RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 ABI1Q8IZP0 508 aa16.28■□□□□ 0.2
PCDHA3-202ENST00000532566 DDX4Q9NQI0 724 aaKnown RBP16.28■□□□□ 0.2
PCDHA3-202ENST00000532566 POLRMTO00411 1230 aaKnown RBP16.28■□□□□ 0.2
PCDHA3-202ENST00000532566 PPP1R37O75864 691 aa16.28■□□□□ 0.2
PCDHA3-202ENST00000532566 PRLRP16471 622 aa16.28■□□□□ 0.2
PCDHA3-202ENST00000532566 GMPSP49915 693 aaPredicted RBP16.28■□□□□ 0.2
PCDHA3-202ENST00000532566 PSMD6Q15008 389 aa16.28■□□□□ 0.2
PCDHA3-202ENST00000532566 WDR72Q3MJ13 1102 aa16.28■□□□□ 0.2
PCDHA3-202ENST00000532566 WDR93Q6P2C0 686 aa16.28■□□□□ 0.2
PCDHA3-202ENST00000532566 DSTYKQ6XUX3 929 aa16.28■□□□□ 0.2
PCDHA3-202ENST00000532566 SH2D3CQ8N5H7 860 aa16.28■□□□□ 0.2
PCDHA3-202ENST00000532566 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.28■□□□□ 0.2
PCDHA3-202ENST00000532566 C17orf75Q9HAS0 396 aa16.28■□□□□ 0.2
PCDHA3-202ENST00000532566 TXNDC9O14530 226 aa16.28■□□□□ 0.2
PCDHA3-202ENST00000532566 ARP10275 920 aa16.28■□□□□ 0.2
PCDHA3-202ENST00000532566 PPM1FP49593 454 aaPredicted RBP16.28■□□□□ 0.2
PCDHA3-202ENST00000532566 RPS6KA2Q15349 733 aa16.28■□□□□ 0.2
PCDHA3-202ENST00000532566 BEND6Q5SZJ8 279 aaPredicted RBP16.28■□□□□ 0.2
PCDHA3-202ENST00000532566 FAM102AQ5T9C2 384 aaPredicted RBP16.28■□□□□ 0.2
PCDHA3-202ENST00000532566 FASTKD5Q7L8L6 764 aaKnown RBP16.28■□□□□ 0.2
PCDHA3-202ENST00000532566 CCDC68Q9H2F9 335 aa16.28■□□□□ 0.2
PCDHA3-202ENST00000532566 GOLGA8MH3BSY2 632 aa16.27■□□□□ 0.2
PCDHA3-202ENST00000532566 HUS1O60921 280 aa16.27■□□□□ 0.2
PCDHA3-202ENST00000532566 RCN2Q14257 317 aa16.27■□□□□ 0.2
PCDHA3-202ENST00000532566 ARL13BQ3SXY8 428 aa16.27■□□□□ 0.2
PCDHA3-202ENST00000532566 CPA5Q8WXQ8 436 aa16.27■□□□□ 0.2
PCDHA3-202ENST00000532566 GPRASP2Q96D09 838 aa16.27■□□□□ 0.2
PCDHA3-202ENST00000532566 DUSP9Q99956 384 aaKnown RBP16.27■□□□□ 0.2
PCDHA3-202ENST00000532566 IPO11Q9UI26 975 aaKnown RBP16.27■□□□□ 0.2
PCDHA3-202ENST00000532566 MRC1P22897 1456 aa16.27■□□□□ 0.2
PCDHA3-202ENST00000532566 HLA-DRAP01903 254 aa16.27■□□□□ 0.2
PCDHA3-202ENST00000532566 COMTP21964 271 aa16.27■□□□□ 0.2
PCDHA3-202ENST00000532566 SSTR3P32745 418 aaPredicted RBP16.27■□□□□ 0.2
PCDHA3-202ENST00000532566 BYSLQ13895 437 aaKnown RBP16.27■□□□□ 0.2
PCDHA3-202ENST00000532566 EPM2AIP1Q7L775 607 aaPredicted RBP16.27■□□□□ 0.2
PCDHA3-202ENST00000532566 RBBP8NLQ8NC74 664 aaPredicted RBP16.27■□□□□ 0.2
PCDHA3-202ENST00000532566 FUT8Q9BYC5 575 aa16.27■□□□□ 0.2
PCDHA3-202ENST00000532566 CARD9Q9H257 536 aa16.27■□□□□ 0.2
PCDHA3-202ENST00000532566 CYP26B1Q9NR63 512 aa16.27■□□□□ 0.2
PCDHA3-202ENST00000532566 LRRC10BA6NIK2 292 aa16.27■□□□□ 0.19
PCDHA3-202ENST00000532566 IRX4P78413 519 aa16.27■□□□□ 0.19
PCDHA3-202ENST00000532566 GUCY1A3Q02108 690 aa16.27■□□□□ 0.19
PCDHA3-202ENST00000532566 KLHL38Q2WGJ6 581 aa16.27■□□□□ 0.19
PCDHA3-202ENST00000532566 TEX2Q8IWB9 1127 aa16.27■□□□□ 0.19
PCDHA3-202ENST00000532566 TPCN2Q8NHX9 752 aa16.27■□□□□ 0.19
PCDHA3-202ENST00000532566 GGA3Q9NZ52 723 aa16.27■□□□□ 0.19
PCDHA3-202ENST00000532566 ASPHQ12797 758 aa16.26■□□□□ 0.19
PCDHA3-202ENST00000532566 FAM47EQ6ZV65 393 aa16.26■□□□□ 0.19
PCDHA3-202ENST00000532566 MICAL1Q8TDZ2 1067 aa16.26■□□□□ 0.19
PCDHA3-202ENST00000532566 EHD2Q9NZN4 543 aa16.26■□□□□ 0.19
PCDHA3-202ENST00000532566 AKAP3O75969 853 aa16.26■□□□□ 0.19
PCDHA3-202ENST00000532566 OATP04181 439 aa16.26■□□□□ 0.19
PCDHA3-202ENST00000532566 BMP6P22004 513 aa16.26■□□□□ 0.19
PCDHA3-202ENST00000532566 RFC5P40937 340 aa16.26■□□□□ 0.19
PCDHA3-202ENST00000532566 SESN3P58005 492 aa16.26■□□□□ 0.19
PCDHA3-202ENST00000532566 PRAMEF18Q5VWM3 479 aa16.26■□□□□ 0.19
PCDHA3-202ENST00000532566 C15orf52Q6ZUT6 534 aaKnown RBP16.26■□□□□ 0.19
PCDHA3-202ENST00000532566 SAMD7Q7Z3H4 446 aa16.26■□□□□ 0.19
PCDHA3-202ENST00000532566 SMYD2Q9NRG4 433 aa16.26■□□□□ 0.19
PCDHA3-202ENST00000532566 MAPK13O15264 365 aa16.26■□□□□ 0.19
PCDHA3-202ENST00000532566 VEGFAP15692 232 aaPredicted RBP16.26■□□□□ 0.19
PCDHA3-202ENST00000532566 TWF2Q6IBS0 349 aaKnown RBP16.26■□□□□ 0.19
PCDHA3-202ENST00000532566 LRIG3Q6UXM1 1119 aa16.26■□□□□ 0.19
PCDHA3-202ENST00000532566 SYDE1Q6ZW31 735 aaPredicted RBP16.26■□□□□ 0.19
PCDHA3-202ENST00000532566 SLC16A10Q8TF71 515 aa16.26■□□□□ 0.19
PCDHA3-202ENST00000532566 BLOC1S4Q9NUP1 217 aa16.26■□□□□ 0.19
PCDHA3-202ENST00000532566 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.26■□□□□ 0.19
PCDHA3-202ENST00000532566 TBX20Q9UMR3 447 aa16.26■□□□□ 0.19
PCDHA3-202ENST00000532566 AFG3L2Q9Y4W6 797 aa16.26■□□□□ 0.19
PCDHA3-202ENST00000532566 BAG2O95816 211 aa16.26■□□□□ 0.19
PCDHA3-202ENST00000532566 KRT3P12035 628 aa16.26■□□□□ 0.19
PCDHA3-202ENST00000532566 FGFR4P22455 802 aa16.26■□□□□ 0.19
PCDHA3-202ENST00000532566 BCAR1P56945 870 aa16.26■□□□□ 0.19
PCDHA3-202ENST00000532566 JAMLQ86YT9 394 aa16.26■□□□□ 0.19
PCDHA3-202ENST00000532566 BBS5Q8N3I7 341 aa16.26■□□□□ 0.19
PCDHA3-202ENST00000532566 CHMP6Q96FZ7 201 aa16.26■□□□□ 0.19
PCDHA3-202ENST00000532566 MLXIPLQ9NP71 852 aa16.26■□□□□ 0.19
PCDHA3-202ENST00000532566 PFDN4Q9NQP4 134 aa16.26■□□□□ 0.19
PCDHA3-202ENST00000532566 OLFML3Q9NRN5 406 aa16.26■□□□□ 0.19
PCDHA3-202ENST00000532566 TLK1Q9UKI8 766 aa16.26■□□□□ 0.19
PCDHA3-202ENST00000532566 ATP8B3O60423 1300 aa16.25■□□□□ 0.19
PCDHA3-202ENST00000532566 KRT38O76015 456 aa16.25■□□□□ 0.19
PCDHA3-202ENST00000532566 GNAT1P11488 350 aa16.25■□□□□ 0.19
PCDHA3-202ENST00000532566 DEPDC1BQ8WUY9 529 aa16.25■□□□□ 0.19
PCDHA3-202ENST00000532566 C18orf8Q96DM3 657 aa16.25■□□□□ 0.19
PCDHA3-202ENST00000532566 ISCUQ9H1K1 167 aa16.25■□□□□ 0.19
PCDHA3-202ENST00000532566 GAKO14976 1311 aa16.25■□□□□ 0.19
PCDHA3-202ENST00000532566 FOXP2O15409 715 aa16.25■□□□□ 0.19
PCDHA3-202ENST00000532566 RHBDL3P58872 404 aa16.25■□□□□ 0.19
PCDHA3-202ENST00000532566 PDIA2Q13087 525 aaKnown RBP16.25■□□□□ 0.19
PCDHA3-202ENST00000532566 E2F5Q15329 346 aa16.25■□□□□ 0.19
PCDHA3-202ENST00000532566 TMEM119Q4V9L6 283 aa16.25■□□□□ 0.19
PCDHA3-202ENST00000532566 MMS22LQ6ZRQ5 1243 aa16.25■□□□□ 0.19
PCDHA3-202ENST00000532566 NUDT12Q9BQG2 462 aa16.25■□□□□ 0.19
PCDHA3-202ENST00000532566 TUBB6Q9BUF5 446 aa16.25■□□□□ 0.19
PCDHA3-202ENST00000532566 ELP3Q9H9T3 547 aa16.25■□□□□ 0.19
PCDHA3-202ENST00000532566 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.25■□□□□ 0.19
PCDHA3-202ENST00000532566 FOXN3O00409 490 aaPredicted RBP16.25■□□□□ 0.19
PCDHA3-202ENST00000532566 PFDN6O15212 129 aa16.25■□□□□ 0.19
PCDHA3-202ENST00000532566 TOM1L1O75674 476 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms