RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 LSP1P33241 339 aa5.62□□□□□ -1.51
USP47-211ENST00000531513 SCAND1P57086 179 aa5.62□□□□□ -1.51
USP47-211ENST00000531513 PHC1P78364 1004 aa5.62□□□□□ -1.51
USP47-211ENST00000531513 LRRC32Q14392 662 aa5.62□□□□□ -1.51
USP47-211ENST00000531513 MFSD5Q6N075 450 aa5.62□□□□□ -1.51
USP47-211ENST00000531513 EPM2AIP1Q7L775 607 aaPredicted RBP5.62□□□□□ -1.51
USP47-211ENST00000531513 CMTR2Q8IYT2 770 aaKnown RBP5.62□□□□□ -1.51
USP47-211ENST00000531513 SYNE4Q8N205 404 aa5.62□□□□□ -1.51
USP47-211ENST00000531513 MDGA1Q8NFP4 955 aa5.62□□□□□ -1.51
USP47-211ENST00000531513 ARL8AQ96BM9 186 aa5.62□□□□□ -1.51
USP47-211ENST00000531513 HSPBAP1Q96EW2 488 aa5.62□□□□□ -1.51
USP47-211ENST00000531513 AIFM3Q96NN9 605 aa5.62□□□□□ -1.51
USP47-211ENST00000531513 NUP88Q99567 741 aaPredicted RBP5.62□□□□□ -1.51
USP47-211ENST00000531513 SARGQ9BW04 601 aa5.62□□□□□ -1.51
USP47-211ENST00000531513 HAPLN2Q9GZV7 340 aa5.62□□□□□ -1.51
USP47-211ENST00000531513 PCIF1Q9H4Z3 704 aa5.62□□□□□ -1.51
USP47-211ENST00000531513 TOPORSQ9NS56 1045 aaPredicted RBP5.62□□□□□ -1.51
USP47-211ENST00000531513 PCDHGA9Q9Y5G4 932 aaKnown RBP5.62□□□□□ -1.51
USP47-211ENST00000531513 PCDHGA8Q9Y5G5 932 aa5.62□□□□□ -1.51
USP47-211ENST00000531513 PCDHGA7Q9Y5G6 932 aa5.62□□□□□ -1.51
USP47-211ENST00000531513 PCDHGA6Q9Y5G7 932 aa5.62□□□□□ -1.51
USP47-211ENST00000531513 PCDHGA3Q9Y5H0 932 aa5.62□□□□□ -1.51
USP47-211ENST00000531513 PCDHGA2Q9Y5H1 932 aa5.62□□□□□ -1.51
USP47-211ENST00000531513 KLHL33A6NCF5 533 aa5.61□□□□□ -1.51
USP47-211ENST00000531513 GOLGA8AA7E2F4 631 aa5.61□□□□□ -1.51
USP47-211ENST00000531513 GOLGA6L6A8MZA4 724 aa5.61□□□□□ -1.51
USP47-211ENST00000531513 ERC2O15083 957 aa5.61□□□□□ -1.51
USP47-211ENST00000531513 IPO13O94829 963 aaKnown RBP5.61□□□□□ -1.51
USP47-211ENST00000531513 LMNAP02545 664 aaKnown RBP5.61□□□□□ -1.51
USP47-211ENST00000531513 JUNP05412 331 aaKnown RBP5.61□□□□□ -1.51
USP47-211ENST00000531513 HNRNPLP14866 589 aaKnown RBP eCLIP5.61□□□□□ -1.51
USP47-211ENST00000531513 SLC9A1P19634 815 aa5.61□□□□□ -1.51
USP47-211ENST00000531513 FBLP22087 321 aaKnown RBP5.61□□□□□ -1.51
USP47-211ENST00000531513 GBX1Q14549 363 aa5.61□□□□□ -1.51
USP47-211ENST00000531513 ZNF174Q15697 407 aa5.61□□□□□ -1.51
USP47-211ENST00000531513 TTC38Q5R3I4 469 aa5.61□□□□□ -1.51
USP47-211ENST00000531513 GPR158Q5T848 1215 aa5.61□□□□□ -1.51
USP47-211ENST00000531513 PRAMEF9Q5VWM5 478 aa5.61□□□□□ -1.51
USP47-211ENST00000531513 ESRP1Q6NXG1 681 aaKnown RBP5.61□□□□□ -1.51
USP47-211ENST00000531513 BMP8AQ7Z5Y6 402 aa5.61□□□□□ -1.51
USP47-211ENST00000531513 NME9Q86XW9 330 aa5.61□□□□□ -1.51
USP47-211ENST00000531513 ZNF610Q8N9Z0 462 aa5.61□□□□□ -1.51
USP47-211ENST00000531513 PROKR1Q8TCW9 393 aa5.61□□□□□ -1.51
USP47-211ENST00000531513 TIFAQ96CG3 184 aa5.61□□□□□ -1.51
USP47-211ENST00000531513 IL17RAQ96F46 866 aa5.61□□□□□ -1.51
USP47-211ENST00000531513 ZNF512Q96ME7 567 aaPredicted RBP5.61□□□□□ -1.51
USP47-211ENST00000531513 ELF4Q99607 663 aaPredicted RBP5.61□□□□□ -1.51
USP47-211ENST00000531513 ANLNQ9NQW6 1124 aa5.61□□□□□ -1.51
USP47-211ENST00000531513 NCDNQ9UBB6 729 aa5.61□□□□□ -1.51
USP47-211ENST00000531513 NOC2LQ9Y3T9 749 aaKnown RBP5.61□□□□□ -1.51
USP47-211ENST00000531513 GRID2IPA4D2P6 1211 aa5.6□□□□□ -1.51
USP47-211ENST00000531513 MFAP3LO75121 409 aa5.6□□□□□ -1.51
USP47-211ENST00000531513 IL33O95760 270 aa5.6□□□□□ -1.51
USP47-211ENST00000531513 NUDT3O95989 172 aa5.6□□□□□ -1.51
USP47-211ENST00000531513 IL12RB1P42701 662 aa5.6□□□□□ -1.51
USP47-211ENST00000531513 GPR3P46089 330 aa5.6□□□□□ -1.51
USP47-211ENST00000531513 MYBPC3Q14896 1274 aa5.6□□□□□ -1.51
USP47-211ENST00000531513 ARHGAP29Q52LW3 1261 aa5.6□□□□□ -1.51
USP47-211ENST00000531513 EFCAB2Q5VUJ9 269 aa5.6□□□□□ -1.51
USP47-211ENST00000531513 NAIF1Q69YI7 327 aaPredicted RBP5.6□□□□□ -1.51
USP47-211ENST00000531513 LRRC55Q6ZSA7 311 aa5.6□□□□□ -1.51
USP47-211ENST00000531513 KANSL1Q7Z3B3 1105 aa5.6□□□□□ -1.51
USP47-211ENST00000531513 CMIPQ8IY22 773 aa5.6□□□□□ -1.51
USP47-211ENST00000531513 AMOTL1Q8IY63 956 aa5.6□□□□□ -1.51
USP47-211ENST00000531513 PJA1Q8NG27 643 aa5.6□□□□□ -1.51
USP47-211ENST00000531513 LMBR1Q8WVP7 490 aa5.6□□□□□ -1.51
USP47-211ENST00000531513 ARPC5LQ9BPX5 153 aa5.6□□□□□ -1.51
USP47-211ENST00000531513 C14orf93Q9H972 538 aaKnown RBP5.6□□□□□ -1.51
USP47-211ENST00000531513 TOMM22Q9NS69 142 aa5.6□□□□□ -1.51
USP47-211ENST00000531513 USP25Q9UHP3 1055 aa5.6□□□□□ -1.51
USP47-211ENST00000531513 IFRD1O00458 451 aaPredicted RBP5.59□□□□□ -1.51
USP47-211ENST00000531513 XPOTO43592 962 aaKnown RBP5.59□□□□□ -1.51
USP47-211ENST00000531513 STC2O76061 302 aa5.59□□□□□ -1.51
USP47-211ENST00000531513 RHOBTB3O94955 611 aa5.59□□□□□ -1.51
USP47-211ENST00000531513 ABHD16AO95870 558 aa5.59□□□□□ -1.51
USP47-211ENST00000531513 ITGB1P05556 798 aa5.59□□□□□ -1.51
USP47-211ENST00000531513 NBPF7P0C2Y1 421 aaPredicted RBP5.59□□□□□ -1.51
USP47-211ENST00000531513 MORC3Q14149 939 aa5.59□□□□□ -1.51
USP47-211ENST00000531513 SPIDRQ14159 915 aa5.59□□□□□ -1.51
USP47-211ENST00000531513 GRM3Q14832 879 aa5.59□□□□□ -1.51
USP47-211ENST00000531513 LY6G5CQ5SRR4 150 aa5.59□□□□□ -1.51
USP47-211ENST00000531513 KCNV1Q6PIU1 500 aa5.59□□□□□ -1.51
USP47-211ENST00000531513 CMTM4Q8IZR5 234 aa5.59□□□□□ -1.51
USP47-211ENST00000531513 LRGUKQ96M69 825 aa5.59□□□□□ -1.51
USP47-211ENST00000531513 TUBGCP5Q96RT8 1024 aa5.59□□□□□ -1.51
USP47-211ENST00000531513 FZD1Q9UP38 647 aa5.59□□□□□ -1.51
USP47-211ENST00000531513 HS3ST4Q9Y661 456 aa5.59□□□□□ -1.51
USP47-211ENST00000531513 ANO9A1A5B4 782 aa5.58□□□□□ -1.52
USP47-211ENST00000531513 IFIT2P09913 472 aaKnown RBP5.58□□□□□ -1.52
USP47-211ENST00000531513 PHKG2P15735 406 aa5.58□□□□□ -1.52
USP47-211ENST00000531513 HSPA6P17066 643 aa5.58□□□□□ -1.52
USP47-211ENST00000531513 GNAT2P19087 354 aa5.58□□□□□ -1.52
USP47-211ENST00000531513 AKAP5P24588 427 aa5.58□□□□□ -1.52
USP47-211ENST00000531513 ZFP36P26651 326 aaKnown RBP5.58□□□□□ -1.52
USP47-211ENST00000531513 NPEPPSP55786 919 aa5.58□□□□□ -1.52
USP47-211ENST00000531513 BCAR1P56945 870 aa5.58□□□□□ -1.52
USP47-211ENST00000531513 ADCY1Q08828 1119 aa5.58□□□□□ -1.52
USP47-211ENST00000531513 PICALMQ13492 652 aa5.58□□□□□ -1.52
USP47-211ENST00000531513 PTPAQ15257 358 aa5.58□□□□□ -1.52
USP47-211ENST00000531513 CLUL1Q15846 466 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms