□ 0.04
HIF3A-215ENST00000533145 NDST4Q9H3R1 872 aa15.32■□□□□ 0.04
HIF3A-215ENST00000533145 PLEKHA5Q9HAU0 1116 aa15.32■□□□□ 0.04
HIF3A-215ENST00000533145 RGS18Q9NS28 235 aa15.32■□□□□ 0.04
HIF3A-215ENST00000533145 TAB2Q9NYJ8 693 aa15.32■□□□□ 0.04
HIF3A-215ENST00000533145 IFNKQ9P0W0 207 aa15.32■□□□□ 0.04
HIF3A-215ENST00000533145 A0A0U1RQF3 1178 aa15.31■□□□□ 0.04
HIF3A-215ENST00000533145 TRIM43BA6NCK2 446 aa15.31■□□□□ 0.04
HIF3A-215ENST00000533145 LGALS16A8MUM7 142 aa15.31■□□□□ 0.04
HIF3A-215ENST00000533145 MGEA5O60502 916 aa15.31■□□□□ 0.04
HIF3A-215ENST00000533145 IL18RAPO95256 599 aa15.31■□□□□ 0.04
HIF3A-215ENST00000533145 HARSP12081 509 aaKnown RBP15.31■□□□□ 0.04
HIF3A-215ENST00000533145 GTF2H1P32780 548 aa15.31■□□□□ 0.04
HIF3A-215ENST00000533145 CYP2C18P33260 490 aa15.31■□□□□ 0.04
HIF3A-215ENST00000533145 RAB27AP51159 221 aa15.31■□□□□ 0.04
HIF3A-215ENST00000533145 FAM189BP81408 668 aa15.31■□□□□ 0.04
HIF3A-215ENST00000533145 KCNH2Q12809 1159 aa15.31■□□□□ 0.04
HIF3A-215ENST00000533145 ENOX2Q16206 610 aaKnown RBP15.31■□□□□ 0.04
HIF3A-215ENST00000533145 C1orf220Q5T0J3 134 aa15.31■□□□□ 0.04
HIF3A-215ENST00000533145 PRPF38BQ5VTL8 546 aaKnown RBP15.31■□□□□ 0.04
HIF3A-215ENST00000533145 TWF2Q6IBS0 349 aaKnown RBP15.31■□□□□ 0.04
HIF3A-215ENST00000533145 RTN4RL1Q86UN2 441 aaPredicted RBP15.31■□□□□ 0.04
HIF3A-215ENST00000533145 CD302Q8IX05 232 aa15.31■□□□□ 0.04
HIF3A-215ENST00000533145 SMG8Q8ND04 991 aaKnown RBP15.31■□□□□ 0.04
HIF3A-215ENST00000533145 SEPT8Q92599 483 aa15.31■□□□□ 0.04
HIF3A-215ENST00000533145 TRIM43Q96BQ3 446 aaPredicted RBP15.31■□□□□ 0.04
HIF3A-215ENST00000533145 MRFAP1L1Q96HT8 127 aa15.31■□□□□ 0.04
HIF3A-215ENST00000533145 TSPAN18Q96SJ8 248 aa15.31■□□□□ 0.04
HIF3A-215ENST00000533145 CCDC94Q9BW85 323 aaPredicted RBP15.31■□□□□ 0.04
HIF3A-215ENST00000533145 TRIM6Q9C030 488 aaPredicted RBP15.31■□□□□ 0.04
HIF3A-215ENST00000533145 XPO4Q9C0E2 1151 aaKnown RBP15.31■□□□□ 0.04
HIF3A-215ENST00000533145 ASB7Q9H672 318 aa15.31■□□□□ 0.04
HIF3A-215ENST00000533145 RPF1Q9H9Y2 349 aaKnown RBP15.31■□□□□ 0.04
HIF3A-215ENST00000533145 FAM105AQ9NUU6 356 aa15.31■□□□□ 0.04
HIF3A-215ENST00000533145 RBAKQ9NYW8 714 aaPredicted RBP15.31■□□□□ 0.04
HIF3A-215ENST00000533145 TTC26A0AVF1 554 aa15.3■□□□□ 0.04
HIF3A-215ENST00000533145 P4HA2O15460 535 aa15.3■□□□□ 0.04
HIF3A-215ENST00000533145 STX10O60499 249 aa15.3■□□□□ 0.04
HIF3A-215ENST00000533145 AFPP02771 609 aaKnown RBP15.3■□□□□ 0.04
HIF3A-215ENST00000533145 TPM3P06753 285 aa15.3■□□□□ 0.04
HIF3A-215ENST00000533145 ZNF75DP51815 510 aa15.3■□□□□ 0.04
HIF3A-215ENST00000533145 AP3M2P53677 418 aa15.3■□□□□ 0.04
HIF3A-215ENST00000533145 CCL23P55773 120 aa15.3■□□□□ 0.04
HIF3A-215ENST00000533145 PLCB2Q00722 1185 aa15.3■□□□□ 0.04
HIF3A-215ENST00000533145 SLC10A6Q3KNW5 377 aa15.3■□□□□ 0.04
HIF3A-215ENST00000533145 SEZ6Q53EL9 994 aa15.3■□□□□ 0.04
HIF3A-215ENST00000533145 XKR4Q5GH76 650 aa15.3■□□□□ 0.04
HIF3A-215ENST00000533145 ALKAL1Q6UXT8 129 aa15.3■□□□□ 0.04
HIF3A-215ENST00000533145 TMEM192Q8IY95 271 aa15.3■□□□□ 0.04
HIF3A-215ENST00000533145 DBF4BQ8NFT6 615 aa15.3■□□□□ 0.04
HIF3A-215ENST00000533145 SCLYQ96I15 445 aa15.3■□□□□ 0.04
HIF3A-215ENST00000533145 ADAM2Q99965 735 aa15.3■□□□□ 0.04
HIF3A-215ENST00000533145 PPP1R12CQ9BZL4 782 aa15.3■□□□□ 0.04
HIF3A-215ENST00000533145 TSPYL2Q9H2G4 693 aaPredicted RBP15.3■□□□□ 0.04
HIF3A-215ENST00000533145 C1orf112Q9NSG2 853 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms