RNA–Protein interactions for RNA: ENST00000531014.5

CTNND1-229, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-229ENST00000531014 MAGEA13PA6NCF6 341 aa7.65□□□□□ -1.19
CTNND1-229ENST00000531014 PODXLO00592 558 aa7.65□□□□□ -1.19
CTNND1-229ENST00000531014 LIG4P49917 911 aa7.65□□□□□ -1.19
CTNND1-229ENST00000531014 ARL4CP56559 192 aa7.65□□□□□ -1.19
CTNND1-229ENST00000531014 PPP2R2AP63151 447 aa7.65□□□□□ -1.19
CTNND1-229ENST00000531014 BTN3A2P78410 334 aa7.65□□□□□ -1.19
CTNND1-229ENST00000531014 COG2Q14746 738 aa7.65□□□□□ -1.19
CTNND1-229ENST00000531014 EXOC3L4Q17RC7 722 aa7.65□□□□□ -1.19
CTNND1-229ENST00000531014 ARMCX5Q6P1M9 558 aa7.65□□□□□ -1.19
CTNND1-229ENST00000531014 ARL10Q8N8L6 244 aa7.65□□□□□ -1.19
CTNND1-229ENST00000531014 ARHGAP45Q92619 1136 aa7.65□□□□□ -1.19
CTNND1-229ENST00000531014 MLPHQ9BV36 600 aaPredicted RBP7.65□□□□□ -1.19
CTNND1-229ENST00000531014 MRPL47Q9HD33 250 aaKnown RBP7.65□□□□□ -1.19
CTNND1-229ENST00000531014 IL1RAPL1Q9NZN1 696 aa7.65□□□□□ -1.19
CTNND1-229ENST00000531014 MAGED2Q9UNF1 606 aaPredicted RBP7.65□□□□□ -1.19
CTNND1-229ENST00000531014 FNDC3AQ9Y2H6 1198 aaKnown RBP7.65□□□□□ -1.19
CTNND1-229ENST00000531014 ZNF233A6NK53 670 aa7.64□□□□□ -1.19
CTNND1-229ENST00000531014 PDZK1P1A8MUH7 402 aa7.64□□□□□ -1.19
CTNND1-229ENST00000531014 POTECB2RU33 542 aa7.64□□□□□ -1.19
CTNND1-229ENST00000531014 CCDC188H7C350 402 aa7.64□□□□□ -1.19
CTNND1-229ENST00000531014 ACADSP16219 412 aa7.64□□□□□ -1.19
CTNND1-229ENST00000531014 NSUN2Q08J23 767 aaKnown RBP eCLIP7.64□□□□□ -1.19
CTNND1-229ENST00000531014 CSTF3Q12996 717 aaKnown RBP7.64□□□□□ -1.19
CTNND1-229ENST00000531014 GCKRQ14397 625 aa7.64□□□□□ -1.19
CTNND1-229ENST00000531014 USP39Q53GS9 565 aaKnown RBP7.64□□□□□ -1.19
CTNND1-229ENST00000531014 NDUFAF2Q8N183 169 aa7.64□□□□□ -1.19
CTNND1-229ENST00000531014 TCAIMQ8N3R3 496 aa7.64□□□□□ -1.19
CTNND1-229ENST00000531014 CCNYL1Q8N7R7 359 aa7.64□□□□□ -1.19
CTNND1-229ENST00000531014 ANKRD44Q8N8A2 993 aa7.64□□□□□ -1.19
CTNND1-229ENST00000531014 VPS37AQ8NEZ2 397 aa7.64□□□□□ -1.19
CTNND1-229ENST00000531014 LPIN2Q92539 896 aa7.64□□□□□ -1.19
CTNND1-229ENST00000531014 CMTM5Q96DZ9 223 aa7.64□□□□□ -1.19
CTNND1-229ENST00000531014 CATSPER2Q96P56 530 aa7.64□□□□□ -1.19
CTNND1-229ENST00000531014 TGS1Q96RS0 853 aaKnown RBP7.64□□□□□ -1.19
CTNND1-229ENST00000531014 MSRAQ9UJ68 235 aa7.64□□□□□ -1.19
CTNND1-229ENST00000531014 WDR64B1ANS9 1081 aa7.64□□□□□ -1.19
CTNND1-229ENST00000531014 ZBED1O96006 694 aa7.64□□□□□ -1.19
CTNND1-229ENST00000531014 TMOD1P28289 359 aa7.64□□□□□ -1.19
CTNND1-229ENST00000531014 GCLCP48506 637 aaPredicted RBP7.64□□□□□ -1.19
CTNND1-229ENST00000531014 TRIP10Q15642 601 aa7.64□□□□□ -1.19
CTNND1-229ENST00000531014 FAM47CQ5HY64 1035 aa7.64□□□□□ -1.19
CTNND1-229ENST00000531014 STRIP1Q5VSL9 837 aa7.64□□□□□ -1.19
CTNND1-229ENST00000531014 RSRC2Q7L4I2 434 aaKnown RBP7.64□□□□□ -1.19
CTNND1-229ENST00000531014 OR8H2Q8N162 312 aa7.64□□□□□ -1.19
CTNND1-229ENST00000531014 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.64□□□□□ -1.19
CTNND1-229ENST00000531014 C18orf25Q96B23 403 aaPredicted RBP7.64□□□□□ -1.19
CTNND1-229ENST00000531014 TUBGCP2Q9BSJ2 902 aa7.64□□□□□ -1.19
CTNND1-229ENST00000531014 GOLPH3LQ9H4A5 285 aa7.64□□□□□ -1.19
CTNND1-229ENST00000531014 BCL9LQ86UU0 1499 aa7.64□□□□□ -1.19
CTNND1-229ENST00000531014 ANGPT2O15123 496 aa7.64□□□□□ -1.19
CTNND1-229ENST00000531014 SASH1O94885 1247 aa7.64□□□□□ -1.19
CTNND1-229ENST00000531014 KPNB1Q14974 876 aaKnown RBP7.64□□□□□ -1.19
CTNND1-229ENST00000531014 C8orf34Q49A92 452 aa7.64□□□□□ -1.19
CTNND1-229ENST00000531014 C10orf76Q5T2E6 689 aa7.64□□□□□ -1.19
CTNND1-229ENST00000531014 RFX8Q6ZV50 586 aa7.64□□□□□ -1.19
CTNND1-229ENST00000531014 FAM133AQ8N9E0 248 aa7.64□□□□□ -1.19
CTNND1-229ENST00000531014 CHURC1Q8WUH1 139 aa7.64□□□□□ -1.19
CTNND1-229ENST00000531014 VPS50Q96JG6 964 aa7.64□□□□□ -1.19
CTNND1-229ENST00000531014 FAM81BQ96LP2 452 aa7.64□□□□□ -1.19
CTNND1-229ENST00000531014 ADPGKQ9BRR6 497 aa7.64□□□□□ -1.19
CTNND1-229ENST00000531014 GPCPD1Q9NPB8 672 aa7.64□□□□□ -1.19
CTNND1-229ENST00000531014 ATAD3AQ9NVI7 634 aa7.64□□□□□ -1.19
CTNND1-229ENST00000531014 ADD3Q9UEY8 706 aaKnown RBP7.64□□□□□ -1.19
CTNND1-229ENST00000531014 PXDNQ92626 1479 aa7.64□□□□□ -1.19
CTNND1-229ENST00000531014 KDRP35968 1356 aa7.64□□□□□ -1.19
CTNND1-229ENST00000531014 C5orf58C9J3I9 102 aa7.64□□□□□ -1.19
CTNND1-229ENST00000531014 EIF3HO15372 352 aaKnown RBP eCLIP7.64□□□□□ -1.192e-7■■□□□ 12
CTNND1-229ENST00000531014 MSCO60682 206 aa7.64□□□□□ -1.19
CTNND1-229ENST00000531014 UBTFL6P0CB48 400 aaPredicted RBP7.64□□□□□ -1.19
CTNND1-229ENST00000531014 MYCLP12524 364 aaPredicted RBP7.64□□□□□ -1.19
CTNND1-229ENST00000531014 KCNA2P16389 499 aa7.64□□□□□ -1.19
CTNND1-229ENST00000531014 EFR3AQ14156 821 aa7.64□□□□□ -1.19
CTNND1-229ENST00000531014 ANGEL2Q5VTE6 544 aaKnown RBP7.64□□□□□ -1.19
CTNND1-229ENST00000531014 ADALQ6DHV7 355 aa7.64□□□□□ -1.19
CTNND1-229ENST00000531014 TTC33Q6PID6 262 aaPredicted RBP7.64□□□□□ -1.19
CTNND1-229ENST00000531014 GPBP1Q86WP2 473 aa7.64□□□□□ -1.19
CTNND1-229ENST00000531014 TTC8Q8TAM2 541 aa7.64□□□□□ -1.19
CTNND1-229ENST00000531014 RASSF5Q8WWW0 418 aa7.64□□□□□ -1.19
CTNND1-229ENST00000531014 NT5C1BQ96P26 610 aa7.64□□□□□ -1.19
CTNND1-229ENST00000531014 PANX2Q96RD6 677 aa7.64□□□□□ -1.19
CTNND1-229ENST00000531014 SAYSD1Q9NPB0 183 aa7.64□□□□□ -1.19
CTNND1-229ENST00000531014 LMBRD1Q9NUN5 540 aa7.64□□□□□ -1.19
CTNND1-229ENST00000531014 ING3Q9NXR8 418 aa7.64□□□□□ -1.19
CTNND1-229ENST00000531014 EMC3Q9P0I2 261 aa7.64□□□□□ -1.19
CTNND1-229ENST00000531014 FBXO40Q9UH90 709 aa7.64□□□□□ -1.19
CTNND1-229ENST00000531014 PYCARDQ9ULZ3 195 aa7.64□□□□□ -1.19
CTNND1-229ENST00000531014 NFU1Q9UMS0 254 aa7.64□□□□□ -1.19
CTNND1-229ENST00000531014 A0A0B4J269 797 aa7.63□□□□□ -1.19
CTNND1-229ENST00000531014 SMCO3A2RU48 225 aa7.63□□□□□ -1.19
CTNND1-229ENST00000531014 SFI1A8K8P3 1242 aa7.63□□□□□ -1.19
CTNND1-229ENST00000531014 DDX39AO00148 427 aaKnown RBP7.63□□□□□ -1.19
CTNND1-229ENST00000531014 MEFVO15553 781 aaPredicted RBP7.63□□□□□ -1.19
CTNND1-229ENST00000531014 COX10Q12887 443 aa7.63□□□□□ -1.19
CTNND1-229ENST00000531014 TUBB3Q13509 450 aa7.63□□□□□ -1.19
CTNND1-229ENST00000531014 SLC25A24Q6NUK1 477 aa7.63□□□□□ -1.19
CTNND1-229ENST00000531014 FBXO38Q6PIJ6 1188 aa7.63□□□□□ -1.19
CTNND1-229ENST00000531014 ANKS3Q6ZW76 656 aa7.63□□□□□ -1.19
CTNND1-229ENST00000531014 ARHGAP22Q7Z5H3 698 aa7.63□□□□□ -1.19
CTNND1-229ENST00000531014 LZTS2Q9BRK4 669 aa7.63□□□□□ -1.19
CTNND1-229ENST00000531014 VPS11Q9H270 941 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms