RNA–Protein interactions for RNA: ENST00000529469.1

SOX6-212, Transcript of SRY-box 6, humanhuman

TSL 4

Gene SOX6, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-212ENST00000529469 PDZD4Q76G19 769 aaPredicted RBP5.75□□□□□ -1.49
SOX6-212ENST00000529469 ANKRD35Q8N283 1001 aa5.75□□□□□ -1.49
SOX6-212ENST00000529469 MIER2Q8N344 545 aa5.75□□□□□ -1.49
SOX6-212ENST00000529469 MDGA1Q8NFP4 955 aa5.75□□□□□ -1.49
SOX6-212ENST00000529469 CCHCR1Q8TD31 782 aa5.75□□□□□ -1.49
SOX6-212ENST00000529469 STON2Q8WXE9 905 aa5.75□□□□□ -1.49
SOX6-212ENST00000529469 ST8SIA2Q92186 375 aa5.75□□□□□ -1.49
SOX6-212ENST00000529469 HDAC10Q969S8 669 aa5.75□□□□□ -1.49
SOX6-212ENST00000529469 HSPBAP1Q96EW2 488 aa5.75□□□□□ -1.49
SOX6-212ENST00000529469 CPPED1Q9BRF8 314 aaPredicted RBP5.75□□□□□ -1.49
SOX6-212ENST00000529469 C1QTNF3Q9BXJ4 246 aa5.75□□□□□ -1.49
SOX6-212ENST00000529469 SENP6Q9GZR1 1112 aaPredicted RBP5.75□□□□□ -1.49
SOX6-212ENST00000529469 CSRNP2Q9H175 543 aa5.75□□□□□ -1.49
SOX6-212ENST00000529469 ZIM2Q9NZV7 527 aa5.75□□□□□ -1.49
SOX6-212ENST00000529469 KLHL42Q9P2K6 505 aa5.75□□□□□ -1.49
SOX6-212ENST00000529469 GIT1Q9Y2X7 761 aa5.75□□□□□ -1.49
SOX6-212ENST00000529469 PCDHA13Q9Y5I0 950 aa5.75□□□□□ -1.49
SOX6-212ENST00000529469 NCANO14594 1321 aa5.74□□□□□ -1.49
SOX6-212ENST00000529469 KRTAP4-8A0A0G2JLE6 195 aa5.74□□□□□ -1.49
SOX6-212ENST00000529469 GPR32O75388 356 aa5.74□□□□□ -1.49
SOX6-212ENST00000529469 IPO13O94829 963 aaKnown RBP5.74□□□□□ -1.49
SOX6-212ENST00000529469 HK1P19367 917 aa5.74□□□□□ -1.49
SOX6-212ENST00000529469 HIBADHP31937 336 aaKnown RBP5.74□□□□□ -1.49
SOX6-212ENST00000529469 ALDH1A3P47895 512 aa5.74□□□□□ -1.49
SOX6-212ENST00000529469 FXR1P51114 621 aaKnown RBP eCLIP5.74□□□□□ -1.49
SOX6-212ENST00000529469 TARDBPQ13148 414 aaKnown RBP eCLIP5.74□□□□□ -1.49
SOX6-212ENST00000529469 PRKD1Q15139 912 aaPredicted RBP5.74□□□□□ -1.49
SOX6-212ENST00000529469 CSRP2Q16527 193 aa5.74□□□□□ -1.49
SOX6-212ENST00000529469 SPDYAQ5MJ70 313 aa5.74□□□□□ -1.49
SOX6-212ENST00000529469 AFMIDQ63HM1 303 aa5.74□□□□□ -1.49
SOX6-212ENST00000529469 DOK3Q7L591 496 aa5.74□□□□□ -1.49
SOX6-212ENST00000529469 CATIPQ7Z7H3 387 aa5.74□□□□□ -1.49
SOX6-212ENST00000529469 OR52N2Q8NGI0 321 aa5.74□□□□□ -1.49
SOX6-212ENST00000529469 SLC35B2Q8TB61 432 aa5.74□□□□□ -1.49
SOX6-212ENST00000529469 ATXN2LQ8WWM7 1075 aaKnown RBP5.74□□□□□ -1.49
SOX6-212ENST00000529469 PGBD4Q96DM1 585 aa5.74□□□□□ -1.49
SOX6-212ENST00000529469 PUS7Q96PZ0 661 aaKnown RBP5.74□□□□□ -1.49
SOX6-212ENST00000529469 CDH19Q9H159 772 aa5.74□□□□□ -1.49
SOX6-212ENST00000529469 ZNF180Q9UJW8 692 aa5.74□□□□□ -1.49
SOX6-212ENST00000529469 G3BP2Q9UN86 482 aaKnown RBP5.74□□□□□ -1.49
SOX6-212ENST00000529469 ACTL7AQ9Y615 435 aa5.74□□□□□ -1.49
SOX6-212ENST00000529469 EID1Q9Y6B2 187 aa5.74□□□□□ -1.49
SOX6-212ENST00000529469 E2F8A0AVK6 867 aa5.73□□□□□ -1.49
SOX6-212ENST00000529469 KLRG2A4D1S0 409 aaPredicted RBP5.73□□□□□ -1.49
SOX6-212ENST00000529469 CXorf49A8MYA2 514 aaPredicted RBP5.73□□□□□ -1.49
SOX6-212ENST00000529469 B5MCH6 92 aa5.73□□□□□ -1.49
SOX6-212ENST00000529469 PRRG2O14669 202 aa5.73□□□□□ -1.49
SOX6-212ENST00000529469 MFAP3LO75121 409 aa5.73□□□□□ -1.49
SOX6-212ENST00000529469 ZSCAN20P17040 1043 aaPredicted RBP5.73□□□□□ -1.49
SOX6-212ENST00000529469 BUD31P41223 144 aaPredicted RBP5.73□□□□□ -1.49
SOX6-212ENST00000529469 SCNN1GP51170 649 aa5.73□□□□□ -1.49
SOX6-212ENST00000529469 SP140Q13342 867 aa5.73□□□□□ -1.49
SOX6-212ENST00000529469 MTM1Q13496 603 aa5.73□□□□□ -1.49
SOX6-212ENST00000529469 LRRC41Q15345 812 aa5.73□□□□□ -1.49
SOX6-212ENST00000529469 FAM47AQ5JRC9 791 aa5.73□□□□□ -1.49
SOX6-212ENST00000529469 GPRIN1Q7Z2K8 1008 aa5.73□□□□□ -1.49
SOX6-212ENST00000529469 FAM83AQ86UY5 434 aa5.73□□□□□ -1.49
SOX6-212ENST00000529469 RNF169Q8NCN4 708 aa5.73□□□□□ -1.49
SOX6-212ENST00000529469 JPH3Q8WXH2 748 aaPredicted RBP5.73□□□□□ -1.49
SOX6-212ENST00000529469 MANSC1Q9H8J5 431 aa5.73□□□□□ -1.49
SOX6-212ENST00000529469 TDP1Q9NUW8 608 aa5.73□□□□□ -1.49
SOX6-212ENST00000529469 TMEM140Q9NV12 185 aa5.73□□□□□ -1.49
SOX6-212ENST00000529469 RUVBL1Q9Y265 456 aaKnown RBP5.73□□□□□ -1.49
SOX6-212ENST00000529469 TSC22D4Q9Y3Q8 395 aa5.73□□□□□ -1.49
SOX6-212ENST00000529469 SCGB1D2O95969 90 aa5.72□□□□□ -1.49
SOX6-212ENST00000529469 CT47B1P0C2W7 299 aaPredicted RBP5.72□□□□□ -1.49
SOX6-212ENST00000529469 RAP2AP10114 183 aa5.72□□□□□ -1.49
SOX6-212ENST00000529469 IL2RBP14784 551 aa5.72□□□□□ -1.49
SOX6-212ENST00000529469 DDCP20711 480 aa5.72□□□□□ -1.49
SOX6-212ENST00000529469 ACRV1P26436 265 aa5.72□□□□□ -1.49
SOX6-212ENST00000529469 ATP8B2P98198 1209 aa5.72□□□□□ -1.49
SOX6-212ENST00000529469 NFE2Q16621 373 aaPredicted RBP5.72□□□□□ -1.49
SOX6-212ENST00000529469 DCAF17Q5H9S7 520 aaPredicted RBP5.72□□□□□ -1.49
SOX6-212ENST00000529469 RRP12Q5JTH9 1297 aaKnown RBP5.72□□□□□ -1.49
SOX6-212ENST00000529469 HTR3DQ70Z44 454 aa5.72□□□□□ -1.49
SOX6-212ENST00000529469 CASKIN2Q8WXE0 1202 aa5.72□□□□□ -1.49
SOX6-212ENST00000529469 CYFIP2Q96F07 1278 aa5.72□□□□□ -1.49
SOX6-212ENST00000529469 CDK5RAP1Q96SZ6 601 aaKnown RBP5.72□□□□□ -1.49
SOX6-212ENST00000529469 NUP88Q99567 741 aaPredicted RBP5.72□□□□□ -1.49
SOX6-212ENST00000529469 GPR87Q9BY21 358 aa5.72□□□□□ -1.49
SOX6-212ENST00000529469 GTPBP4Q9BZE4 634 aaKnown RBP5.72□□□□□ -1.49
SOX6-212ENST00000529469 HDAC5Q9UQL6 1122 aa5.72□□□□□ -1.49
SOX6-212ENST00000529469 ANKRD6Q9Y2G4 727 aa5.72□□□□□ -1.49
SOX6-212ENST00000529469 PCDHB1Q9Y5F3 818 aa5.72□□□□□ -1.49
SOX6-212ENST00000529469 MYBBP1AQ9BQG0 1328 aaKnown RBP5.72□□□□□ -1.49
SOX6-212ENST00000529469 TBKBP1A7MCY6 615 aa5.71□□□□□ -1.5
SOX6-212ENST00000529469 PRR5-ARHGAP8B1AHC4 643 aa5.71□□□□□ -1.5
SOX6-212ENST00000529469 CYP27B1O15528 508 aa5.71□□□□□ -1.5
SOX6-212ENST00000529469 SGTAO43765 313 aa5.71□□□□□ -1.5
SOX6-212ENST00000529469 HSP90B1P14625 803 aaKnown RBP5.71□□□□□ -1.5
SOX6-212ENST00000529469 PDCP20941 246 aa5.71□□□□□ -1.5
SOX6-212ENST00000529469 MAN2A2P49641 1150 aa5.71□□□□□ -1.5
SOX6-212ENST00000529469 CDC42EP1Q00587 391 aa5.71□□□□□ -1.5
SOX6-212ENST00000529469 CRHR2Q13324 411 aa5.71□□□□□ -1.5
SOX6-212ENST00000529469 RRP1BQ14684 758 aaKnown RBP5.71□□□□□ -1.5
SOX6-212ENST00000529469 BMT2Q1RMZ1 405 aa5.71□□□□□ -1.5
SOX6-212ENST00000529469 TPH2Q8IWU9 490 aa5.71□□□□□ -1.5
SOX6-212ENST00000529469 DCBLD1Q8N8Z6 715 aa5.71□□□□□ -1.5
SOX6-212ENST00000529469 IFI44Q8TCB0 444 aa5.71□□□□□ -1.5
SOX6-212ENST00000529469 NSUN6Q8TEA1 469 aaKnown RBP5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms