RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 ZNF277Q9NRM2 450 aaPredicted RBP6.34□□□□□ -1.39
CSDE1-212ENST00000529046 ZFR2Q9UPR6 939 aaKnown RBP6.34□□□□□ -1.39
CSDE1-212ENST00000529046 VWA7Q9Y334 891 aa6.34□□□□□ -1.39
CSDE1-212ENST00000529046 C1orf167Q5SNV9 1468 aa6.34□□□□□ -1.4
CSDE1-212ENST00000529046 PNPLA6Q8IY17 1366 aa6.33□□□□□ -1.4
CSDE1-212ENST00000529046 ANKRD30BQ9BXX2 1392 aa6.33□□□□□ -1.4
CSDE1-212ENST00000529046 NHSL1Q5SYE7 1610 aa6.33□□□□□ -1.4
CSDE1-212ENST00000529046 CDC14BO60729 498 aa6.33□□□□□ -1.4
CSDE1-212ENST00000529046 RBP3P10745 1247 aa6.33□□□□□ -1.4
CSDE1-212ENST00000529046 CR2P20023 1033 aa6.33□□□□□ -1.4
CSDE1-212ENST00000529046 MTNR1BP49286 362 aa6.33□□□□□ -1.4
CSDE1-212ENST00000529046 MRPS9P82933 396 aaKnown RBP6.33□□□□□ -1.4
CSDE1-212ENST00000529046 NFYCQ13952 458 aa6.33□□□□□ -1.4
CSDE1-212ENST00000529046 TRIM25Q14258 630 aaKnown RBP6.33□□□□□ -1.4
CSDE1-212ENST00000529046 PCOLCEQ15113 449 aa6.33□□□□□ -1.4
CSDE1-212ENST00000529046 DGKDQ16760 1214 aa6.33□□□□□ -1.4
CSDE1-212ENST00000529046 MEX3CQ5U5Q3 659 aaKnown RBP6.33□□□□□ -1.4
CSDE1-212ENST00000529046 USP30Q70CQ3 517 aa6.33□□□□□ -1.4
CSDE1-212ENST00000529046 C1orf162Q8NEQ5 155 aaPredicted RBP6.33□□□□□ -1.4
CSDE1-212ENST00000529046 SH3RF3Q8TEJ3 882 aaPredicted RBP6.33□□□□□ -1.4
CSDE1-212ENST00000529046 DPYSL5Q9BPU6 564 aa6.33□□□□□ -1.4
CSDE1-212ENST00000529046 OSBPL6Q9BZF3 934 aa6.33□□□□□ -1.4
CSDE1-212ENST00000529046 C12orf65Q9H3J6 166 aaKnown RBP6.33□□□□□ -1.4
CSDE1-212ENST00000529046 PUF60Q9UHX1 559 aaKnown RBP6.33□□□□□ -1.4
CSDE1-212ENST00000529046 PRSS50Q9UI38 385 aa6.33□□□□□ -1.4
CSDE1-212ENST00000529046 KCNG1Q9UIX4 513 aa6.33□□□□□ -1.4
CSDE1-212ENST00000529046 KIF1BO60333 1816 aa6.33□□□□□ -1.4
CSDE1-212ENST00000529046 TECPR2O15040 1411 aa6.33□□□□□ -1.4
CSDE1-212ENST00000529046 ABCC11Q96J66 1382 aa6.32□□□□□ -1.4
CSDE1-212ENST00000529046 TNKSO95271 1327 aa6.32□□□□□ -1.4
CSDE1-212ENST00000529046 MAFGO15525 162 aa6.32□□□□□ -1.4
CSDE1-212ENST00000529046 MRE11P49959 708 aa6.32□□□□□ -1.4
CSDE1-212ENST00000529046 STAT5BP51692 787 aa6.32□□□□□ -1.4
CSDE1-212ENST00000529046 TBR1Q16650 682 aa6.32□□□□□ -1.4
CSDE1-212ENST00000529046 PLEKHG6Q3KR16 790 aa6.32□□□□□ -1.4
CSDE1-212ENST00000529046 CDYL2Q8N8U2 506 aa6.32□□□□□ -1.4
CSDE1-212ENST00000529046 SSH1Q8WYL5 1049 aa6.32□□□□□ -1.4
CSDE1-212ENST00000529046 FERMT2Q96AC1 680 aa6.32□□□□□ -1.4
CSDE1-212ENST00000529046 RAX2Q96IS3 184 aa6.32□□□□□ -1.4
CSDE1-212ENST00000529046 ANO3Q9BYT9 981 aa6.32□□□□□ -1.4
CSDE1-212ENST00000529046 OR10A2Q9H208 303 aa6.32□□□□□ -1.4
CSDE1-212ENST00000529046 CCM2LQ9NUG4 571 aaPredicted RBP6.32□□□□□ -1.4
CSDE1-212ENST00000529046 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.32□□□□□ -1.4
CSDE1-212ENST00000529046 PCDHB6Q9Y5E3 794 aa6.32□□□□□ -1.4
CSDE1-212ENST00000529046 SPATA31E1Q6ZUB1 1445 aa6.32□□□□□ -1.4
CSDE1-212ENST00000529046 SETD1AO15047 1707 aaKnown RBP6.31□□□□□ -1.4
CSDE1-212ENST00000529046 GOLGA8AA7E2F4 631 aa6.31□□□□□ -1.4
CSDE1-212ENST00000529046 GOLGA8BA8MQT2 603 aa6.31□□□□□ -1.4
CSDE1-212ENST00000529046 CLEC2LP0C7M8 214 aa6.31□□□□□ -1.4
CSDE1-212ENST00000529046 IARSP41252 1262 aaKnown RBP6.31□□□□□ -1.4
CSDE1-212ENST00000529046 SCAND1P57086 179 aa6.31□□□□□ -1.4
CSDE1-212ENST00000529046 RBM6P78332 1123 aaKnown RBP6.31□□□□□ -1.4
CSDE1-212ENST00000529046 ITKQ08881 620 aa6.31□□□□□ -1.4
CSDE1-212ENST00000529046 R3HDM1Q15032 1099 aaKnown RBP6.31□□□□□ -1.4
CSDE1-212ENST00000529046 UGT8Q16880 541 aa6.31□□□□□ -1.4
CSDE1-212ENST00000529046 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.31□□□□□ -1.4
CSDE1-212ENST00000529046 CT83Q5H943 113 aa6.31□□□□□ -1.4
CSDE1-212ENST00000529046 SPRED1Q7Z699 444 aa6.31□□□□□ -1.4
CSDE1-212ENST00000529046 FUKQ8N0W3 1084 aa6.31□□□□□ -1.4
CSDE1-212ENST00000529046 EAF2Q96CJ1 260 aaPredicted RBP6.31□□□□□ -1.4
CSDE1-212ENST00000529046 MPHOSPH9Q99550 1183 aa6.31□□□□□ -1.4
CSDE1-212ENST00000529046 FDXACB1Q9BRP7 624 aaPredicted RBP6.31□□□□□ -1.4
CSDE1-212ENST00000529046 KCTD10Q9H3F6 313 aa6.31□□□□□ -1.4
CSDE1-212ENST00000529046 POLR3BQ9NW08 1133 aaPredicted RBP6.31□□□□□ -1.4
CSDE1-212ENST00000529046 FAM184BQ9ULE4 1060 aa6.31□□□□□ -1.4
CSDE1-212ENST00000529046 CTDP1Q9Y5B0 961 aaPredicted RBP6.31□□□□□ -1.4
CSDE1-212ENST00000529046 CCDC144AA2RUR9 1427 aa6.31□□□□□ -1.4
CSDE1-212ENST00000529046 LRPPRCP42704 1394 aaKnown RBP6.31□□□□□ -1.4
CSDE1-212ENST00000529046 AFF2P51816 1311 aa6.3□□□□□ -1.4
CSDE1-212ENST00000529046 WASHC2AQ641Q2 1341 aa6.3□□□□□ -1.4
CSDE1-212ENST00000529046 NPHP3Q7Z494 1330 aa6.3□□□□□ -1.4
CSDE1-212ENST00000529046 ST20-MTHFSA0A0A6YYL1 179 aa6.3□□□□□ -1.4
CSDE1-212ENST00000529046 MATN2O00339 956 aa6.3□□□□□ -1.4
CSDE1-212ENST00000529046 H2AFYO75367 372 aaKnown RBP6.3□□□□□ -1.4
CSDE1-212ENST00000529046 RAD17O75943 681 aa6.3□□□□□ -1.4
CSDE1-212ENST00000529046 COMTP21964 271 aa6.3□□□□□ -1.4
CSDE1-212ENST00000529046 CCDC62Q6P9F0 684 aa6.3□□□□□ -1.4
CSDE1-212ENST00000529046 OR14C36Q8NHC7 312 aa6.3□□□□□ -1.4
CSDE1-212ENST00000529046 CFHR4Q92496 578 aa6.3□□□□□ -1.4
CSDE1-212ENST00000529046 MTMR8Q96EF0 704 aa6.3□□□□□ -1.4
CSDE1-212ENST00000529046 FUBP3Q96I24 572 aaKnown RBP eCLIP6.3□□□□□ -1.4
CSDE1-212ENST00000529046 DYDC2Q96IM9 177 aa6.3□□□□□ -1.4
CSDE1-212ENST00000529046 OR14A2Q96R54 314 aa6.3□□□□□ -1.4
CSDE1-212ENST00000529046 TMPRSS5Q9H3S3 457 aa6.3□□□□□ -1.4
CSDE1-212ENST00000529046 MSL2Q9HCI7 577 aa6.3□□□□□ -1.4
CSDE1-212ENST00000529046 TCF7L1Q9HCS4 588 aa6.3□□□□□ -1.4
CSDE1-212ENST00000529046 SAE1Q9UBE0 346 aaPredicted RBP6.3□□□□□ -1.4
CSDE1-212ENST00000529046 CDY2AQ9Y6F7 541 aa6.3□□□□□ -1.4
CSDE1-212ENST00000529046 SLC30A1Q9Y6M5 507 aa6.3□□□□□ -1.4
CSDE1-212ENST00000529046 CDC42BPGQ6DT37 1551 aa6.3□□□□□ -1.4
CSDE1-212ENST00000529046 NALCNQ8IZF0 1738 aa6.3□□□□□ -1.4
CSDE1-212ENST00000529046 ADGRF5Q8IZF2 1346 aa6.29□□□□□ -1.4
CSDE1-212ENST00000529046 PPLO60437 1756 aa6.29□□□□□ -1.4
CSDE1-212ENST00000529046 SHTN1A0MZ66 631 aa6.29□□□□□ -1.4
CSDE1-212ENST00000529046 PMS2P1A4D2B8 440 aa6.29□□□□□ -1.4
CSDE1-212ENST00000529046 PCDHGA12O60330 932 aa6.29□□□□□ -1.4
CSDE1-212ENST00000529046 PIK3C2GO75747 1445 aa6.29□□□□□ -1.4
CSDE1-212ENST00000529046 PCDH8O95206 1070 aa6.29□□□□□ -1.4
CSDE1-212ENST00000529046 APOL3O95236 402 aa6.29□□□□□ -1.4
CSDE1-212ENST00000529046 CFBP00751 764 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms