RNA–Protein interactions for RNA: ENST00000532449.5

CHEK1-213, Transcript of checkpoint kinase 1, humanhuman

TSL 2 BASIC

Gene CHEK1, Length 4,051 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-213ENST00000532449 PHF2O75151 1096 aa11.5□□□□□ -0.57
CHEK1-213ENST00000532449 ETS1P14921 441 aa11.5□□□□□ -0.57
CHEK1-213ENST00000532449 CHKAP35790 457 aa11.5□□□□□ -0.57
CHEK1-213ENST00000532449 MFAP3P55082 362 aa11.5□□□□□ -0.57
CHEK1-213ENST00000532449 TFAMQ00059 246 aaKnown RBP11.5□□□□□ -0.57
CHEK1-213ENST00000532449 TRPC3Q13507 836 aa11.5□□□□□ -0.57
CHEK1-213ENST00000532449 GIT2Q14161 759 aa11.5□□□□□ -0.57
CHEK1-213ENST00000532449 SPARCL1Q14515 664 aa11.5□□□□□ -0.57
CHEK1-213ENST00000532449 SYDE2Q5VT97 1194 aa11.5□□□□□ -0.57
CHEK1-213ENST00000532449 SPOPLQ6IQ16 392 aa11.5□□□□□ -0.57
CHEK1-213ENST00000532449 RFX6Q8HWS3 928 aa11.5□□□□□ -0.57
CHEK1-213ENST00000532449 CBWD2Q8IUF1 395 aa11.5□□□□□ -0.57
CHEK1-213ENST00000532449 TEX2Q8IWB9 1127 aa11.5□□□□□ -0.57
CHEK1-213ENST00000532449 OGFOD1Q8N543 542 aa11.5□□□□□ -0.57
CHEK1-213ENST00000532449 RBM17Q96I25 401 aaKnown RBP11.5□□□□□ -0.57
CHEK1-213ENST00000532449 TEKT3Q9BXF9 490 aa11.5□□□□□ -0.57
CHEK1-213ENST00000532449 SCOCQ9UIL1 159 aa11.5□□□□□ -0.57
CHEK1-213ENST00000532449 SERPINB2P05120 415 aa11.5□□□□□ -0.57
CHEK1-213ENST00000532449 RARAP10276 462 aa11.5□□□□□ -0.57
CHEK1-213ENST00000532449 ALDH18A1P54886 795 aaKnown RBP11.5□□□□□ -0.57
CHEK1-213ENST00000532449 TMPRSS15P98073 1019 aa11.5□□□□□ -0.57
CHEK1-213ENST00000532449 RCN1Q15293 331 aa11.5□□□□□ -0.57
CHEK1-213ENST00000532449 ATP13A4Q4VNC1 1196 aa11.5□□□□□ -0.57
CHEK1-213ENST00000532449 RHPN2Q8IUC4 686 aa11.5□□□□□ -0.57
CHEK1-213ENST00000532449 ARHGEF19Q8IW93 802 aa11.5□□□□□ -0.57
CHEK1-213ENST00000532449 ZFPM1Q8IX07 1006 aa11.5□□□□□ -0.57
CHEK1-213ENST00000532449 EFCAB3Q8N7B9 438 aa11.5□□□□□ -0.57
CHEK1-213ENST00000532449 LNX1Q8TBB1 728 aaPredicted RBP11.5□□□□□ -0.57
CHEK1-213ENST00000532449 CALR3Q96L12 384 aaKnown RBP11.5□□□□□ -0.57
CHEK1-213ENST00000532449 ANLNQ9NQW6 1124 aa11.5□□□□□ -0.57
CHEK1-213ENST00000532449 PIH1D1Q9NWS0 290 aaKnown RBP11.5□□□□□ -0.57
CHEK1-213ENST00000532449 PODXLO00592 558 aa11.5□□□□□ -0.57
CHEK1-213ENST00000532449 GNAT1P11488 350 aa11.5□□□□□ -0.57
CHEK1-213ENST00000532449 BRDTQ58F21 947 aaPredicted RBP11.5□□□□□ -0.57
CHEK1-213ENST00000532449 RHOT2Q8IXI1 618 aa11.5□□□□□ -0.57
CHEK1-213ENST00000532449 SYT2Q8N9I0 419 aaPredicted RBP11.5□□□□□ -0.57
CHEK1-213ENST00000532449 HAS1Q92839 578 aa11.5□□□□□ -0.57
CHEK1-213ENST00000532449 SLC35C1Q96A29 364 aa11.5□□□□□ -0.57
CHEK1-213ENST00000532449 AGAP1Q9UPQ3 857 aa11.5□□□□□ -0.57
CHEK1-213ENST00000532449 MRPL42Q9Y6G3 142 aaKnown RBP11.5□□□□□ -0.57
CHEK1-213ENST00000532449 GRAP2O75791 330 aa11.5□□□□□ -0.57
CHEK1-213ENST00000532449 PRLRP16471 622 aa11.5□□□□□ -0.57
CHEK1-213ENST00000532449 MARK3P27448 753 aa11.5□□□□□ -0.57
CHEK1-213ENST00000532449 COILP38432 576 aaPredicted RBP11.5□□□□□ -0.57
CHEK1-213ENST00000532449 PPP6R3Q5H9R7 873 aaPredicted RBP11.5□□□□□ -0.57
CHEK1-213ENST00000532449 AGBL2Q5U5Z8 902 aa11.5□□□□□ -0.57
CHEK1-213ENST00000532449 LVRNQ6Q4G3 990 aa11.5□□□□□ -0.57
CHEK1-213ENST00000532449 LRIG3Q6UXM1 1119 aa11.5□□□□□ -0.57
CHEK1-213ENST00000532449 MTDHQ86UE4 582 aaKnown RBP11.5□□□□□ -0.57
CHEK1-213ENST00000532449 TTC8Q8TAM2 541 aa11.5□□□□□ -0.57
CHEK1-213ENST00000532449 YY1AP1Q9H869 796 aa11.5□□□□□ -0.57
CHEK1-213ENST00000532449 IFT122Q9HBG6 1241 aa11.5□□□□□ -0.57
CHEK1-213ENST00000532449 KMT5AQ9NQR1 393 aa11.5□□□□□ -0.57
CHEK1-213ENST00000532449 LMTK3Q96Q04 1460 aa11.49□□□□□ -0.57
CHEK1-213ENST00000532449 SHOX2O60902 331 aaPredicted RBP11.49□□□□□ -0.57
CHEK1-213ENST00000532449 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.49□□□□□ -0.57
CHEK1-213ENST00000532449 PREPLQ4J6C6 727 aaPredicted RBP11.49□□□□□ -0.57
CHEK1-213ENST00000532449 FIGNQ5HY92 759 aa11.49□□□□□ -0.57
CHEK1-213ENST00000532449 RGS9BPQ6ZS82 235 aa11.49□□□□□ -0.57
CHEK1-213ENST00000532449 CEP70Q8NHQ1 597 aa11.49□□□□□ -0.57
CHEK1-213ENST00000532449 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.49□□□□□ -0.57
CHEK1-213ENST00000532449 DNAJC19Q96DA6 116 aa11.49□□□□□ -0.57
CHEK1-213ENST00000532449 CHMP2BQ9UQN3 213 aa11.49□□□□□ -0.57
CHEK1-213ENST00000532449 DENND3A2RUS2 1198 aa11.49□□□□□ -0.57
CHEK1-213ENST00000532449 TLR3O15455 904 aaKnown RBP11.49□□□□□ -0.57
CHEK1-213ENST00000532449 AGTP01019 485 aa11.49□□□□□ -0.57
CHEK1-213ENST00000532449 ECE1P42892 770 aa11.49□□□□□ -0.57
CHEK1-213ENST00000532449 ANKRD20A2Q5SQ80 823 aa11.49□□□□□ -0.57
CHEK1-213ENST00000532449 ANKRD20A1Q5TYW2 823 aa11.49□□□□□ -0.57
CHEK1-213ENST00000532449 FRMD5Q7Z6J6 570 aa11.49□□□□□ -0.57
CHEK1-213ENST00000532449 SLC13A5Q86YT5 568 aaPredicted RBP11.49□□□□□ -0.57
CHEK1-213ENST00000532449 SULF1Q8IWU6 871 aa11.49□□□□□ -0.57
CHEK1-213ENST00000532449 XXYLT1Q8NBI6 393 aa11.49□□□□□ -0.57
CHEK1-213ENST00000532449 C15orf41Q9Y2V0 281 aa11.49□□□□□ -0.57
CHEK1-213ENST00000532449 RGPD8O14715 1765 aaPredicted RBP11.49□□□□□ -0.57
CHEK1-213ENST00000532449 FAM86B1E9PN63 330 aa11.49□□□□□ -0.57
CHEK1-213ENST00000532449 H3BRJ5 948 aa11.49□□□□□ -0.57
CHEK1-213ENST00000532449 MSH4O15457 936 aa11.49□□□□□ -0.57
CHEK1-213ENST00000532449 PFDN1O60925 122 aa11.49□□□□□ -0.57
CHEK1-213ENST00000532449 DNAJC6O75061 913 aa11.49□□□□□ -0.57
CHEK1-213ENST00000532449 HAUS5O94927 633 aa11.49□□□□□ -0.57
CHEK1-213ENST00000532449 FAM86B2P0C5J1 330 aa11.49□□□□□ -0.57
CHEK1-213ENST00000532449 ETS2P15036 469 aa11.49□□□□□ -0.57
CHEK1-213ENST00000532449 RFC5P40937 340 aa11.49□□□□□ -0.57
CHEK1-213ENST00000532449 IGBP1P78318 339 aa11.49□□□□□ -0.57
CHEK1-213ENST00000532449 TMED1Q13445 227 aa11.49□□□□□ -0.57
CHEK1-213ENST00000532449 C1orf146Q5VVC0 180 aa11.49□□□□□ -0.57
CHEK1-213ENST00000532449 USP37Q86T82 979 aa11.49□□□□□ -0.57
CHEK1-213ENST00000532449 SNRNP27Q8WVK2 155 aaKnown RBP11.49□□□□□ -0.57
CHEK1-213ENST00000532449 NACC1Q96RE7 527 aa11.49□□□□□ -0.57
CHEK1-213ENST00000532449 THTPAQ9BU02 230 aa11.49□□□□□ -0.57
CHEK1-213ENST00000532449 STK33Q9BYT3 514 aa11.49□□□□□ -0.57
CHEK1-213ENST00000532449 SUCLA2Q9P2R7 463 aaPredicted RBP11.49□□□□□ -0.57
CHEK1-213ENST00000532449 PCDHGC5Q9Y5F6 944 aa11.49□□□□□ -0.57
CHEK1-213ENST00000532449 IPO5O00410 1097 aaKnown RBP11.48□□□□□ -0.57
CHEK1-213ENST00000532449 KRT4P19013 534 aa11.48□□□□□ -0.57
CHEK1-213ENST00000532449 RRM1P23921 792 aa11.48□□□□□ -0.57
CHEK1-213ENST00000532449 PDIA5Q14554 519 aa11.48□□□□□ -0.57
CHEK1-213ENST00000532449 TEKT4Q8WW24 435 aa11.48□□□□□ -0.57
CHEK1-213ENST00000532449 RMDN2Q96LZ7 410 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms