RNA–Protein interactions for RNA: ENST00000528563.5

HIF3A-211, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2

Gene HIF3A, Length 1,486 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-211ENST00000528563 LTBRP36941 435 aa18.45■□□□□ 0.54
HIF3A-211ENST00000528563 GRIK3Q13003 919 aa18.45■□□□□ 0.54
HIF3A-211ENST00000528563 ADAM15Q13444 863 aa18.45■□□□□ 0.54
HIF3A-211ENST00000528563 NAB2Q15742 525 aa18.45■□□□□ 0.54
HIF3A-211ENST00000528563 AAK1Q2M2I8 961 aa18.45■□□□□ 0.54
HIF3A-211ENST00000528563 ALKAL1Q6UXT8 129 aa18.45■□□□□ 0.54
HIF3A-211ENST00000528563 TMC7Q7Z402 723 aa18.45■□□□□ 0.54
HIF3A-211ENST00000528563 CEP120Q8N960 986 aa18.45■□□□□ 0.54
HIF3A-211ENST00000528563 MRPL43Q8N983 215 aaKnown RBP18.45■□□□□ 0.54
HIF3A-211ENST00000528563 PPP2R3CQ969Q6 453 aa18.45■□□□□ 0.54
HIF3A-211ENST00000528563 TCF25Q9BQ70 676 aa18.45■□□□□ 0.54
HIF3A-211ENST00000528563 VN1R3Q9BXE9 311 aa18.45■□□□□ 0.54
HIF3A-211ENST00000528563 SEL1LQ9UBV2 794 aa18.45■□□□□ 0.54
HIF3A-211ENST00000528563 FRMD3A2A2Y4 597 aa18.44■□□□□ 0.54
HIF3A-211ENST00000528563 K7ENM7 598 aa18.44■□□□□ 0.54
HIF3A-211ENST00000528563 POLR2DO15514 142 aaKnown RBP18.44■□□□□ 0.54
HIF3A-211ENST00000528563 EFEMP2O95967 443 aa18.44■□□□□ 0.54
HIF3A-211ENST00000528563 PIGRP01833 764 aa18.44■□□□□ 0.54
HIF3A-211ENST00000528563 GAP43P17677 238 aa18.44■□□□□ 0.54
HIF3A-211ENST00000528563 ABCD1P33897 745 aa18.44■□□□□ 0.54
HIF3A-211ENST00000528563 MCL1Q07820 350 aa18.44■□□□□ 0.54
HIF3A-211ENST00000528563 ZC2HC1CQ53FD0 456 aaPredicted RBP18.44■□□□□ 0.54
HIF3A-211ENST00000528563 XKR4Q5GH76 650 aa18.44■□□□□ 0.54
HIF3A-211ENST00000528563 ADALQ6DHV7 355 aa18.44■□□□□ 0.54
HIF3A-211ENST00000528563 SFR1Q86XK3 245 aa18.44■□□□□ 0.54
HIF3A-211ENST00000528563 VPS52Q8N1B4 723 aa18.44■□□□□ 0.54
HIF3A-211ENST00000528563 STAMQ92783 540 aa18.44■□□□□ 0.54
HIF3A-211ENST00000528563 DHX58Q96C10 678 aa18.44■□□□□ 0.54
HIF3A-211ENST00000528563 SPATA32Q96LK8 384 aa18.44■□□□□ 0.54
HIF3A-211ENST00000528563 RPS6KC1Q96S38 1066 aa18.44■□□□□ 0.54
HIF3A-211ENST00000528563 STRA6Q9BX79 667 aa18.44■□□□□ 0.54
HIF3A-211ENST00000528563 HAPLN2Q9GZV7 340 aa18.44■□□□□ 0.54
HIF3A-211ENST00000528563 TNMDQ9H2S6 317 aa18.44■□□□□ 0.54
HIF3A-211ENST00000528563 IGFLR1Q9H665 355 aa18.44■□□□□ 0.54
HIF3A-211ENST00000528563 TLE6Q9H808 572 aa18.44■□□□□ 0.54
HIF3A-211ENST00000528563 HIDE1A8MVS5 230 aa18.43■□□□□ 0.54
HIF3A-211ENST00000528563 CLDN3O15551 220 aa18.43■□□□□ 0.54
HIF3A-211ENST00000528563 THP07101 528 aa18.43■□□□□ 0.54
HIF3A-211ENST00000528563 BMP1P13497 986 aa18.43■□□□□ 0.54
HIF3A-211ENST00000528563 CMA1P23946 247 aa18.43■□□□□ 0.54
HIF3A-211ENST00000528563 OR1G1P47890 313 aa18.43■□□□□ 0.54
HIF3A-211ENST00000528563 NRIP1P48552 1158 aa18.43■□□□□ 0.54
HIF3A-211ENST00000528563 TJAP1Q5JTD0 557 aa18.43■□□□□ 0.54
HIF3A-211ENST00000528563 CNNM4Q6P4Q7 775 aa18.43■□□□□ 0.54
HIF3A-211ENST00000528563 RBM23Q86U06 439 aaKnown RBP18.43■□□□□ 0.54
HIF3A-211ENST00000528563 EFHBQ8N7U6 833 aa18.43■□□□□ 0.54
HIF3A-211ENST00000528563 CCDC94Q9BW85 323 aaPredicted RBP18.43■□□□□ 0.54
HIF3A-211ENST00000528563 LRRC27Q9C0I9 530 aa18.43■□□□□ 0.54
HIF3A-211ENST00000528563 SCAND2PQ9GZW5 306 aaPredicted RBP18.43■□□□□ 0.54
HIF3A-211ENST00000528563 ENTPD7Q9NQZ7 604 aa18.43■□□□□ 0.54
HIF3A-211ENST00000528563 MARCH5Q9NX47 278 aa18.43■□□□□ 0.54
HIF3A-211ENST00000528563 FAM13BQ9NYF5 915 aa18.43■□□□□ 0.54
HIF3A-211ENST00000528563 KCNH3Q9ULD8 1083 aa18.43■□□□□ 0.54
HIF3A-211ENST00000528563 TDRD15B5MCY1 1934 aaKnown RBP18.42■□□□□ 0.54
HIF3A-211ENST00000528563 BDP1A6H8Y1 2624 aa18.42■□□□□ 0.54
HIF3A-211ENST00000528563 C2orf71A6NGG8 1288 aa18.42■□□□□ 0.54
HIF3A-211ENST00000528563 PER2O15055 1255 aa18.42■□□□□ 0.54
HIF3A-211ENST00000528563 NR1I2O75469 434 aa18.42■□□□□ 0.54
HIF3A-211ENST00000528563 PPP1R37O75864 691 aa18.42■□□□□ 0.54
HIF3A-211ENST00000528563 CXCL14O95715 111 aa18.42■□□□□ 0.54
HIF3A-211ENST00000528563 IDEP14735 1019 aa18.42■□□□□ 0.54
HIF3A-211ENST00000528563 KCNA5P22460 613 aa18.42■□□□□ 0.54
HIF3A-211ENST00000528563 OSTNP61366 133 aa18.42■□□□□ 0.54
HIF3A-211ENST00000528563 NUCB2P80303 420 aa18.42■□□□□ 0.54
HIF3A-211ENST00000528563 TUSC3Q13454 348 aa18.42■□□□□ 0.54
HIF3A-211ENST00000528563 HERC4Q5GLZ8 1057 aaPredicted RBP18.42■□□□□ 0.54
HIF3A-211ENST00000528563 PLPP4Q5VZY2 271 aa18.42■□□□□ 0.54
HIF3A-211ENST00000528563 MAP4K3Q8IVH8 894 aa18.42■□□□□ 0.54
HIF3A-211ENST00000528563 ACAP3Q96P50 834 aa18.42■□□□□ 0.54
HIF3A-211ENST00000528563 COLEC11Q9BWP8 271 aa18.42■□□□□ 0.54
HIF3A-211ENST00000528563 TRIM9Q9C026 710 aa18.42■□□□□ 0.54
HIF3A-211ENST00000528563 ZBP1Q9H171 429 aa18.42■□□□□ 0.54
HIF3A-211ENST00000528563 OLFML3Q9NRN5 406 aa18.42■□□□□ 0.54
HIF3A-211ENST00000528563 PANK4Q9NVE7 773 aa18.42■□□□□ 0.54
HIF3A-211ENST00000528563 CLDND1Q9NY35 253 aa18.42■□□□□ 0.54
HIF3A-211ENST00000528563 STK39Q9UEW8 545 aa18.42■□□□□ 0.54
HIF3A-211ENST00000528563 PRG3Q9Y2Y8 225 aaPredicted RBP18.42■□□□□ 0.54
HIF3A-211ENST00000528563 IRAK3Q9Y616 596 aa18.42■□□□□ 0.54
HIF3A-211ENST00000528563 SMIM28A0A1B0GU29 152 aa18.41■□□□□ 0.54
HIF3A-211ENST00000528563 F8W810 466 aa18.41■□□□□ 0.54
HIF3A-211ENST00000528563 LINC01565O15544 149 aa18.41■□□□□ 0.54
HIF3A-211ENST00000528563 MEFVO15553 781 aaPredicted RBP18.41■□□□□ 0.54
HIF3A-211ENST00000528563 CTSAP10619 480 aa18.41■□□□□ 0.54
HIF3A-211ENST00000528563 LIG4P49917 911 aa18.41■□□□□ 0.54
HIF3A-211ENST00000528563 KCNQ1P51787 676 aa18.41■□□□□ 0.54
HIF3A-211ENST00000528563 YARSP54577 528 aaKnown RBP18.41■□□□□ 0.54
HIF3A-211ENST00000528563 AMPD3Q01432 767 aa18.41■□□□□ 0.54
HIF3A-211ENST00000528563 DLX2Q07687 328 aaPredicted RBP18.41■□□□□ 0.54
HIF3A-211ENST00000528563 SMC1AQ14683 1233 aaKnown RBP18.41■□□□□ 0.54
HIF3A-211ENST00000528563 NOLC1Q14978 699 aaKnown RBP eCLIP18.41■□□□□ 0.54
HIF3A-211ENST00000528563 DUSP6Q16828 381 aa18.41■□□□□ 0.54
HIF3A-211ENST00000528563 LEXMQ3ZCV2 418 aa18.41■□□□□ 0.54
HIF3A-211ENST00000528563 SLC39A4Q6P5W5 647 aa18.41■□□□□ 0.54
HIF3A-211ENST00000528563 BICD1Q96G01 975 aa18.41■□□□□ 0.54
HIF3A-211ENST00000528563 PPP1R10Q96QC0 940 aaKnown RBP18.41■□□□□ 0.54
HIF3A-211ENST00000528563 CDCA3Q99618 268 aaPredicted RBP18.41■□□□□ 0.54
HIF3A-211ENST00000528563 MRPL44Q9H9J2 332 aaKnown RBP18.41■□□□□ 0.54
HIF3A-211ENST00000528563 TOPORSQ9NS56 1045 aaPredicted RBP18.41■□□□□ 0.54
HIF3A-211ENST00000528563 ANKFY1Q9P2R3 1169 aa18.41■□□□□ 0.54
HIF3A-211ENST00000528563 TCHHQ07283 1943 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms