RNA–Protein interactions for RNA: ENST00000529898.1

CTR9-205, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, human

TSL 2

Gene CTR9, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTR9-205	ENST00000529898	ABCD1	P33897	745 aa		4.63	□□□□□ -1.67
CTR9-205	ENST00000529898	MAN2A2	P49641	1150 aa		4.63	□□□□□ -1.67
CTR9-205	ENST00000529898	GPR15	P49685	360 aa		4.63	□□□□□ -1.67
CTR9-205	ENST00000529898	TRAF1	Q13077	416 aa		4.63	□□□□□ -1.67
CTR9-205	ENST00000529898	CHAF1A	Q13111	956 aa	Predicted RBP	4.63	□□□□□ -1.67
CTR9-205	ENST00000529898	TMED1	Q13445	227 aa		4.63	□□□□□ -1.67
CTR9-205	ENST00000529898	SPIDR	Q14159	915 aa		4.63	□□□□□ -1.67
CTR9-205	ENST00000529898	RABEP1	Q15276	862 aa		4.63	□□□□□ -1.67
CTR9-205	ENST00000529898	PCBP1	Q15365	356 aa	Known RBP eCLIP	4.63	□□□□□ -1.67
CTR9-205	ENST00000529898	ZSCAN26	Q16670	478 aa		4.63	□□□□□ -1.67
CTR9-205	ENST00000529898	CCDC178	Q5BJE1	867 aa		4.63	□□□□□ -1.67
CTR9-205	ENST00000529898	DALRD3	Q5D0E6	543 aa	Known RBP	4.63	□□□□□ -1.67
CTR9-205	ENST00000529898	MUM1L1	Q5H9M0	696 aa		4.63	□□□□□ -1.67
CTR9-205	ENST00000529898	METTL24	Q5JXM2	366 aa		4.63	□□□□□ -1.67
CTR9-205	ENST00000529898	ZKSCAN2	Q63HK3	967 aa		4.63	□□□□□ -1.67
CTR9-205	ENST00000529898	SUGP1	Q8IWZ8	645 aa	Known RBP	4.63	□□□□□ -1.67
CTR9-205	ENST00000529898	NIM1K	Q8IY84	436 aa		4.63	□□□□□ -1.67
CTR9-205	ENST00000529898	GSPT2	Q8IYD1	628 aa	Known RBP	4.63	□□□□□ -1.67
CTR9-205	ENST00000529898	ULK2	Q8IYT8	1036 aa		4.63	□□□□□ -1.67
CTR9-205	ENST00000529898	AHI1	Q8N157	1196 aa		4.63	□□□□□ -1.67
CTR9-205	ENST00000529898	PPM1K	Q8N3J5	372 aa		4.63	□□□□□ -1.67
CTR9-205	ENST00000529898	FAM184A	Q8NB25	1140 aa		4.63	□□□□□ -1.67
CTR9-205	ENST00000529898	MDGA1	Q8NFP4	955 aa		4.63	□□□□□ -1.67
CTR9-205	ENST00000529898	ZNF483	Q8TF39	744 aa	Predicted RBP	4.63	□□□□□ -1.67
CTR9-205	ENST00000529898	HIST1H2AH	Q96KK5	128 aa		4.63	□□□□□ -1.67
CTR9-205	ENST00000529898	CFAP53	Q96M91	514 aa		4.63	□□□□□ -1.67
CTR9-205	ENST00000529898	CEP89	Q96ST8	783 aa		4.63	□□□□□ -1.67
CTR9-205	ENST00000529898	HIST1H2AJ	Q99878	128 aa		4.63	□□□□□ -1.67
CTR9-205	ENST00000529898	NOL10	Q9BSC4	688 aa	Known RBP	4.63	□□□□□ -1.67
CTR9-205	ENST00000529898	TRIM8	Q9BZR9	551 aa		4.63	□□□□□ -1.67
CTR9-205	ENST00000529898	GRPEL1	Q9HAV7	217 aa		4.63	□□□□□ -1.67
CTR9-205	ENST00000529898	FANCL	Q9NW38	375 aa		4.63	□□□□□ -1.67
CTR9-205	ENST00000529898	STK26	Q9P289	416 aa		4.63	□□□□□ -1.67
CTR9-205	ENST00000529898	SUN2	Q9UH99	717 aa		4.63	□□□□□ -1.67
CTR9-205	ENST00000529898	NOL7	Q9UMY1	257 aa	Known RBP	4.63	□□□□□ -1.67
CTR9-205	ENST00000529898	SUPT6H	Q7KZ85	1726 aa	Known RBP	4.63	□□□□□ -1.67
CTR9-205	ENST00000529898	KDM6B	O15054	1643 aa		4.62	□□□□□ -1.67
CTR9-205	ENST00000529898	GRXCR1	A8MXD5	290 aa		4.62	□□□□□ -1.67
CTR9-205	ENST00000529898	EPB41L2	O43491	1005 aa	Known RBP	4.62	□□□□□ -1.67
CTR9-205	ENST00000529898	NEK4	P51957	841 aa		4.62	□□□□□ -1.67
CTR9-205	ENST00000529898	OCRL	Q01968	901 aa		4.62	□□□□□ -1.67
CTR9-205	ENST00000529898	ELAVL1	Q15717	326 aa	Known RBP	4.62	□□□□□ -1.67
CTR9-205	ENST00000529898	SEPT7	Q16181	437 aa	Known RBP	4.62	□□□□□ -1.67
CTR9-205	ENST00000529898	PDCD2	Q16342	344 aa	Predicted RBP	4.62	□□□□□ -1.67
CTR9-205	ENST00000529898	AMOT	Q4VCS5	1084 aa		4.62	□□□□□ -1.67
CTR9-205	ENST00000529898	DCAF17	Q5H9S7	520 aa	Predicted RBP	4.62	□□□□□ -1.67
CTR9-205	ENST00000529898	PCSK4	Q6UW60	755 aa		4.62	□□□□□ -1.67
CTR9-205	ENST00000529898		Q6ZPA2	131 aa		4.62	□□□□□ -1.67
CTR9-205	ENST00000529898	ZNF662	Q6ZS27	426 aa		4.62	□□□□□ -1.67
CTR9-205	ENST00000529898	ESPNL	Q6ZVH7	1005 aa		4.62	□□□□□ -1.67
CTR9-205	ENST00000529898	MORC4	Q8TE76	937 aa		4.62	□□□□□ -1.67
CTR9-205	ENST00000529898	RSAD2	Q8WXG1	361 aa		4.62	□□□□□ -1.67
CTR9-205	ENST00000529898	LARP4B	Q92615	738 aa	Known RBP	4.62	□□□□□ -1.67
CTR9-205	ENST00000529898	CHFR	Q96EP1	664 aa		4.62	□□□□□ -1.67
CTR9-205	ENST00000529898	ZNF512	Q96ME7	567 aa	Predicted RBP	4.62	□□□□□ -1.67
CTR9-205	ENST00000529898	PDCD2L	Q9BRP1	358 aa		4.62	□□□□□ -1.67
CTR9-205	ENST00000529898	POLR3C	Q9BUI4	534 aa	Predicted RBP	4.62	□□□□□ -1.67
CTR9-205	ENST00000529898	TARS2	Q9BW92	718 aa	Known RBP	4.62	□□□□□ -1.67
CTR9-205	ENST00000529898	WNT8A	Q9H1J5	351 aa		4.62	□□□□□ -1.67
CTR9-205	ENST00000529898	MMRN2	Q9H8L6	949 aa		4.62	□□□□□ -1.67
CTR9-205	ENST00000529898	THG1L	Q9NWX6	298 aa	Known RBP	4.62	□□□□□ -1.67
CTR9-205	ENST00000529898	GPRC5B	Q9NZH0	403 aa		4.62	□□□□□ -1.67
CTR9-205	ENST00000529898	TRPS1	Q9UHF7	1281 aa		4.62	□□□□□ -1.67
CTR9-205	ENST00000529898	TMPRSS11E	Q9UL52	423 aa		4.62	□□□□□ -1.67
CTR9-205	ENST00000529898	NUMBL	Q9Y6R0	609 aa		4.62	□□□□□ -1.67
CTR9-205	ENST00000529898	WDR33	Q9C0J8	1336 aa	Known RBP	4.62	□□□□□ -1.67
CTR9-205	ENST00000529898	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	4.62	□□□□□ -1.67
CTR9-205	ENST00000529898	DENND4B	O75064	1496 aa	Predicted RBP	4.62	□□□□□ -1.67
CTR9-205	ENST00000529898	NCOA2	Q15596	1464 aa		4.62	□□□□□ -1.67
CTR9-205	ENST00000529898	CCDC18	Q5T9S5	1454 aa		4.62	□□□□□ -1.67
CTR9-205	ENST00000529898	ARHGEF11	O15085	1522 aa		4.62	□□□□□ -1.67
CTR9-205	ENST00000529898	DNMBP	Q6XZF7	1577 aa		4.61	□□□□□ -1.67
CTR9-205	ENST00000529898	MARCH6	O60337	910 aa		4.61	□□□□□ -1.67
CTR9-205	ENST00000529898	MFAP3L	O75121	409 aa		4.61	□□□□□ -1.67
CTR9-205	ENST00000529898	REC8	O95072	547 aa		4.61	□□□□□ -1.67
CTR9-205	ENST00000529898	LSS	P48449	732 aa		4.61	□□□□□ -1.67
CTR9-205	ENST00000529898	KPNA1	P52294	538 aa	Predicted RBP	4.61	□□□□□ -1.67
CTR9-205	ENST00000529898	INHBC	P55103	352 aa		4.61	□□□□□ -1.67
CTR9-205	ENST00000529898	CBX1	P83916	185 aa		4.61	□□□□□ -1.67
CTR9-205	ENST00000529898	NEXN	Q0ZGT2	675 aa		4.61	□□□□□ -1.67
CTR9-205	ENST00000529898	CRHR2	Q13324	411 aa		4.61	□□□□□ -1.67
CTR9-205	ENST00000529898	BIRC2	Q13490	618 aa		4.61	□□□□□ -1.67
CTR9-205	ENST00000529898	TERF2	Q15554	542 aa		4.61	□□□□□ -1.67
CTR9-205	ENST00000529898	ZBTB41	Q5SVQ8	909 aa		4.61	□□□□□ -1.67
CTR9-205	ENST00000529898	CCDC30	Q5VVM6	783 aa		4.61	□□□□□ -1.67
CTR9-205	ENST00000529898	RHOU	Q7L0Q8	258 aa		4.61	□□□□□ -1.67
CTR9-205	ENST00000529898	TAS1R1	Q7RTX1	841 aa		4.61	□□□□□ -1.67
CTR9-205	ENST00000529898	LDLRAD3	Q86YD5	345 aa		4.61	□□□□□ -1.67
CTR9-205	ENST00000529898	ANKRD13B	Q86YJ7	626 aa		4.61	□□□□□ -1.67
CTR9-205	ENST00000529898	LYSMD2	Q8IV50	215 aa		4.61	□□□□□ -1.67
CTR9-205	ENST00000529898	FMNL3	Q8IVF7	1028 aa		4.61	□□□□□ -1.67
CTR9-205	ENST00000529898	SLC41A1	Q8IVJ1	513 aa		4.61	□□□□□ -1.67
CTR9-205	ENST00000529898	SAMD3	Q8N6K7	520 aa		4.61	□□□□□ -1.67
CTR9-205	ENST00000529898	CDYL2	Q8N8U2	506 aa		4.61	□□□□□ -1.67
CTR9-205	ENST00000529898	PIK3C3	Q8NEB9	887 aa		4.61	□□□□□ -1.67
CTR9-205	ENST00000529898	MFSD3	Q96ES6	412 aa		4.61	□□□□□ -1.67
CTR9-205	ENST00000529898	RMDN2	Q96LZ7	410 aa		4.61	□□□□□ -1.67
CTR9-205	ENST00000529898	MNT	Q99583	582 aa		4.61	□□□□□ -1.67
CTR9-205	ENST00000529898	PRRX2	Q99811	253 aa		4.61	□□□□□ -1.67
CTR9-205	ENST00000529898	GPR87	Q9BY21	358 aa		4.61	□□□□□ -1.67

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