RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 KIAA1024Q9UPX6 916 aa23.06■■□□□ 1.28
SMPD1-204ENST00000530395 SF3B1O75533 1304 aaKnown RBP eCLIP23.06■■□□□ 1.28
SMPD1-204ENST00000530395 LAD1O00515 517 aa23.05■■□□□ 1.28
SMPD1-204ENST00000530395 BRD1O95696 1058 aa23.05■■□□□ 1.28
SMPD1-204ENST00000530395 C1RP00736 705 aa23.05■■□□□ 1.28
SMPD1-204ENST00000530395 PTGDRQ13258 359 aa23.05■■□□□ 1.28
SMPD1-204ENST00000530395 RABEP1Q15276 862 aa23.05■■□□□ 1.28
SMPD1-204ENST00000530395 CYP26C1Q6V0L0 522 aa23.05■■□□□ 1.28
SMPD1-204ENST00000530395 APBB1IPQ7Z5R6 666 aaPredicted RBP23.05■■□□□ 1.28
SMPD1-204ENST00000530395 ALYREFQ86V81 257 aaKnown RBP23.05■■□□□ 1.28
SMPD1-204ENST00000530395 HDAC7Q8WUI4 952 aa23.05■■□□□ 1.28
SMPD1-204ENST00000530395 GPR62Q9BZJ7 368 aa23.05■■□□□ 1.28
SMPD1-204ENST00000530395 DDX19AQ9NUU7 478 aaKnown RBP23.05■■□□□ 1.28
SMPD1-204ENST00000530395 SNTG2Q9NY99 539 aa23.05■■□□□ 1.28
SMPD1-204ENST00000530395 TTLL13PA6NNM8 815 aa23.04■■□□□ 1.28
SMPD1-204ENST00000530395 ST18O60284 1047 aa23.04■■□□□ 1.28
SMPD1-204ENST00000530395 RECQL4O94761 1208 aa23.04■■□□□ 1.28
SMPD1-204ENST00000530395 ASGR2P07307 311 aa23.04■■□□□ 1.28
SMPD1-204ENST00000530395 ECM1Q16610 540 aa23.04■■□□□ 1.28
SMPD1-204ENST00000530395 DCAF4L1Q3SXM0 396 aa23.04■■□□□ 1.28
SMPD1-204ENST00000530395 IGSF22Q8N9C0 903 aa23.04■■□□□ 1.28
SMPD1-204ENST00000530395 PRSS33Q8NF86 280 aa23.04■■□□□ 1.28
SMPD1-204ENST00000530395 RIN2Q8WYP3 895 aaPredicted RBP23.04■■□□□ 1.28
SMPD1-204ENST00000530395 B3GALT6Q96L58 329 aa23.04■■□□□ 1.28
SMPD1-204ENST00000530395 FNIP2Q9P278 1114 aa23.04■■□□□ 1.28
SMPD1-204ENST00000530395 THP07101 528 aa23.03■■□□□ 1.28
SMPD1-204ENST00000530395 TOB1P50616 345 aaPredicted RBP23.03■■□□□ 1.28
SMPD1-204ENST00000530395 IER5LQ5T953 404 aa23.03■■□□□ 1.28
SMPD1-204ENST00000530395 KRT79Q5XKE5 535 aa23.03■■□□□ 1.28
SMPD1-204ENST00000530395 STAMQ92783 540 aa23.03■■□□□ 1.28
SMPD1-204ENST00000530395 KIFC3Q9BVG8 833 aa23.03■■□□□ 1.28
SMPD1-204ENST00000530395 RHOBTB2Q9BYZ6 727 aa23.03■■□□□ 1.28
SMPD1-204ENST00000530395 PLEKHA4Q9H4M7 779 aa23.03■■□□□ 1.28
SMPD1-204ENST00000530395 DNM3Q9UQ16 869 aa23.03■■□□□ 1.28
SMPD1-204ENST00000530395 PCDHB6Q9Y5E3 794 aa23.03■■□□□ 1.28
SMPD1-204ENST00000530395 CCDC195A0A1B0GUA6 201 aa23.02■■□□□ 1.28
SMPD1-204ENST00000530395 CASTOR2A6NHX0 329 aa23.02■■□□□ 1.28
SMPD1-204ENST00000530395 VCPP55072 806 aaKnown RBP23.02■■□□□ 1.28
SMPD1-204ENST00000530395 PALB2Q86YC2 1186 aa23.02■■□□□ 1.28
SMPD1-204ENST00000530395 FEZF2Q8TBJ5 459 aa23.02■■□□□ 1.28
SMPD1-204ENST00000530395 RABGGTAQ92696 567 aa23.02■■□□□ 1.28
SMPD1-204ENST00000530395 PTGESO14684 152 aa23.01■■□□□ 1.27
SMPD1-204ENST00000530395 AVPR2P30518 371 aa23.01■■□□□ 1.27
SMPD1-204ENST00000530395 PRPHP41219 470 aa23.01■■□□□ 1.27
SMPD1-204ENST00000530395 MRE11P49959 708 aa23.01■■□□□ 1.27
SMPD1-204ENST00000530395 ATF7IP2Q5U623 682 aa23.01■■□□□ 1.27
SMPD1-204ENST00000530395 EEF1DP3Q658K8 133 aa23.01■■□□□ 1.27
SMPD1-204ENST00000530395 DTHD1Q6ZMT9 781 aa23.01■■□□□ 1.27
SMPD1-204ENST00000530395 PAAF1Q9BRP4 392 aa23.01■■□□□ 1.27
SMPD1-204ENST00000530395 CACNG4Q9UBN1 327 aa23.01■■□□□ 1.27
SMPD1-204ENST00000530395 USP20Q9Y2K6 914 aa23.01■■□□□ 1.27
SMPD1-204ENST00000530395 GDAQ9Y2T3 454 aa23.01■■□□□ 1.27
SMPD1-204ENST00000530395 TRIP11Q15643 1979 aa23■■□□□ 1.27
SMPD1-204ENST00000530395 K7ERI5 159 aa23■■□□□ 1.27
SMPD1-204ENST00000530395 TGM5O43548 720 aa23■■□□□ 1.27
SMPD1-204ENST00000530395 RFPL2O75678 378 aa23■■□□□ 1.27
SMPD1-204ENST00000530395 KIF4AO95239 1232 aa23■■□□□ 1.27
SMPD1-204ENST00000530395 PDGFBP01127 241 aaPredicted RBP23■■□□□ 1.27
SMPD1-204ENST00000530395 EDN1P05305 212 aa23■■□□□ 1.27
SMPD1-204ENST00000530395 SPATA31D3P0C874 917 aa23■■□□□ 1.27
SMPD1-204ENST00000530395 ELAVL2Q12926 359 aaKnown RBP23■■□□□ 1.27
SMPD1-204ENST00000530395 MCTP1Q6DN14 999 aa23■■□□□ 1.27
SMPD1-204ENST00000530395 SPATA31D4Q6ZUB0 917 aa23■■□□□ 1.27
SMPD1-204ENST00000530395 GLYCTKQ8IVS8 523 aa23■■□□□ 1.27
SMPD1-204ENST00000530395 HASPINQ8TF76 798 aa23■■□□□ 1.27
SMPD1-204ENST00000530395 SMG7Q92540 1137 aaKnown RBP23■■□□□ 1.27
SMPD1-204ENST00000530395 TTPALQ9BTX7 342 aa23■■□□□ 1.27
SMPD1-204ENST00000530395 SMOC2Q9H3U7 446 aa23■■□□□ 1.27
SMPD1-204ENST00000530395 PIDD1Q9HB75 910 aa23■■□□□ 1.27
SMPD1-204ENST00000530395 POLD4Q9HCU8 107 aa23■■□□□ 1.27
SMPD1-204ENST00000530395 WDR6Q9NNW5 1121 aaKnown RBP23■■□□□ 1.27
SMPD1-204ENST00000530395 ZDHHC7Q9NXF8 308 aa23■■□□□ 1.27
SMPD1-204ENST00000530395 CLUHO75153 1309 aa23■■□□□ 1.27
SMPD1-204ENST00000530395 PHLPP2Q6ZVD8 1323 aa23■■□□□ 1.27
SMPD1-204ENST00000530395 CCDC169A6NNP5 214 aa22.99■■□□□ 1.27
SMPD1-204ENST00000530395 MYBP10242 640 aa22.99■■□□□ 1.27
SMPD1-204ENST00000530395 NUBP1P53384 320 aa22.99■■□□□ 1.27
SMPD1-204ENST00000530395 DMP1Q13316 513 aaPredicted RBP22.99■■□□□ 1.27
SMPD1-204ENST00000530395 RILPL1Q5EBL4 403 aa22.99■■□□□ 1.27
SMPD1-204ENST00000530395 RTP2Q5QGT7 225 aa22.99■■□□□ 1.27
SMPD1-204ENST00000530395 FAM171A1Q5VUB5 890 aa22.99■■□□□ 1.27
SMPD1-204ENST00000530395 PDXDC1Q6P996 788 aa22.99■■□□□ 1.27
SMPD1-204ENST00000530395 DRC1Q96MC2 740 aa22.99■■□□□ 1.27
SMPD1-204ENST00000530395 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.99■■□□□ 1.27
SMPD1-204ENST00000530395 MYH11P35749 1972 aa22.99■■□□□ 1.27
SMPD1-204ENST00000530395 PP2D1A8MPX8 630 aa22.98■■□□□ 1.27
SMPD1-204ENST00000530395 E9PMD0 336 aa22.98■■□□□ 1.27
SMPD1-204ENST00000530395 RPL17P18621 184 aaKnown RBP22.98■■□□□ 1.27
SMPD1-204ENST00000530395 GBP2P32456 591 aaPredicted RBP22.98■■□□□ 1.27
SMPD1-204ENST00000530395 PEX3P56589 373 aa22.98■■□□□ 1.27
SMPD1-204ENST00000530395 TDGQ13569 410 aa22.98■■□□□ 1.27
SMPD1-204ENST00000530395 NT5DC1Q5TFE4 455 aa22.98■■□□□ 1.27
SMPD1-204ENST00000530395 PRSS55Q6UWB4 352 aaPredicted RBP22.98■■□□□ 1.27
SMPD1-204ENST00000530395 IRF2BPLQ9H1B7 796 aa22.98■■□□□ 1.27
SMPD1-204ENST00000530395 MFSD1Q9H3U5 465 aa22.98■■□□□ 1.27
SMPD1-204ENST00000530395 UPF2Q9HAU5 1272 aaKnown RBP22.98■■□□□ 1.27
SMPD1-204ENST00000530395 IGSF9Q9P2J2 1179 aa22.98■■□□□ 1.27
SMPD1-204ENST00000530395 TNFSF13BQ9Y275 285 aa22.98■■□□□ 1.27
SMPD1-204ENST00000530395 CACNA1HO95180 2353 aa22.98■■□□□ 1.27
SMPD1-204ENST00000530395 HIP1RO75146 1068 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms