RNA–Protein interactions for RNA: ENST00000530516.1

NUP98-218, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 391 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-218ENST00000530516 BLOC1S1P78537 153 aa4.15□□□□□ -1.75
NUP98-218ENST00000530516 CDK17Q00537 523 aa4.15□□□□□ -1.75
NUP98-218ENST00000530516 PPP3CAQ08209 521 aa4.15□□□□□ -1.75
NUP98-218ENST00000530516 ADRM1Q16186 407 aa4.15□□□□□ -1.75
NUP98-218ENST00000530516 MST1LQ2TV78 715 aa4.15□□□□□ -1.75
NUP98-218ENST00000530516 TOR2AQ5JU69 321 aa4.15□□□□□ -1.75
NUP98-218ENST00000530516 HECTD2Q5U5R9 776 aa4.15□□□□□ -1.75
NUP98-218ENST00000530516 RNF219Q5W0B1 726 aaPredicted RBP4.15□□□□□ -1.75
NUP98-218ENST00000530516 Q6ZVL8 140 aa4.15□□□□□ -1.75
NUP98-218ENST00000530516 FAM83AQ86UY5 434 aa4.15□□□□□ -1.75
NUP98-218ENST00000530516 DDX42Q86XP3 938 aaKnown RBP eCLIP4.15□□□□□ -1.75
NUP98-218ENST00000530516 ADGRG3Q86Y34 549 aa4.15□□□□□ -1.75
NUP98-218ENST00000530516 XYLT1Q86Y38 959 aa4.15□□□□□ -1.75
NUP98-218ENST00000530516 OR52N2Q8NGI0 321 aa4.15□□□□□ -1.75
NUP98-218ENST00000530516 CPT1CQ8TCG5 803 aa4.15□□□□□ -1.75
NUP98-218ENST00000530516 AUTS2Q8WXX7 1259 aa4.15□□□□□ -1.75
NUP98-218ENST00000530516 DCLRE1CQ96SD1 692 aaKnown RBP4.15□□□□□ -1.75
NUP98-218ENST00000530516 MLST8Q9BVC4 326 aa4.15□□□□□ -1.75
NUP98-218ENST00000530516 ADARB2Q9NS39 739 aaKnown RBP4.15□□□□□ -1.75
NUP98-218ENST00000530516 GPRC5DQ9NZD1 345 aa4.15□□□□□ -1.75
NUP98-218ENST00000530516 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.15□□□□□ -1.75
NUP98-218ENST00000530516 SORCS3Q9UPU3 1222 aa4.15□□□□□ -1.75
NUP98-218ENST00000530516 DNAJC6O75061 913 aa4.14□□□□□ -1.75
NUP98-218ENST00000530516 MTNR1BP49286 362 aa4.14□□□□□ -1.75
NUP98-218ENST00000530516 C21orf58P58505 322 aa4.14□□□□□ -1.75
NUP98-218ENST00000530516 ERCC6LQ2NKX8 1250 aa4.14□□□□□ -1.75
NUP98-218ENST00000530516 MFSD14BQ5SR56 506 aa4.14□□□□□ -1.75
NUP98-218ENST00000530516 PRAMEF14Q5SWL7 426 aa4.14□□□□□ -1.75
NUP98-218ENST00000530516 ANKS6Q68DC2 871 aa4.14□□□□□ -1.75
NUP98-218ENST00000530516 BTNL9Q6UXG8 535 aa4.14□□□□□ -1.75
NUP98-218ENST00000530516 DOK3Q7L591 496 aa4.14□□□□□ -1.75
NUP98-218ENST00000530516 GPRIN1Q7Z2K8 1008 aa4.14□□□□□ -1.75
NUP98-218ENST00000530516 VRK3Q8IV63 474 aa4.14□□□□□ -1.75
NUP98-218ENST00000530516 CBARPQ8N350 705 aaPredicted RBP4.14□□□□□ -1.75
NUP98-218ENST00000530516 SUPT20HQ8NEM7 779 aa4.14□□□□□ -1.75
NUP98-218ENST00000530516 GPR150Q8NGU9 434 aa4.14□□□□□ -1.75
NUP98-218ENST00000530516 ATL2Q8NHH9 583 aa4.14□□□□□ -1.75
NUP98-218ENST00000530516 HOXB13Q92826 284 aaPredicted RBP4.14□□□□□ -1.75
NUP98-218ENST00000530516 CEP95Q96GE4 821 aa4.14□□□□□ -1.75
NUP98-218ENST00000530516 COQ10AQ96MF6 247 aa4.14□□□□□ -1.75
NUP98-218ENST00000530516 IFT122Q9HBG6 1241 aa4.14□□□□□ -1.75
NUP98-218ENST00000530516 SPC25Q9HBM1 224 aa4.14□□□□□ -1.75
NUP98-218ENST00000530516 DMRT3Q9NQL9 472 aa4.14□□□□□ -1.75
NUP98-218ENST00000530516 COL4A3Q01955 1670 aa4.13□□□□□ -1.75
NUP98-218ENST00000530516 DIRC3C9JPN6 131 aa4.13□□□□□ -1.75
NUP98-218ENST00000530516 MASP2O00187 686 aa4.13□□□□□ -1.75
NUP98-218ENST00000530516 SCAF4O95104 1147 aaKnown RBP4.13□□□□□ -1.75
NUP98-218ENST00000530516 CDK4P11802 303 aa4.13□□□□□ -1.75
NUP98-218ENST00000530516 OSMP13725 252 aa4.13□□□□□ -1.75
NUP98-218ENST00000530516 CPEP16870 476 aa4.13□□□□□ -1.75
NUP98-218ENST00000530516 NR4A1P22736 598 aa4.13□□□□□ -1.75
NUP98-218ENST00000530516 ZFP36P26651 326 aaKnown RBP4.13□□□□□ -1.75
NUP98-218ENST00000530516 CDKN1CP49918 316 aaPredicted RBP4.13□□□□□ -1.75
NUP98-218ENST00000530516 AMPD3Q01432 767 aa4.13□□□□□ -1.75
NUP98-218ENST00000530516 FAPQ12884 760 aa4.13□□□□□ -1.75
NUP98-218ENST00000530516 INAVAQ3KP66 663 aa4.13□□□□□ -1.75
NUP98-218ENST00000530516 SYT12Q8IV01 421 aa4.13□□□□□ -1.75
NUP98-218ENST00000530516 REPS2Q8NFH8 660 aa4.13□□□□□ -1.75
NUP98-218ENST00000530516 MDM1Q8TC05 714 aa4.13□□□□□ -1.75
NUP98-218ENST00000530516 ZNF480Q8WV37 535 aa4.13□□□□□ -1.75
NUP98-218ENST00000530516 RIN2Q8WYP3 895 aaPredicted RBP4.13□□□□□ -1.75
NUP98-218ENST00000530516 CPPED1Q9BRF8 314 aaPredicted RBP4.13□□□□□ -1.75
NUP98-218ENST00000530516 KCNH6Q9H252 994 aa4.13□□□□□ -1.75
NUP98-218ENST00000530516 TMX1Q9H3N1 280 aa4.13□□□□□ -1.75
NUP98-218ENST00000530516 ZNF277Q9NRM2 450 aaPredicted RBP4.13□□□□□ -1.75
NUP98-218ENST00000530516 DNAJC28Q9NX36 388 aa4.13□□□□□ -1.75
NUP98-218ENST00000530516 EIF2B4Q9UI10 523 aaKnown RBP4.13□□□□□ -1.75
NUP98-218ENST00000530516 ATP8A1Q9Y2Q0 1164 aa4.13□□□□□ -1.75
NUP98-218ENST00000530516 COX11Q9Y6N1 276 aa4.13□□□□□ -1.75
NUP98-218ENST00000530516 RPTORQ8N122 1335 aa4.13□□□□□ -1.75
NUP98-218ENST00000530516 ATRNL1Q5VV63 1379 aa4.13□□□□□ -1.75
NUP98-218ENST00000530516 RNASET2O00584 256 aaKnown RBP4.12□□□□□ -1.75
NUP98-218ENST00000530516 GASTP01350 101 aa4.12□□□□□ -1.75
NUP98-218ENST00000530516 ADSLP30566 484 aaPredicted RBP4.12□□□□□ -1.75
NUP98-218ENST00000530516 APBA1Q02410 837 aa4.12□□□□□ -1.75
NUP98-218ENST00000530516 KLF1Q13351 362 aaPredicted RBP4.12□□□□□ -1.75
NUP98-218ENST00000530516 VPS72Q15906 364 aa4.12□□□□□ -1.75
NUP98-218ENST00000530516 ZKSCAN2Q63HK3 967 aa4.12□□□□□ -1.75
NUP98-218ENST00000530516 OLFML1Q6UWY5 402 aa4.12□□□□□ -1.75
NUP98-218ENST00000530516 ARHGEF19Q8IW93 802 aa4.12□□□□□ -1.75
NUP98-218ENST00000530516 TRMT2AQ8IZ69 625 aaKnown RBP4.12□□□□□ -1.75
NUP98-218ENST00000530516 CNTD1Q8N815 330 aa4.12□□□□□ -1.75
NUP98-218ENST00000530516 GPR156Q8NFN8 814 aa4.12□□□□□ -1.75
NUP98-218ENST00000530516 SLC9A6Q92581 669 aa4.12□□□□□ -1.75
NUP98-218ENST00000530516 BBC3Q96PG8 261 aaPredicted RBP4.12□□□□□ -1.75
NUP98-218ENST00000530516 ACE2Q9BYF1 805 aaPredicted RBP4.12□□□□□ -1.75
NUP98-218ENST00000530516 EPC1Q9H2F5 836 aa4.12□□□□□ -1.75
NUP98-218ENST00000530516 SLC5A4Q9NY91 659 aa4.12□□□□□ -1.75
NUP98-218ENST00000530516 MCM8Q9UJA3 840 aa4.12□□□□□ -1.75
NUP98-218ENST00000530516 HDAC5Q9UQL6 1122 aa4.12□□□□□ -1.75
NUP98-218ENST00000530516 TRIM75PA6NK02 468 aa4.11□□□□□ -1.75
NUP98-218ENST00000530516 TMEM200CA6NKL6 621 aa4.11□□□□□ -1.75
NUP98-218ENST00000530516 AHRRA9YTQ3 701 aa4.11□□□□□ -1.75
NUP98-218ENST00000530516 LEFTY2O00292 366 aa4.11□□□□□ -1.75
NUP98-218ENST00000530516 AKR1B10O60218 316 aa4.11□□□□□ -1.75
NUP98-218ENST00000530516 MTHFD2P13995 350 aa4.11□□□□□ -1.75
NUP98-218ENST00000530516 AGXTP21549 392 aa4.11□□□□□ -1.75
NUP98-218ENST00000530516 CRHR1P34998 444 aa4.11□□□□□ -1.75
NUP98-218ENST00000530516 BMPR1AP36894 532 aa4.11□□□□□ -1.75
NUP98-218ENST00000530516 IARSP41252 1262 aaKnown RBP4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms