RNA–Protein interactions for RNA: ENST00000531558.1

PICALM-215, Transcript of phosphatidylinositol binding clathrin assembly protein, humanhuman

TSL 5

Gene PICALM, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PICALM-215ENST00000531558 GRIK3Q13003 919 aa28.26■■■□□ 2.11
PICALM-215ENST00000531558 ZC2HC1CQ53FD0 456 aaPredicted RBP28.26■■■□□ 2.11
PICALM-215ENST00000531558 TMEM173Q86WV6 379 aaPredicted RBP28.26■■■□□ 2.11
PICALM-215ENST00000531558 CEP57L1Q8IYX8 460 aa28.26■■■□□ 2.11
PICALM-215ENST00000531558 MRPS27Q92552 414 aaKnown RBP28.26■■■□□ 2.11
PICALM-215ENST00000531558 HVCN1Q96D96 273 aa28.26■■■□□ 2.11
PICALM-215ENST00000531558 C7orf25Q9BPX7 421 aa28.26■■■□□ 2.11
PICALM-215ENST00000531558 NSUN3Q9H649 340 aaKnown RBP28.26■■■□□ 2.11
PICALM-215ENST00000531558 TBC1D7Q9P0N9 293 aa28.26■■■□□ 2.11
PICALM-215ENST00000531558 ACTN4O43707 911 aaKnown RBP28.25■■■□□ 2.11
PICALM-215ENST00000531558 SLFN14P0C7P3 912 aa28.25■■■□□ 2.11
PICALM-215ENST00000531558 ASIC1P78348 528 aa28.25■■■□□ 2.11
PICALM-215ENST00000531558 KRT17Q04695 432 aa28.25■■■□□ 2.11
PICALM-215ENST00000531558 COASYQ13057 564 aa28.25■■■□□ 2.11
PICALM-215ENST00000531558 COLGALT2Q8IYK4 626 aa28.25■■■□□ 2.11
PICALM-215ENST00000531558 TMEM169Q96HH4 297 aa28.25■■■□□ 2.11
PICALM-215ENST00000531558 CCDC94Q9BW85 323 aaPredicted RBP28.25■■■□□ 2.11
PICALM-215ENST00000531558 STRA6Q9BX79 667 aa28.25■■■□□ 2.11
PICALM-215ENST00000531558 TLR9Q9NR96 1032 aa28.25■■■□□ 2.11
PICALM-215ENST00000531558 SERTAD1Q9UHV2 236 aa28.25■■■□□ 2.11
PICALM-215ENST00000531558 PLXNA4Q9HCM2 1894 aa28.24■■■□□ 2.11
PICALM-215ENST00000531558 CLDN3O15551 220 aa28.24■■■□□ 2.11
PICALM-215ENST00000531558 IRS1P35568 1242 aa28.24■■■□□ 2.11
PICALM-215ENST00000531558 FSIP1Q8NA03 581 aa28.24■■■□□ 2.11
PICALM-215ENST00000531558 BCL7CQ8WUZ0 217 aaPredicted RBP28.24■■■□□ 2.11
PICALM-215ENST00000531558 IGSF21Q96ID5 467 aa28.24■■■□□ 2.11
PICALM-215ENST00000531558 HAPLN2Q9GZV7 340 aa28.24■■■□□ 2.11
PICALM-215ENST00000531558 USP25Q9UHP3 1055 aa28.24■■■□□ 2.11
PICALM-215ENST00000531558 PUF60Q9UHX1 559 aaKnown RBP28.24■■■□□ 2.11
PICALM-215ENST00000531558 MYO7AQ13402 2215 aa28.24■■■□□ 2.11
PICALM-215ENST00000531558 PTGESO14684 152 aa28.23■■■□□ 2.11
PICALM-215ENST00000531558 GCNT3O95395 438 aa28.23■■■□□ 2.11
PICALM-215ENST00000531558 NDUFA8P51970 172 aa28.23■■■□□ 2.11
PICALM-215ENST00000531558 OSTNP61366 133 aa28.23■■■□□ 2.11
PICALM-215ENST00000531558 SKIV2LQ15477 1246 aaKnown RBP28.23■■■□□ 2.11
PICALM-215ENST00000531558 TCEAL5Q5H9L2 206 aa28.23■■■□□ 2.11
PICALM-215ENST00000531558 CXCL16Q9H2A7 254 aa28.23■■■□□ 2.11
PICALM-215ENST00000531558 TOPORSQ9NS56 1045 aaPredicted RBP28.23■■■□□ 2.11
PICALM-215ENST00000531558 ALDH2P05091 517 aa28.22■■■□□ 2.11
PICALM-215ENST00000531558 MATR3P43243 847 aaKnown RBP eCLIP28.22■■■□□ 2.113e-7■■■■□ 21
PICALM-215ENST00000531558 SYKP43405 635 aa28.22■■■□□ 2.11
PICALM-215ENST00000531558 AFMP43652 599 aa28.22■■■□□ 2.11
PICALM-215ENST00000531558 CASP5P51878 434 aa28.22■■■□□ 2.11
PICALM-215ENST00000531558 YARSP54577 528 aaKnown RBP28.22■■■□□ 2.11
PICALM-215ENST00000531558 ERVFC1P60507 584 aa28.22■■■□□ 2.11
PICALM-215ENST00000531558 ALCAMQ13740 583 aa28.22■■■□□ 2.11
PICALM-215ENST00000531558 TPRNQ4KMQ1 711 aa28.22■■■□□ 2.11
PICALM-215ENST00000531558 SLC39A4Q6P5W5 647 aa28.22■■■□□ 2.11
PICALM-215ENST00000531558 ACAP3Q96P50 834 aa28.22■■■□□ 2.11
PICALM-215ENST00000531558 FGFBP2Q9BYJ0 223 aa28.22■■■□□ 2.11
PICALM-215ENST00000531558 BLZF1Q9H2G9 400 aa28.22■■■□□ 2.11
PICALM-215ENST00000531558 GOLPH3LQ9H4A5 285 aa28.22■■■□□ 2.11
PICALM-215ENST00000531558 PRDM6Q9NQX0 595 aa28.22■■■□□ 2.11
PICALM-215ENST00000531558 FAN1Q9Y2M0 1017 aa28.22■■■□□ 2.11
PICALM-215ENST00000531558 NRP1O14786 923 aa28.21■■■□□ 2.11
PICALM-215ENST00000531558 FSCN2O14926 492 aa28.21■■■□□ 2.11
PICALM-215ENST00000531558 MYBP10242 640 aa28.21■■■□□ 2.11
PICALM-215ENST00000531558 CASP1P29466 404 aa28.21■■■□□ 2.11
PICALM-215ENST00000531558 OR1G1P47890 313 aa28.21■■■□□ 2.11
PICALM-215ENST00000531558 L1TD1Q5T7N2 865 aaKnown RBP28.21■■■□□ 2.11
PICALM-215ENST00000531558 UNC13DQ70J99 1090 aa28.21■■■□□ 2.11
PICALM-215ENST00000531558 GRAMD1CQ8IYS0 662 aa28.21■■■□□ 2.11
PICALM-215ENST00000531558 PAGE5Q96GU1 130 aa28.21■■■□□ 2.11
PICALM-215ENST00000531558 PRG3Q9Y2Y8 225 aaPredicted RBP28.21■■■□□ 2.11
PICALM-215ENST00000531558 PCDHB13Q9Y5F0 798 aa28.21■■■□□ 2.11
PICALM-215ENST00000531558 PCDHGC5Q9Y5F6 944 aa28.21■■■□□ 2.11
PICALM-215ENST00000531558 ATG2AQ2TAZ0 1938 aa28.2■■■□□ 2.11
PICALM-215ENST00000531558 NR1I2O75469 434 aa28.2■■■□□ 2.1
PICALM-215ENST00000531558 THP07101 528 aa28.2■■■□□ 2.1
PICALM-215ENST00000531558 TUSC3Q13454 348 aa28.2■■■□□ 2.1
PICALM-215ENST00000531558 CUL4BQ13620 913 aa28.2■■■□□ 2.1
PICALM-215ENST00000531558 PDE12Q6L8Q7 609 aaKnown RBP28.2■■■□□ 2.1
PICALM-215ENST00000531558 MICAL1Q8TDZ2 1067 aa28.2■■■□□ 2.1
PICALM-215ENST00000531558 SNX27Q96L92 541 aa28.2■■■□□ 2.1
PICALM-215ENST00000531558 TCF25Q9BQ70 676 aa28.2■■■□□ 2.1
PICALM-215ENST00000531558 MARCH5Q9NX47 278 aa28.2■■■□□ 2.1
PICALM-215ENST00000531558 UNC80Q8N2C7 3258 aa28.19■■■□□ 2.1
PICALM-215ENST00000531558 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP28.19■■■□□ 2.1
PICALM-215ENST00000531558 A0A0B4J269 797 aa28.19■■■□□ 2.1
PICALM-215ENST00000531558 KCNA1Q09470 495 aa28.19■■■□□ 2.1
PICALM-215ENST00000531558 NAB2Q15742 525 aa28.19■■■□□ 2.1
PICALM-215ENST00000531558 SEZ6Q53EL9 994 aa28.19■■■□□ 2.1
PICALM-215ENST00000531558 XKR4Q5GH76 650 aa28.19■■■□□ 2.1
PICALM-215ENST00000531558 GLRA4Q5JXX5 417 aa28.19■■■□□ 2.1
PICALM-215ENST00000531558 ALKAL1Q6UXT8 129 aa28.19■■■□□ 2.1
PICALM-215ENST00000531558 DDX53Q86TM3 631 aaKnown RBP28.19■■■□□ 2.1
PICALM-215ENST00000531558 HPS3Q969F9 1004 aa28.19■■■□□ 2.1
PICALM-215ENST00000531558 PPP2R3CQ969Q6 453 aa28.19■■■□□ 2.1
PICALM-215ENST00000531558 ACCSQ96QU6 501 aa28.19■■■□□ 2.1
PICALM-215ENST00000531558 ENTPD7Q9NQZ7 604 aa28.19■■■□□ 2.1
PICALM-215ENST00000531558 CHMP5Q9NZZ3 219 aa28.19■■■□□ 2.1
PICALM-215ENST00000531558 EXOC7Q9UPT5 735 aa28.19■■■□□ 2.1
PICALM-215ENST00000531558 SPTBN5Q9NRC6 3674 aaKnown RBP28.19■■■□□ 2.1
PICALM-215ENST00000531558 TISP43B9A030 160 aa28.18■■■□□ 2.1
PICALM-215ENST00000531558 ANKRD63C9JTQ0 380 aa28.18■■■□□ 2.1
PICALM-215ENST00000531558 PPP1R10Q96QC0 940 aaKnown RBP28.18■■■□□ 2.1
PICALM-215ENST00000531558 MSTO1Q9BUK6 570 aa28.18■■■□□ 2.1
PICALM-215ENST00000531558 VN1R3Q9BXE9 311 aa28.18■■■□□ 2.1
PICALM-215ENST00000531558 IKZF4Q9H2S9 585 aa28.18■■■□□ 2.1
PICALM-215ENST00000531558 NGRNQ9NPE2 291 aaKnown RBP28.18■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms