RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 REM2Q8IYK8 340 aaPredicted RBP12.01□□□□□ -0.49
PTPRK-221ENST00000532331 BAG5Q9UL15 447 aa12.01□□□□□ -0.49
PTPRK-221ENST00000532331 DIS3Q9Y2L1 958 aaKnown RBP12.01□□□□□ -0.49
PTPRK-221ENST00000532331 AK9Q5TCS8 1911 aa12.01□□□□□ -0.49
PTPRK-221ENST00000532331 SLC26A2P50443 739 aa12.01□□□□□ -0.49
PTPRK-221ENST00000532331 DR1Q01658 176 aa12.01□□□□□ -0.49
PTPRK-221ENST00000532331 APOBEC3HQ6NTF7 200 aaKnown RBP12.01□□□□□ -0.49
PTPRK-221ENST00000532331 N4BP2L2Q92802 583 aaPredicted RBP12.01□□□□□ -0.49
PTPRK-221ENST00000532331 C11orf70Q9BRQ4 267 aa12.01□□□□□ -0.49
PTPRK-221ENST00000532331 CYP26B1Q9NR63 512 aa12.01□□□□□ -0.49
PTPRK-221ENST00000532331 USH1CQ9Y6N9 552 aa12.01□□□□□ -0.49
PTPRK-221ENST00000532331 IGSF9BQ9UPX0 1349 aa12.01□□□□□ -0.49
PTPRK-221ENST00000532331 ZMYND10O75800 440 aa12.01□□□□□ -0.49
PTPRK-221ENST00000532331 PTPRAP18433 802 aa12.01□□□□□ -0.49
PTPRK-221ENST00000532331 TMED2Q15363 201 aa12.01□□□□□ -0.49
PTPRK-221ENST00000532331 STILQ15468 1287 aa12.01□□□□□ -0.49
PTPRK-221ENST00000532331 UBR1Q8IWV7 1749 aa12.01□□□□□ -0.49
PTPRK-221ENST00000532331 ASIC4Q96FT7 647 aa12.01□□□□□ -0.49
PTPRK-221ENST00000532331 PDXKO00764 312 aa12.01□□□□□ -0.49
PTPRK-221ENST00000532331 URODP06132 367 aa12.01□□□□□ -0.49
PTPRK-221ENST00000532331 SCP2P22307 547 aa12.01□□□□□ -0.49
PTPRK-221ENST00000532331 TLK2Q86UE8 772 aa12.01□□□□□ -0.49
PTPRK-221ENST00000532331 SENP6Q9GZR1 1112 aaPredicted RBP12.01□□□□□ -0.49
PTPRK-221ENST00000532331 DPP7Q9UHL4 492 aa12.01□□□□□ -0.49
PTPRK-221ENST00000532331 ARHGEF28Q8N1W1 1705 aaKnown RBP12.01□□□□□ -0.49
PTPRK-221ENST00000532331 MT-ND3P03897 115 aa12.01□□□□□ -0.49
PTPRK-221ENST00000532331 HOXC6P09630 235 aa12.01□□□□□ -0.49
PTPRK-221ENST00000532331 TRIM49P0CI25 452 aa12.01□□□□□ -0.49
PTPRK-221ENST00000532331 TRIM49CP0CI26 452 aa12.01□□□□□ -0.49
PTPRK-221ENST00000532331 TFDP2Q14188 446 aa12.01□□□□□ -0.49
PTPRK-221ENST00000532331 NLGN2Q8NFZ4 835 aa12.01□□□□□ -0.49
PTPRK-221ENST00000532331 TRPM4Q8TD43 1214 aa12.01□□□□□ -0.49
PTPRK-221ENST00000532331 CALR3Q96L12 384 aaKnown RBP12.01□□□□□ -0.49
PTPRK-221ENST00000532331 REEP2Q9BRK0 252 aa12.01□□□□□ -0.49
PTPRK-221ENST00000532331 ABCF3Q9NUQ8 709 aa12.01□□□□□ -0.49
PTPRK-221ENST00000532331 KLHL8Q9P2G9 620 aaPredicted RBP12.01□□□□□ -0.49
PTPRK-221ENST00000532331 PHLPP1O60346 1717 aa12.01□□□□□ -0.49
PTPRK-221ENST00000532331 CLGNO14967 610 aa12□□□□□ -0.49
PTPRK-221ENST00000532331 IFNAR2P48551 515 aa12□□□□□ -0.49
PTPRK-221ENST00000532331 SARM1Q6SZW1 724 aa12□□□□□ -0.49
PTPRK-221ENST00000532331 KCTD17Q8N5Z5 321 aa12□□□□□ -0.49
PTPRK-221ENST00000532331 FSD1LQ9BXM9 530 aa12□□□□□ -0.49
PTPRK-221ENST00000532331 TRPV6Q9H1D0 765 aa12□□□□□ -0.49
PTPRK-221ENST00000532331 UNC45AQ9H3U1 944 aa12□□□□□ -0.49
PTPRK-221ENST00000532331 ANAPC7Q9UJX3 599 aa12□□□□□ -0.49
PTPRK-221ENST00000532331 GTF3C5Q9Y5Q8 519 aaPredicted RBP12□□□□□ -0.49
PTPRK-221ENST00000532331 CAMTA1Q9Y6Y1 1673 aa12□□□□□ -0.49
PTPRK-221ENST00000532331 AMHP03971 560 aa12□□□□□ -0.49
PTPRK-221ENST00000532331 SHMT1P34896 483 aa12□□□□□ -0.49
PTPRK-221ENST00000532331 STX1BP61266 288 aa12□□□□□ -0.49
PTPRK-221ENST00000532331 SEMA3FQ13275 785 aa12□□□□□ -0.49
PTPRK-221ENST00000532331 FAM102AQ5T9C2 384 aaPredicted RBP12□□□□□ -0.49
PTPRK-221ENST00000532331 KSR1Q8IVT5 923 aa12□□□□□ -0.49
PTPRK-221ENST00000532331 DCLK2Q8N568 766 aa12□□□□□ -0.49
PTPRK-221ENST00000532331 TJP3O95049 919 aa12□□□□□ -0.49
PTPRK-221ENST00000532331 ANTXR2P58335 489 aa12□□□□□ -0.49
PTPRK-221ENST00000532331 TRIP13Q15645 432 aaPredicted RBP12□□□□□ -0.49
PTPRK-221ENST00000532331 SGSM1Q2NKQ1 1148 aa12□□□□□ -0.49
PTPRK-221ENST00000532331 CYP4A22Q5TCH4 519 aa12□□□□□ -0.49
PTPRK-221ENST00000532331 METTL7BQ6UX53 244 aa12□□□□□ -0.49
PTPRK-221ENST00000532331 TRIM72Q6ZMU5 477 aa12□□□□□ -0.49
PTPRK-221ENST00000532331 NUDCD1Q96RS6 583 aa12□□□□□ -0.49
PTPRK-221ENST00000532331 CCSER1Q9C0I3 900 aa12□□□□□ -0.49
PTPRK-221ENST00000532331 VCX3AQ9NNX9 186 aa12□□□□□ -0.49
PTPRK-221ENST00000532331 CAPN7Q9Y6W3 813 aa12□□□□□ -0.49
PTPRK-221ENST00000532331 NFIBO00712 420 aa12□□□□□ -0.49
PTPRK-221ENST00000532331 PDGFRBP09619 1106 aa12□□□□□ -0.49
PTPRK-221ENST00000532331 PNPLA4P41247 253 aa12□□□□□ -0.49
PTPRK-221ENST00000532331 PCNX4Q63HM2 1172 aa12□□□□□ -0.49
PTPRK-221ENST00000532331 CFAP61Q8NHU2 1237 aa12□□□□□ -0.49
PTPRK-221ENST00000532331 WHAMMQ8TF30 809 aa12□□□□□ -0.49
PTPRK-221ENST00000532331 H3BRB1 525 aa11.99□□□□□ -0.49
PTPRK-221ENST00000532331 CLTAP09496 248 aa11.99□□□□□ -0.49
PTPRK-221ENST00000532331 ODC1P11926 461 aa11.99□□□□□ -0.49
PTPRK-221ENST00000532331 CLNS1AP54105 237 aaKnown RBP11.99□□□□□ -0.49
PTPRK-221ENST00000532331 NPEPPSP55786 919 aa11.99□□□□□ -0.49
PTPRK-221ENST00000532331 ACVR2BQ13705 512 aa11.99□□□□□ -0.49
PTPRK-221ENST00000532331 FMR1NBQ8N0W7 255 aaPredicted RBP11.99□□□□□ -0.49
PTPRK-221ENST00000532331 TTC30BQ8N4P2 665 aa11.99□□□□□ -0.49
PTPRK-221ENST00000532331 UPF1Q92900 1129 aaKnown RBP eCLIP11.99□□□□□ -0.49
PTPRK-221ENST00000532331 CHMP6Q96FZ7 201 aa11.99□□□□□ -0.49
PTPRK-221ENST00000532331 BPIFA3Q9BQP9 254 aa11.99□□□□□ -0.49
PTPRK-221ENST00000532331 TUT1Q9H6E5 874 aaKnown RBP11.99□□□□□ -0.49
PTPRK-221ENST00000532331 MIF4GDA9UHW6 222 aaKnown RBP11.99□□□□□ -0.49
PTPRK-221ENST00000532331 ZC3H11AO75152 810 aaKnown RBP eCLIP11.99□□□□□ -0.49
PTPRK-221ENST00000532331 ZNF286BP0CG31 522 aa11.99□□□□□ -0.49
PTPRK-221ENST00000532331 PDIK1LQ8N165 341 aa11.99□□□□□ -0.49
PTPRK-221ENST00000532331 KAZALD1Q96I82 304 aa11.99□□□□□ -0.49
PTPRK-221ENST00000532331 IRF1P10914 325 aa11.99□□□□□ -0.49
PTPRK-221ENST00000532331 KLRC1P26715 233 aa11.99□□□□□ -0.49
PTPRK-221ENST00000532331 KIZQ2M2Z5 673 aa11.99□□□□□ -0.49
PTPRK-221ENST00000532331 MUM1Q2TAK8 710 aa11.99□□□□□ -0.49
PTPRK-221ENST00000532331 BBS9Q3SYG4 887 aa11.99□□□□□ -0.49
PTPRK-221ENST00000532331 CCDC197Q8NCU1 140 aa11.99□□□□□ -0.49
PTPRK-221ENST00000532331 RBM41Q96IZ5 413 aaKnown RBP11.99□□□□□ -0.49
PTPRK-221ENST00000532331 AP1M1Q9BXS5 423 aa11.99□□□□□ -0.49
PTPRK-221ENST00000532331 GOLPH3LQ9H4A5 285 aa11.99□□□□□ -0.49
PTPRK-221ENST00000532331 CCDC188H7C350 402 aa11.99□□□□□ -0.49
PTPRK-221ENST00000532331 TGFB3P10600 412 aa11.99□□□□□ -0.49
PTPRK-221ENST00000532331 PAMP19021 973 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms