RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 STK4Q13043 487 aa8.67□□□□□ -1.02
CSDE1-214ENST00000530886 KCTD19Q17RG1 926 aaPredicted RBP8.67□□□□□ -1.02
CSDE1-214ENST00000530886 C1orf228Q6PIY5 440 aa8.67□□□□□ -1.02
CSDE1-214ENST00000530886 SFR1Q86XK3 245 aa8.67□□□□□ -1.02
CSDE1-214ENST00000530886 FNBP1Q96RU3 617 aa8.67□□□□□ -1.02
CSDE1-214ENST00000530886 ANKRD2Q9GZV1 360 aa8.67□□□□□ -1.02
CSDE1-214ENST00000530886 UBN1Q9NPG3 1134 aa8.67□□□□□ -1.02
CSDE1-214ENST00000530886 NKIRAS1Q9NYS0 192 aa8.67□□□□□ -1.02
CSDE1-214ENST00000530886 PHTF1Q9UMS5 762 aa8.67□□□□□ -1.02
CSDE1-214ENST00000530886 NUMBLQ9Y6R0 609 aa8.67□□□□□ -1.02
CSDE1-214ENST00000530886 ZNF532Q9HCE3 1301 aa8.67□□□□□ -1.02
CSDE1-214ENST00000530886 DCCP43146 1447 aa8.67□□□□□ -1.02
CSDE1-214ENST00000530886 hCG_2014768A0A024R1R8 64 aa8.67□□□□□ -1.02
CSDE1-214ENST00000530886 CBX6O95503 412 aa8.67□□□□□ -1.02
CSDE1-214ENST00000530886 GH1P01241 217 aa8.67□□□□□ -1.02
CSDE1-214ENST00000530886 SMIM18P0DKX4 95 aa8.67□□□□□ -1.02
CSDE1-214ENST00000530886 BRAFP15056 766 aa8.67□□□□□ -1.02
CSDE1-214ENST00000530886 ANPEPP15144 967 aa8.67□□□□□ -1.02
CSDE1-214ENST00000530886 TAF1BQ53T94 588 aaPredicted RBP8.67□□□□□ -1.02
CSDE1-214ENST00000530886 SOGA3Q5TF21 947 aa8.67□□□□□ -1.02
CSDE1-214ENST00000530886 TMCO4Q5TGY1 634 aa8.67□□□□□ -1.02
CSDE1-214ENST00000530886 TCERG1LQ5VWI1 586 aa8.67□□□□□ -1.02
CSDE1-214ENST00000530886 NET1Q7Z628 596 aaPredicted RBP8.67□□□□□ -1.02
CSDE1-214ENST00000530886 CLNKQ7Z7G1 428 aa8.67□□□□□ -1.02
CSDE1-214ENST00000530886 SATL1Q86VE3 508 aa8.67□□□□□ -1.02
CSDE1-214ENST00000530886 ZNF654Q8IZM8 581 aa8.67□□□□□ -1.02
CSDE1-214ENST00000530886 ARHGAP24Q8N264 748 aa8.67□□□□□ -1.02
CSDE1-214ENST00000530886 PROM2Q8N271 834 aa8.67□□□□□ -1.02
CSDE1-214ENST00000530886 NGDNQ8NEJ9 315 aaKnown RBP8.67□□□□□ -1.02
CSDE1-214ENST00000530886 MGARPQ8TDB4 240 aa8.67□□□□□ -1.02
CSDE1-214ENST00000530886 TRIM9Q9C026 710 aa8.67□□□□□ -1.02
CSDE1-214ENST00000530886 METTL5Q9NRN9 209 aaKnown RBP8.67□□□□□ -1.02
CSDE1-214ENST00000530886 EURLQ9NYK6 297 aa8.67□□□□□ -1.02
CSDE1-214ENST00000530886 ZFP69BQ9UJL9 534 aa8.67□□□□□ -1.02
CSDE1-214ENST00000530886 RTL9Q8NET4 1388 aa8.67□□□□□ -1.02
CSDE1-214ENST00000530886 ZNF142P52746 1687 aaPredicted RBP8.66□□□□□ -1.02
CSDE1-214ENST00000530886 SMIM22K7EJ46 135 aa8.66□□□□□ -1.02
CSDE1-214ENST00000530886 IPO5O00410 1097 aaKnown RBP8.66□□□□□ -1.02
CSDE1-214ENST00000530886 PRDM1O75626 825 aa8.66□□□□□ -1.02
CSDE1-214ENST00000530886 PDE6AP16499 860 aa8.66□□□□□ -1.02
CSDE1-214ENST00000530886 GALK1P51570 392 aa8.66□□□□□ -1.02
CSDE1-214ENST00000530886 MARSP56192 900 aaKnown RBP8.66□□□□□ -1.02
CSDE1-214ENST00000530886 PFKPQ01813 784 aa8.66□□□□□ -1.02
CSDE1-214ENST00000530886 ASPHQ12797 758 aa8.66□□□□□ -1.02
CSDE1-214ENST00000530886 INAQ16352 499 aa8.66□□□□□ -1.02
CSDE1-214ENST00000530886 USP41Q3LFD5 358 aa8.66□□□□□ -1.02
CSDE1-214ENST00000530886 ZNF362Q5T0B9 420 aaPredicted RBP8.66□□□□□ -1.02
CSDE1-214ENST00000530886 CCDC125Q86Z20 511 aa8.66□□□□□ -1.02
CSDE1-214ENST00000530886 ARL10Q8N8L6 244 aa8.66□□□□□ -1.02
CSDE1-214ENST00000530886 DENND1AQ8TEH3 1009 aa8.66□□□□□ -1.02
CSDE1-214ENST00000530886 ZFRQ96KR1 1074 aaKnown RBP8.66□□□□□ -1.02
CSDE1-214ENST00000530886 ARMCX3Q9UH62 379 aaPredicted RBP8.66□□□□□ -1.02
CSDE1-214ENST00000530886 ZNF180Q9UJW8 692 aa8.66□□□□□ -1.02
CSDE1-214ENST00000530886 NCANO14594 1321 aa8.66□□□□□ -1.02
CSDE1-214ENST00000530886 FAM205AQ6ZU69 1335 aa8.66□□□□□ -1.02
CSDE1-214ENST00000530886 DDX60LQ5H9U9 1706 aaKnown RBP8.66□□□□□ -1.02
CSDE1-214ENST00000530886 FAM196BA6NMK8 535 aa8.66□□□□□ -1.02
CSDE1-214ENST00000530886 PRPF4O43172 522 aaKnown RBP eCLIP8.66□□□□□ -1.025e-7■■■■□ 22.3
CSDE1-214ENST00000530886 CSDE1O75534 798 aaKnown RBP8.66□□□□□ -1.02
CSDE1-214ENST00000530886 GGPS1O95749 300 aa8.66□□□□□ -1.02
CSDE1-214ENST00000530886 FGGP02679 453 aa8.66□□□□□ -1.02
CSDE1-214ENST00000530886 PYGMP11217 842 aa8.66□□□□□ -1.02
CSDE1-214ENST00000530886 UQCRBP14927 111 aa8.66□□□□□ -1.02
CSDE1-214ENST00000530886 CREB1P16220 341 aa8.66□□□□□ -1.02
CSDE1-214ENST00000530886 S100A1P23297 94 aa8.66□□□□□ -1.02
CSDE1-214ENST00000530886 PRKCIP41743 596 aa8.66□□□□□ -1.02
CSDE1-214ENST00000530886 RPL21P46778 160 aaKnown RBP8.66□□□□□ -1.02
CSDE1-214ENST00000530886 ARFIP2P53365 341 aa8.66□□□□□ -1.02
CSDE1-214ENST00000530886 ARHGAP4P98171 946 aa8.66□□□□□ -1.02
CSDE1-214ENST00000530886 RELAQ04206 551 aa8.66□□□□□ -1.02
CSDE1-214ENST00000530886 WTAPQ15007 396 aa8.66□□□□□ -1.02
CSDE1-214ENST00000530886 MAP7D1Q3KQU3 841 aa8.66□□□□□ -1.02
CSDE1-214ENST00000530886 MAP3K21Q5TCX8 1036 aa8.66□□□□□ -1.02
CSDE1-214ENST00000530886 KLHDC10Q6PID8 442 aa8.66□□□□□ -1.02
CSDE1-214ENST00000530886 PATL1Q86TB9 770 aaKnown RBP8.66□□□□□ -1.02
CSDE1-214ENST00000530886 TREML1Q86YW5 311 aa8.66□□□□□ -1.02
CSDE1-214ENST00000530886 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.66□□□□□ -1.023e-12■□□□□ 9.4
CSDE1-214ENST00000530886 NMD3Q96D46 503 aaKnown RBP8.66□□□□□ -1.02
CSDE1-214ENST00000530886 CCDC113Q9H0I3 377 aa8.66□□□□□ -1.02
CSDE1-214ENST00000530886 TBX22Q9Y458 520 aa8.66□□□□□ -1.02
CSDE1-214ENST00000530886 SMIM23A6NLE4 172 aa8.66□□□□□ -1.02
CSDE1-214ENST00000530886 LAD1O00515 517 aa8.66□□□□□ -1.02
CSDE1-214ENST00000530886 PDE5AO76074 875 aa8.66□□□□□ -1.02
CSDE1-214ENST00000530886 CTNNA2P26232 953 aa8.66□□□□□ -1.02
CSDE1-214ENST00000530886 SLCO1A2P46721 670 aa8.66□□□□□ -1.02
CSDE1-214ENST00000530886 VPS41P49754 854 aa8.66□□□□□ -1.02
CSDE1-214ENST00000530886 CCT8P50990 548 aa8.66□□□□□ -1.02
CSDE1-214ENST00000530886 PDE4DQ08499 809 aa8.66□□□□□ -1.02
CSDE1-214ENST00000530886 ASIC2Q16515 512 aa8.66□□□□□ -1.02
CSDE1-214ENST00000530886 PDK4Q16654 411 aa8.66□□□□□ -1.02
CSDE1-214ENST00000530886 CYP1B1Q16678 543 aa8.66□□□□□ -1.02
CSDE1-214ENST00000530886 INF2Q27J81 1249 aa8.66□□□□□ -1.02
CSDE1-214ENST00000530886 ZNF449Q6P9G9 518 aa8.66□□□□□ -1.02
CSDE1-214ENST00000530886 AAGABQ6PD74 315 aa8.66□□□□□ -1.02
CSDE1-214ENST00000530886 UGT2A3Q6UWM9 527 aa8.66□□□□□ -1.02
CSDE1-214ENST00000530886 FAM186BQ8IYM0 893 aa8.66□□□□□ -1.02
CSDE1-214ENST00000530886 GUF1Q8N442 669 aaKnown RBP8.66□□□□□ -1.02
CSDE1-214ENST00000530886 SYT2Q8N9I0 419 aaPredicted RBP8.66□□□□□ -1.02
CSDE1-214ENST00000530886 GDAP1Q8TB36 358 aa8.66□□□□□ -1.02
CSDE1-214ENST00000530886 DYDC2Q96IM9 177 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms