RNA–Protein interactions for RNA: ENST00000531068.5

CAPN1-221, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-221ENST00000531068 PNMA5Q96PV4 448 aa12.07□□□□□ -0.48
CAPN1-221ENST00000531068 PLIN2Q99541 437 aa12.07□□□□□ -0.48
CAPN1-221ENST00000531068 KIFC3Q9BVG8 833 aa12.07□□□□□ -0.48
CAPN1-221ENST00000531068 RUSC1Q9BVN2 902 aa12.07□□□□□ -0.48
CAPN1-221ENST00000531068 MRPL4Q9BYD3 311 aaKnown RBP12.07□□□□□ -0.48
CAPN1-221ENST00000531068 CD320Q9NPF0 282 aa12.07□□□□□ -0.48
CAPN1-221ENST00000531068 DZANK1Q9NVP4 752 aa12.07□□□□□ -0.48
CAPN1-221ENST00000531068 KLK14Q9P0G3 267 aa12.07□□□□□ -0.48
CAPN1-221ENST00000531068 LARSQ9P2J5 1176 aaKnown RBP12.07□□□□□ -0.48
CAPN1-221ENST00000531068 CFAP45Q9UL16 551 aa12.07□□□□□ -0.48
CAPN1-221ENST00000531068 PRG3Q9Y2Y8 225 aaPredicted RBP12.07□□□□□ -0.48
CAPN1-221ENST00000531068 USP15Q9Y4E8 981 aaPredicted RBP12.07□□□□□ -0.48
CAPN1-221ENST00000531068 HCFC2Q9Y5Z7 792 aa12.07□□□□□ -0.48
CAPN1-221ENST00000531068 SPTBN5Q9NRC6 3674 aaKnown RBP12.06□□□□□ -0.48
CAPN1-221ENST00000531068 B4GALT3O60512 393 aa12.06□□□□□ -0.48
CAPN1-221ENST00000531068 TADA2AO75478 443 aa12.06□□□□□ -0.48
CAPN1-221ENST00000531068 URODP06132 367 aa12.06□□□□□ -0.48
CAPN1-221ENST00000531068 THP07101 528 aa12.06□□□□□ -0.48
CAPN1-221ENST00000531068 PLS3P13797 630 aa12.06□□□□□ -0.48
CAPN1-221ENST00000531068 SCP2P22307 547 aa12.06□□□□□ -0.48
CAPN1-221ENST00000531068 YARSP54577 528 aaKnown RBP12.06□□□□□ -0.48
CAPN1-221ENST00000531068 SLC12A3P55017 1021 aa12.06□□□□□ -0.48
CAPN1-221ENST00000531068 STRN3Q13033 797 aa12.06□□□□□ -0.48
CAPN1-221ENST00000531068 AXDND1Q5T1B0 1012 aaPredicted RBP12.06□□□□□ -0.48
CAPN1-221ENST00000531068 NT5DC1Q5TFE4 455 aa12.06□□□□□ -0.48
CAPN1-221ENST00000531068 ELMSAN1Q6PJG2 1045 aa12.06□□□□□ -0.48
CAPN1-221ENST00000531068 GPR65Q8IYL9 337 aa12.06□□□□□ -0.48
CAPN1-221ENST00000531068 GSTCDQ8NEC7 633 aa12.06□□□□□ -0.48
CAPN1-221ENST00000531068 ACO2Q99798 780 aaKnown RBP12.06□□□□□ -0.48
CAPN1-221ENST00000531068 TCHPQ9BT92 498 aa12.06□□□□□ -0.48
CAPN1-221ENST00000531068 PHF7Q9BWX1 381 aaPredicted RBP12.06□□□□□ -0.48
CAPN1-221ENST00000531068 S1PR5Q9H228 398 aa12.06□□□□□ -0.48
CAPN1-221ENST00000531068 SNTG2Q9NY99 539 aa12.06□□□□□ -0.48
CAPN1-221ENST00000531068 ARHGAP28Q9P2N2 729 aa12.06□□□□□ -0.48
CAPN1-221ENST00000531068 DPP7Q9UHL4 492 aa12.06□□□□□ -0.48
CAPN1-221ENST00000531068 TTLL13PA6NNM8 815 aa12.05□□□□□ -0.48
CAPN1-221ENST00000531068 SFI1A8K8P3 1242 aa12.05□□□□□ -0.48
CAPN1-221ENST00000531068 RBM10P98175 930 aaKnown RBP12.05□□□□□ -0.48
CAPN1-221ENST00000531068 MAPK7Q13164 816 aa12.05□□□□□ -0.48
CAPN1-221ENST00000531068 TUSC3Q13454 348 aa12.05□□□□□ -0.48
CAPN1-221ENST00000531068 CBX2Q14781 532 aaPredicted RBP12.05□□□□□ -0.48
CAPN1-221ENST00000531068 PTPN14Q15678 1187 aa12.05□□□□□ -0.48
CAPN1-221ENST00000531068 USP41Q3LFD5 358 aa12.05□□□□□ -0.48
CAPN1-221ENST00000531068 EEF1DP3Q658K8 133 aa12.05□□□□□ -0.48
CAPN1-221ENST00000531068 SYCE2Q6PIF2 218 aa12.05□□□□□ -0.48
CAPN1-221ENST00000531068 AUTS2Q8WXX7 1259 aa12.05□□□□□ -0.48
CAPN1-221ENST00000531068 SUSD6Q92537 303 aa12.05□□□□□ -0.48
CAPN1-221ENST00000531068 NECTIN4Q96NY8 510 aa12.05□□□□□ -0.48
CAPN1-221ENST00000531068 KLHL5Q96PQ7 755 aa12.05□□□□□ -0.48
CAPN1-221ENST00000531068 HERC2P3Q9BVR0 1158 aa12.05□□□□□ -0.48
CAPN1-221ENST00000531068 CCDC94Q9BW85 323 aaPredicted RBP12.05□□□□□ -0.48
CAPN1-221ENST00000531068 CCSER1Q9C0I3 900 aa12.05□□□□□ -0.48
CAPN1-221ENST00000531068 ADAM7Q9H2U9 754 aa12.05□□□□□ -0.48
CAPN1-221ENST00000531068 EPHX3Q9H6B9 360 aa12.05□□□□□ -0.48
CAPN1-221ENST00000531068 TOPORSQ9NS56 1045 aaPredicted RBP12.05□□□□□ -0.48
CAPN1-221ENST00000531068 CCDC39Q9UFE4 941 aa12.05□□□□□ -0.48
CAPN1-221ENST00000531068 ODF2LQ9ULJ1 636 aa12.05□□□□□ -0.48
CAPN1-221ENST00000531068 USP20Q9Y2K6 914 aa12.05□□□□□ -0.48
CAPN1-221ENST00000531068 GDAQ9Y2T3 454 aa12.05□□□□□ -0.48
CAPN1-221ENST00000531068 COL4A4P53420 1690 aaPredicted RBP12.04□□□□□ -0.48
CAPN1-221ENST00000531068 SLC16A4O15374 487 aa12.04□□□□□ -0.48
CAPN1-221ENST00000531068 DCXO43602 365 aa12.04□□□□□ -0.48
CAPN1-221ENST00000531068 LILRB3O75022 631 aa12.04□□□□□ -0.48
CAPN1-221ENST00000531068 RECQL4O94761 1208 aa12.04□□□□□ -0.48
CAPN1-221ENST00000531068 C1RP00736 705 aa12.04□□□□□ -0.48
CAPN1-221ENST00000531068 KRT18P05783 430 aaKnown RBP12.04□□□□□ -0.48
CAPN1-221ENST00000531068 ADH1AP07327 375 aa12.04□□□□□ -0.48
CAPN1-221ENST00000531068 MCF2P10911 925 aa12.04□□□□□ -0.48
CAPN1-221ENST00000531068 ABCD1P33897 745 aa12.04□□□□□ -0.48
CAPN1-221ENST00000531068 TXLNAP40222 546 aa12.04□□□□□ -0.48
CAPN1-221ENST00000531068 GRM5P41594 1212 aa12.04□□□□□ -0.48
CAPN1-221ENST00000531068 MTHFRP42898 656 aa12.04□□□□□ -0.48
CAPN1-221ENST00000531068 GLUD2P49448 558 aa12.04□□□□□ -0.48
CAPN1-221ENST00000531068 UBE2HP62256 183 aa12.04□□□□□ -0.48
CAPN1-221ENST00000531068 CREMQ03060 361 aa12.04□□□□□ -0.48
CAPN1-221ENST00000531068 RAD51AP2Q09MP3 1159 aa12.04□□□□□ -0.48
CAPN1-221ENST00000531068 ELAVL2Q12926 359 aaKnown RBP12.04□□□□□ -0.48
CAPN1-221ENST00000531068 HSP90AA2PQ14568 343 aaPredicted RBP12.04□□□□□ -0.48
CAPN1-221ENST00000531068 TMEM31Q5JXX7 168 aa12.04□□□□□ -0.48
CAPN1-221ENST00000531068 ATAT1Q5SQI0 421 aa12.04□□□□□ -0.48
CAPN1-221ENST00000531068 KIAA0319Q5VV43 1072 aa12.04□□□□□ -0.48
CAPN1-221ENST00000531068 GPBP1Q86WP2 473 aa12.04□□□□□ -0.48
CAPN1-221ENST00000531068 TMEM161BQ8NDZ6 487 aa12.04□□□□□ -0.48
CAPN1-221ENST00000531068 SLC22A17Q8WUG5 538 aa12.04□□□□□ -0.48
CAPN1-221ENST00000531068 SPATA32Q96LK8 384 aa12.04□□□□□ -0.48
CAPN1-221ENST00000531068 RIPOR3Q96MK2 946 aa12.04□□□□□ -0.48
CAPN1-221ENST00000531068 TARS2Q9BW92 718 aaKnown RBP12.04□□□□□ -0.48
CAPN1-221ENST00000531068 VN1R3Q9BXE9 311 aa12.04□□□□□ -0.48
CAPN1-221ENST00000531068 GRPEL1Q9HAV7 217 aa12.04□□□□□ -0.48
CAPN1-221ENST00000531068 PTPRHQ9HD43 1115 aa12.04□□□□□ -0.48
CAPN1-221ENST00000531068 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.04□□□□□ -0.48
CAPN1-221ENST00000531068 CHST7Q9NS84 486 aa12.04□□□□□ -0.48
CAPN1-221ENST00000531068 MARCH5Q9NX47 278 aa12.04□□□□□ -0.48
CAPN1-221ENST00000531068 ADAM28Q9UKQ2 775 aa12.04□□□□□ -0.48
CAPN1-221ENST00000531068 SRPRBQ9Y5M8 271 aaKnown RBP12.04□□□□□ -0.48
CAPN1-221ENST00000531068 RALGAPA2Q2PPJ7 1873 aa12.04□□□□□ -0.48
CAPN1-221ENST00000531068 FAM237AA0A1B0GTK4 181 aa12.03□□□□□ -0.48
CAPN1-221ENST00000531068 A0A1W2PQ27 194 aa12.03□□□□□ -0.48
CAPN1-221ENST00000531068 A0A1W2PQ64 194 aa12.03□□□□□ -0.48
CAPN1-221ENST00000531068 A0A1W2PQD8 194 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms