RNA–Protein interactions for RNA: ENST00000528364.1

CLNS1A-210, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CLNS1A, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-210ENST00000528364 PRKCBP05771 671 aa17.16■□□□□ 0.34
CLNS1A-210ENST00000528364 PRPF4BQ13523 1007 aaKnown RBP17.16■□□□□ 0.34
CLNS1A-210ENST00000528364 TMEM132AQ24JP5 1023 aa17.16■□□□□ 0.34
CLNS1A-210ENST00000528364 LILRA6Q6PI73 481 aa17.16■□□□□ 0.34
CLNS1A-210ENST00000528364 C15orf39Q6ZRI6 1047 aa17.16■□□□□ 0.34
CLNS1A-210ENST00000528364 ST13P5Q8NFI4 369 aaPredicted RBP17.16■□□□□ 0.34
CLNS1A-210ENST00000528364 ERMNQ8TAM6 284 aa17.16■□□□□ 0.34
CLNS1A-210ENST00000528364 SMG7Q92540 1137 aaKnown RBP17.16■□□□□ 0.34
CLNS1A-210ENST00000528364 ATOH1Q92858 354 aaPredicted RBP17.16■□□□□ 0.34
CLNS1A-210ENST00000528364 PRIMPOLQ96LW4 560 aa17.16■□□□□ 0.34
CLNS1A-210ENST00000528364 MYADMQ96S97 322 aa17.16■□□□□ 0.34
CLNS1A-210ENST00000528364 CCDC113Q9H0I3 377 aa17.16■□□□□ 0.34
CLNS1A-210ENST00000528364 WDR6Q9NNW5 1121 aaKnown RBP17.16■□□□□ 0.34
CLNS1A-210ENST00000528364 ACKR2O00590 384 aa17.15■□□□□ 0.34
CLNS1A-210ENST00000528364 NARSO43776 548 aaKnown RBP17.15■□□□□ 0.34
CLNS1A-210ENST00000528364 GBP2P32456 591 aaPredicted RBP17.15■□□□□ 0.34
CLNS1A-210ENST00000528364 CCT6AP40227 531 aaKnown RBP17.15■□□□□ 0.34
CLNS1A-210ENST00000528364 TOB1P50616 345 aaPredicted RBP17.15■□□□□ 0.34
CLNS1A-210ENST00000528364 TUSC3Q13454 348 aa17.15■□□□□ 0.34
CLNS1A-210ENST00000528364 HSP90AA2PQ14568 343 aaPredicted RBP17.15■□□□□ 0.34
CLNS1A-210ENST00000528364 RTP2Q5QGT7 225 aa17.15■□□□□ 0.34
CLNS1A-210ENST00000528364 NT5DC1Q5TFE4 455 aa17.15■□□□□ 0.34
CLNS1A-210ENST00000528364 DEPTORQ8TB45 409 aa17.15■□□□□ 0.34
CLNS1A-210ENST00000528364 NT5C3AQ9H0P0 336 aa17.15■□□□□ 0.34
CLNS1A-210ENST00000528364 KIAA1024Q9UPX6 916 aa17.15■□□□□ 0.34
CLNS1A-210ENST00000528364 GDAQ9Y2T3 454 aa17.15■□□□□ 0.34
CLNS1A-210ENST00000528364 PTPRZ1P23471 2315 aaPredicted RBP17.15■□□□□ 0.34
CLNS1A-210ENST00000528364 MTCL1Q9Y4B5 1905 aaKnown RBP17.14■□□□□ 0.33
CLNS1A-210ENST00000528364 N4BP3O15049 544 aa17.14■□□□□ 0.33
CLNS1A-210ENST00000528364 GALR2O43603 387 aaPredicted RBP17.14■□□□□ 0.33
CLNS1A-210ENST00000528364 PI15O43692 258 aa17.14■□□□□ 0.33
CLNS1A-210ENST00000528364 RECQL4O94761 1208 aa17.14■□□□□ 0.33
CLNS1A-210ENST00000528364 NPR3P17342 541 aa17.14■□□□□ 0.33
CLNS1A-210ENST00000528364 RBM25P49756 843 aaKnown RBP17.14■□□□□ 0.33
CLNS1A-210ENST00000528364 TDGQ13569 410 aa17.14■□□□□ 0.33
CLNS1A-210ENST00000528364 GNL2Q13823 731 aaKnown RBP17.14■□□□□ 0.33
CLNS1A-210ENST00000528364 NAB2Q15742 525 aa17.14■□□□□ 0.33
CLNS1A-210ENST00000528364 MAPK6Q16659 721 aa17.14■□□□□ 0.33
CLNS1A-210ENST00000528364 ASTLQ6HA08 431 aaPredicted RBP17.14■□□□□ 0.33
CLNS1A-210ENST00000528364 CEP57Q86XR8 500 aa17.14■□□□□ 0.33
CLNS1A-210ENST00000528364 FLCNQ8NFG4 579 aa17.14■□□□□ 0.33
CLNS1A-210ENST00000528364 ZSCAN31Q96LW9 406 aaPredicted RBP17.14■□□□□ 0.33
CLNS1A-210ENST00000528364 C2orf40Q9H1Z8 148 aa17.14■□□□□ 0.33
CLNS1A-210ENST00000528364 BHMT2Q9H2M3 363 aa17.14■□□□□ 0.33
CLNS1A-210ENST00000528364 FNIP2Q9P278 1114 aa17.14■□□□□ 0.33
CLNS1A-210ENST00000528364 LRWD1Q9UFC0 647 aa17.14■□□□□ 0.33
CLNS1A-210ENST00000528364 DOCK8Q8NF50 2099 aa17.14■□□□□ 0.33
CLNS1A-210ENST00000528364 ADAM12O43184 909 aa17.13■□□□□ 0.33
CLNS1A-210ENST00000528364 EIF5BO60841 1220 aaKnown RBP17.13■□□□□ 0.33
CLNS1A-210ENST00000528364 KIF4AO95239 1232 aa17.13■□□□□ 0.33
CLNS1A-210ENST00000528364 THP07101 528 aa17.13■□□□□ 0.33
CLNS1A-210ENST00000528364 NAMPTP43490 491 aa17.13■□□□□ 0.33
CLNS1A-210ENST00000528364 IL17AQ16552 155 aa17.13■□□□□ 0.33
CLNS1A-210ENST00000528364 FAM171A1Q5VUB5 890 aa17.13■□□□□ 0.33
CLNS1A-210ENST00000528364 FAM184AQ8NB25 1140 aa17.13■□□□□ 0.33
CLNS1A-210ENST00000528364 CLSTN3Q9BQT9 956 aa17.13■□□□□ 0.33
CLNS1A-210ENST00000528364 MFSD1Q9H3U5 465 aa17.13■□□□□ 0.33
CLNS1A-210ENST00000528364 PLEKHA4Q9H4M7 779 aa17.13■□□□□ 0.33
CLNS1A-210ENST00000528364 PIDD1Q9HB75 910 aa17.13■□□□□ 0.33
CLNS1A-210ENST00000528364 PCDHB6Q9Y5E3 794 aa17.13■□□□□ 0.33
CLNS1A-210ENST00000528364 CLUHO75153 1309 aa17.13■□□□□ 0.33
CLNS1A-210ENST00000528364 TRIP11Q15643 1979 aa17.13■□□□□ 0.33
CLNS1A-210ENST00000528364 PP2D1A8MPX8 630 aa17.12■□□□□ 0.33
CLNS1A-210ENST00000528364 E9PMD0 336 aa17.12■□□□□ 0.33
CLNS1A-210ENST00000528364 CDC25AP30304 524 aa17.12■□□□□ 0.33
CLNS1A-210ENST00000528364 FXR2P51116 673 aaKnown RBP eCLIP17.12■□□□□ 0.33
CLNS1A-210ENST00000528364 HMGN5P82970 282 aaKnown RBP17.12■□□□□ 0.33
CLNS1A-210ENST00000528364 PTGDRQ13258 359 aa17.12■□□□□ 0.33
CLNS1A-210ENST00000528364 ORC2Q13416 577 aaPredicted RBP17.12■□□□□ 0.33
CLNS1A-210ENST00000528364 GLRA4Q5JXX5 417 aa17.12■□□□□ 0.33
CLNS1A-210ENST00000528364 LNX1Q8TBB1 728 aaPredicted RBP17.12■□□□□ 0.33
CLNS1A-210ENST00000528364 HDAC7Q8WUI4 952 aa17.12■□□□□ 0.33
CLNS1A-210ENST00000528364 TTPALQ9BTX7 342 aa17.12■□□□□ 0.33
CLNS1A-210ENST00000528364 PRKD2Q9BZL6 878 aa17.12■□□□□ 0.33
CLNS1A-210ENST00000528364 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.12■□□□□ 0.33
CLNS1A-210ENST00000528364 DDX19AQ9NUU7 478 aaKnown RBP17.12■□□□□ 0.33
CLNS1A-210ENST00000528364 DPP7Q9UHL4 492 aa17.12■□□□□ 0.33
CLNS1A-210ENST00000528364 ZMYND10O75800 440 aa17.11■□□□□ 0.33
CLNS1A-210ENST00000528364 U2AF2P26368 475 aaKnown RBP eCLIP17.11■□□□□ 0.335e-21■□□□□ 9.3
CLNS1A-210ENST00000528364 TRAPPC10P48553 1259 aa17.11■□□□□ 0.33
CLNS1A-210ENST00000528364 NTHL1P78549 312 aa17.11■□□□□ 0.33
CLNS1A-210ENST00000528364 PPP2R5AQ15172 486 aa17.11■□□□□ 0.33
CLNS1A-210ENST00000528364 CWF19L1Q69YN2 538 aaKnown RBP17.11■□□□□ 0.33
CLNS1A-210ENST00000528364 CD300LGQ6UXG3 332 aa17.11■□□□□ 0.33
CLNS1A-210ENST00000528364 CYP26C1Q6V0L0 522 aa17.11■□□□□ 0.33
CLNS1A-210ENST00000528364 GPR65Q8IYL9 337 aa17.11■□□□□ 0.33
CLNS1A-210ENST00000528364 SIX5Q8N196 739 aa17.11■□□□□ 0.33
CLNS1A-210ENST00000528364 SLC44A3Q8N4M1 653 aa17.11■□□□□ 0.33
CLNS1A-210ENST00000528364 IFT74Q96LB3 600 aa17.11■□□□□ 0.33
CLNS1A-210ENST00000528364 ADPGKQ9BRR6 497 aa17.11■□□□□ 0.33
CLNS1A-210ENST00000528364 RHOBTB2Q9BYZ6 727 aa17.11■□□□□ 0.33
CLNS1A-210ENST00000528364 IGSF9Q9P2J2 1179 aa17.11■□□□□ 0.33
CLNS1A-210ENST00000528364 EPS15L1Q9UBC2 864 aa17.11■□□□□ 0.33
CLNS1A-210ENST00000528364 FBXL21Q9UKT6 434 aa17.11■□□□□ 0.33
CLNS1A-210ENST00000528364 NOL7Q9UMY1 257 aaKnown RBP17.11■□□□□ 0.33
CLNS1A-210ENST00000528364 DUSP12Q9UNI6 340 aa17.11■□□□□ 0.33
CLNS1A-210ENST00000528364 SF3B1O75533 1304 aaKnown RBP eCLIP17.11■□□□□ 0.33
CLNS1A-210ENST00000528364 ZMYM2Q9UBW7 1377 aa17.11■□□□□ 0.33
CLNS1A-210ENST00000528364 RIF1Q5UIP0 2472 aaKnown RBP17.1■□□□□ 0.33
CLNS1A-210ENST00000528364 CCDC169A6NNP5 214 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms