RNA–Protein interactions for RNA: ENST00000529637.5

USP48-213, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 1 (best) BASIC

Gene USP48, Length 3,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-213ENST00000529637 PPATQ06203 517 aa15.21■□□□□ 0.03
USP48-213ENST00000529637 MIGA2Q7L4E1 593 aa15.21■□□□□ 0.03
USP48-213ENST00000529637 CTNNBL1Q8WYA6 563 aaPredicted RBP15.21■□□□□ 0.03
USP48-213ENST00000529637 ARHGEF2Q92974 986 aaKnown RBP15.21■□□□□ 0.03
USP48-213ENST00000529637 SYT15Q9BQS2 421 aa15.21■□□□□ 0.03
USP48-213ENST00000529637 RXFP1Q9HBX9 757 aa15.21■□□□□ 0.03
USP48-213ENST00000529637 STK24Q9Y6E0 443 aa15.21■□□□□ 0.03
USP48-213ENST00000529637 FERP16591 822 aa15.21■□□□□ 0.03
USP48-213ENST00000529637 GNAZP19086 355 aa15.21■□□□□ 0.03
USP48-213ENST00000529637 JAM2P57087 298 aa15.21■□□□□ 0.03
USP48-213ENST00000529637 FBXO28Q9NVF7 368 aa15.21■□□□□ 0.03
USP48-213ENST00000529637 DNAJC17Q9NVM6 304 aaKnown RBP15.21■□□□□ 0.03
USP48-213ENST00000529637 PRKAG3Q9UGI9 489 aa15.21■□□□□ 0.03
USP48-213ENST00000529637 ARL2BPQ9Y2Y0 163 aa15.21■□□□□ 0.03
USP48-213ENST00000529637 PCDHA3Q9Y5H8 950 aa15.21■□□□□ 0.03
USP48-213ENST00000529637 UBR3Q6ZT12 1888 aa15.21■□□□□ 0.02
USP48-213ENST00000529637 A0A0A6YYK5 440 aaPredicted RBP15.21■□□□□ 0.02
USP48-213ENST00000529637 SLC26A4O43511 780 aa15.21■□□□□ 0.02
USP48-213ENST00000529637 GNAT1P11488 350 aa15.21■□□□□ 0.02
USP48-213ENST00000529637 VCAM1P19320 739 aa15.21■□□□□ 0.02
USP48-213ENST00000529637 CCNG1P51959 295 aa15.21■□□□□ 0.02
USP48-213ENST00000529637 STXBP4Q6ZWJ1 553 aa15.21■□□□□ 0.02
USP48-213ENST00000529637 OTOP1Q7RTM1 612 aa15.21■□□□□ 0.02
USP48-213ENST00000529637 ECHDC2Q86YB7 292 aa15.21■□□□□ 0.02
USP48-213ENST00000529637 ZC3H3Q8IXZ2 948 aaKnown RBP15.21■□□□□ 0.02
USP48-213ENST00000529637 THAP2Q9H0W7 228 aa15.21■□□□□ 0.02
USP48-213ENST00000529637 CNOT7Q9UIV1 285 aaKnown RBP15.21■□□□□ 0.02
USP48-213ENST00000529637 SERPINA10Q9UK55 444 aa15.21■□□□□ 0.02
USP48-213ENST00000529637 ARFGEF1Q9Y6D6 1849 aa15.21■□□□□ 0.02
USP48-213ENST00000529637 TMEM110-MUSTN1A8MSY1 372 aa15.2■□□□□ 0.02
USP48-213ENST00000529637 H0Y3Z8 333 aa15.2■□□□□ 0.02
USP48-213ENST00000529637 SLC16A3O15427 465 aaKnown RBP15.2■□□□□ 0.02
USP48-213ENST00000529637 TNFAIP3P21580 790 aa15.2■□□□□ 0.02
USP48-213ENST00000529637 CIITAP33076 1130 aa15.2■□□□□ 0.02
USP48-213ENST00000529637 LIN7AO14910 233 aaPredicted RBP15.2■□□□□ 0.02
USP48-213ENST00000529637 ARP10275 920 aa15.2■□□□□ 0.02
USP48-213ENST00000529637 FMO5P49326 533 aa15.2■□□□□ 0.02
USP48-213ENST00000529637 PRELPP51888 382 aa15.2■□□□□ 0.02
USP48-213ENST00000529637 SLC30A9Q6PML9 568 aa15.2■□□□□ 0.02
USP48-213ENST00000529637 GOLGA6L10A0A0M3HER8 536 aa15.19■□□□□ 0.02
USP48-213ENST00000529637 SMIM24O75264 130 aa15.19■□□□□ 0.02
USP48-213ENST00000529637 RAD17O75943 681 aa15.19■□□□□ 0.02
USP48-213ENST00000529637 FESP07332 822 aa15.19■□□□□ 0.02
USP48-213ENST00000529637 RWDD2BP57060 319 aa15.19■□□□□ 0.02
USP48-213ENST00000529637 RBBP5Q15291 538 aaKnown RBP15.19■□□□□ 0.02
USP48-213ENST00000529637 CEP55Q53EZ4 464 aa15.19■□□□□ 0.02
USP48-213ENST00000529637 CPNE8Q86YQ8 564 aa15.19■□□□□ 0.02
USP48-213ENST00000529637 SLC30A5Q8TAD4 765 aa15.19■□□□□ 0.02
USP48-213ENST00000529637 IFT74Q96LB3 600 aa15.19■□□□□ 0.02
USP48-213ENST00000529637 HSD17B14Q9BPX1 270 aa15.19■□□□□ 0.02
USP48-213ENST00000529637 CARD9Q9H257 536 aa15.19■□□□□ 0.02
USP48-213ENST00000529637 PAPOLBQ9NRJ5 636 aaKnown RBP15.19■□□□□ 0.02
USP48-213ENST00000529637 OLFML3Q9NRN5 406 aa15.19■□□□□ 0.02
USP48-213ENST00000529637 IGLV3-22A0A075B6J6 115 aa15.19■□□□□ 0.02
USP48-213ENST00000529637 FAM187AA6NFU0 413 aa15.19■□□□□ 0.02
USP48-213ENST00000529637 K7ENM7 598 aa15.19■□□□□ 0.02
USP48-213ENST00000529637 SOX5P35711 763 aa15.19■□□□□ 0.02
USP48-213ENST00000529637 RAD23BP54727 409 aa15.19■□□□□ 0.02
USP48-213ENST00000529637 MYL7Q01449 175 aa15.19■□□□□ 0.02
USP48-213ENST00000529637 CBWD6Q4V339 395 aa15.19■□□□□ 0.02
USP48-213ENST00000529637 CBWD3Q5JTY5 395 aa15.19■□□□□ 0.02
USP48-213ENST00000529637 CBWD5Q5RIA9 395 aa15.19■□□□□ 0.02
USP48-213ENST00000529637 ARMC3Q5W041 872 aa15.19■□□□□ 0.02
USP48-213ENST00000529637 FAM47EQ6ZV65 393 aa15.19■□□□□ 0.02
USP48-213ENST00000529637 C1orf186Q6ZWK4 172 aa15.19■□□□□ 0.02
USP48-213ENST00000529637 TAOK1Q7L7X3 1001 aa15.19■□□□□ 0.02
USP48-213ENST00000529637 NACC1Q96RE7 527 aa15.19■□□□□ 0.02
USP48-213ENST00000529637 LBHD1Q9BQE6 289 aaPredicted RBP15.19■□□□□ 0.02
USP48-213ENST00000529637 LXNQ9BS40 222 aa15.19■□□□□ 0.02
USP48-213ENST00000529637 HOMER2Q9NSB8 354 aa15.19■□□□□ 0.02
USP48-213ENST00000529637 SCAF8Q9UPN6 1271 aaKnown RBP15.19■□□□□ 0.02
USP48-213ENST00000529637 THSD7AQ9UPZ6 1657 aa15.19■□□□□ 0.02
USP48-213ENST00000529637 HIP1RO75146 1068 aa15.19■□□□□ 0.02
USP48-213ENST00000529637 PEX11AO75192 247 aa15.19■□□□□ 0.02
USP48-213ENST00000529637 CCNB1P14635 433 aa15.19■□□□□ 0.02
USP48-213ENST00000529637 PAPOLAP51003 745 aaKnown RBP15.19■□□□□ 0.02
USP48-213ENST00000529637 NPEPPSP55786 919 aa15.19■□□□□ 0.02
USP48-213ENST00000529637 CYP4X1Q8N118 509 aa15.19■□□□□ 0.02
USP48-213ENST00000529637 CPXCR1Q8N123 301 aa15.19■□□□□ 0.02
USP48-213ENST00000529637 GBP7Q8N8V2 638 aaPredicted RBP15.19■□□□□ 0.02
USP48-213ENST00000529637 RFFLQ8WZ73 363 aa15.19■□□□□ 0.02
USP48-213ENST00000529637 TSC22D3Q99576 134 aa15.19■□□□□ 0.02
USP48-213ENST00000529637 EHMT1Q9H9B1 1298 aa15.19■□□□□ 0.02
USP48-213ENST00000529637 TBK1Q9UHD2 729 aa15.19■□□□□ 0.02
USP48-213ENST00000529637 ONECUT3O60422 494 aaPredicted RBP15.18■□□□□ 0.02
USP48-213ENST00000529637 UNC5CO95185 931 aa15.18■□□□□ 0.02
USP48-213ENST00000529637 TARSP26639 723 aaKnown RBP15.18■□□□□ 0.02
USP48-213ENST00000529637 PCK1P35558 622 aa15.18■□□□□ 0.02
USP48-213ENST00000529637 DRG2P55039 364 aaKnown RBP15.18■□□□□ 0.02
USP48-213ENST00000529637 DHX34Q14147 1143 aaKnown RBP15.18■□□□□ 0.02
USP48-213ENST00000529637 CCDC137Q6PK04 289 aaKnown RBP15.18■□□□□ 0.02
USP48-213ENST00000529637 SUPT20HQ8NEM7 779 aa15.18■□□□□ 0.02
USP48-213ENST00000529637 TGS1Q96RS0 853 aaKnown RBP15.18■□□□□ 0.02
USP48-213ENST00000529637 INTS2Q9H0H0 1204 aaKnown RBP15.18■□□□□ 0.02
USP48-213ENST00000529637 UNC45AQ9H3U1 944 aa15.18■□□□□ 0.02
USP48-213ENST00000529637 TUFT1Q9NNX1 390 aa15.18■□□□□ 0.02
USP48-213ENST00000529637 AGPAT3Q9NRZ7 376 aa15.18■□□□□ 0.02
USP48-213ENST00000529637 CPSF2Q9P2I0 782 aaKnown RBP15.18■□□□□ 0.02
USP48-213ENST00000529637 LRRC42Q9Y546 428 aa15.18■□□□□ 0.02
USP48-213ENST00000529637 FOCADQ5VW36 1801 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms