RNA–Protein interactions for RNA: ENST00000527954.1

EXOSC4-203, Transcript of exosome component 4, humanhuman

TSL 2

Gene EXOSC4, Length 1,065 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-203ENST00000527954 HOXD11P31277 338 aaPredicted RBP16.72■□□□□ 0.27
EXOSC4-203ENST00000527954 PRPHP41219 470 aa16.72■□□□□ 0.27
EXOSC4-203ENST00000527954 EFNA5P52803 228 aa16.72■□□□□ 0.27
EXOSC4-203ENST00000527954 TUSC3Q13454 348 aa16.72■□□□□ 0.27
EXOSC4-203ENST00000527954 HSP90AA2PQ14568 343 aaPredicted RBP16.72■□□□□ 0.27
EXOSC4-203ENST00000527954 USP41Q3LFD5 358 aa16.72■□□□□ 0.27
EXOSC4-203ENST00000527954 SPATA31D4Q6ZUB0 917 aa16.72■□□□□ 0.27
EXOSC4-203ENST00000527954 PALB2Q86YC2 1186 aa16.72■□□□□ 0.27
EXOSC4-203ENST00000527954 GLYCTKQ8IVS8 523 aa16.72■□□□□ 0.27
EXOSC4-203ENST00000527954 SUGP1Q8IWZ8 645 aaKnown RBP16.72■□□□□ 0.27
EXOSC4-203ENST00000527954 ZDHHC14Q8IZN3 488 aa16.72■□□□□ 0.27
EXOSC4-203ENST00000527954 FBXL6Q8N531 539 aa16.72■□□□□ 0.27
EXOSC4-203ENST00000527954 RIN2Q8WYP3 895 aaPredicted RBP16.72■□□□□ 0.27
EXOSC4-203ENST00000527954 KCNH6Q9H252 994 aa16.72■□□□□ 0.27
EXOSC4-203ENST00000527954 SORCS3Q9UPU3 1222 aa16.72■□□□□ 0.27
EXOSC4-203ENST00000527954 GDAQ9Y2T3 454 aa16.72■□□□□ 0.27
EXOSC4-203ENST00000527954 TECTAO75443 2155 aa16.72■□□□□ 0.27
EXOSC4-203ENST00000527954 CCDC195A0A1B0GUA6 201 aa16.71■□□□□ 0.27
EXOSC4-203ENST00000527954 CCDC169A6NNP5 214 aa16.71■□□□□ 0.27
EXOSC4-203ENST00000527954 K7ERI5 159 aa16.71■□□□□ 0.27
EXOSC4-203ENST00000527954 BRD1O95696 1058 aa16.71■□□□□ 0.27
EXOSC4-203ENST00000527954 GLUD1P00367 558 aa16.71■□□□□ 0.27
EXOSC4-203ENST00000527954 THP07101 528 aa16.71■□□□□ 0.27
EXOSC4-203ENST00000527954 RPL17P18621 184 aaKnown RBP16.71■□□□□ 0.27
EXOSC4-203ENST00000527954 ZRSR1Q15695 479 aaKnown RBP16.71■□□□□ 0.27
EXOSC4-203ENST00000527954 ATF7IP2Q5U623 682 aa16.71■□□□□ 0.27
EXOSC4-203ENST00000527954 CCDC149Q6ZUS6 474 aa16.71■□□□□ 0.27
EXOSC4-203ENST00000527954 KCNK18Q7Z418 384 aa16.71■□□□□ 0.27
EXOSC4-203ENST00000527954 PLCD3Q8N3E9 789 aa16.71■□□□□ 0.27
EXOSC4-203ENST00000527954 HASPINQ8TF76 798 aa16.71■□□□□ 0.27
EXOSC4-203ENST00000527954 MMTAG2Q9BU76 263 aaKnown RBP16.71■□□□□ 0.27
EXOSC4-203ENST00000527954 SMOC2Q9H3U7 446 aa16.71■□□□□ 0.27
EXOSC4-203ENST00000527954 UPF2Q9HAU5 1272 aaKnown RBP16.71■□□□□ 0.27
EXOSC4-203ENST00000527954 USTQ9Y2C2 406 aa16.71■□□□□ 0.27
EXOSC4-203ENST00000527954 H3BQV1 296 aa16.7■□□□□ 0.26
EXOSC4-203ENST00000527954 HIP1RO75146 1068 aa16.7■□□□□ 0.26
EXOSC4-203ENST00000527954 RFPL2O75678 378 aa16.7■□□□□ 0.26
EXOSC4-203ENST00000527954 KIF4AO95239 1232 aa16.7■□□□□ 0.26
EXOSC4-203ENST00000527954 PDGFBP01127 241 aaPredicted RBP16.7■□□□□ 0.26
EXOSC4-203ENST00000527954 NPTX2P47972 431 aa16.7■□□□□ 0.26
EXOSC4-203ENST00000527954 PEX3P56589 373 aa16.7■□□□□ 0.26
EXOSC4-203ENST00000527954 MTMR3Q13615 1198 aa16.7■□□□□ 0.26
EXOSC4-203ENST00000527954 NAB2Q15742 525 aa16.7■□□□□ 0.26
EXOSC4-203ENST00000527954 DCAF4L1Q3SXM0 396 aa16.7■□□□□ 0.26
EXOSC4-203ENST00000527954 RILPL1Q5EBL4 403 aa16.7■□□□□ 0.26
EXOSC4-203ENST00000527954 IER5LQ5T953 404 aa16.7■□□□□ 0.26
EXOSC4-203ENST00000527954 PRSS55Q6UWB4 352 aaPredicted RBP16.7■□□□□ 0.26
EXOSC4-203ENST00000527954 C15orf39Q6ZRI6 1047 aa16.7■□□□□ 0.26
EXOSC4-203ENST00000527954 DAW1Q8N136 415 aa16.7■□□□□ 0.26
EXOSC4-203ENST00000527954 ACSF2Q96CM8 615 aaPredicted RBP16.7■□□□□ 0.26
EXOSC4-203ENST00000527954 RUSC1Q9BVN2 902 aa16.7■□□□□ 0.26
EXOSC4-203ENST00000527954 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.7■□□□□ 0.26
EXOSC4-203ENST00000527954 DPP7Q9UHL4 492 aa16.7■□□□□ 0.26
EXOSC4-203ENST00000527954 TDRD15B5MCY1 1934 aaKnown RBP16.7■□□□□ 0.26
EXOSC4-203ENST00000527954 SF3B1O75533 1304 aaKnown RBP eCLIP16.7■□□□□ 0.261e-7■■■■■ 72.4
EXOSC4-203ENST00000527954 ATP2C1P98194 919 aaPredicted RBP16.69■□□□□ 0.26
EXOSC4-203ENST00000527954 NHLH1Q02575 133 aa16.69■□□□□ 0.26
EXOSC4-203ENST00000527954 RTP2Q5QGT7 225 aa16.69■□□□□ 0.26
EXOSC4-203ENST00000527954 RINT1Q6NUQ1 792 aa16.69■□□□□ 0.26
EXOSC4-203ENST00000527954 ELMSAN1Q6PJG2 1045 aa16.69■□□□□ 0.26
EXOSC4-203ENST00000527954 OTOP3Q7RTS5 596 aa16.69■□□□□ 0.26
EXOSC4-203ENST00000527954 CEP57Q86XR8 500 aa16.69■□□□□ 0.26
EXOSC4-203ENST00000527954 GPR65Q8IYL9 337 aa16.69■□□□□ 0.26
EXOSC4-203ENST00000527954 UBALD2Q8IYN6 164 aa16.69■□□□□ 0.26
EXOSC4-203ENST00000527954 CMASQ8NFW8 434 aaPredicted RBP16.69■□□□□ 0.26
EXOSC4-203ENST00000527954 FNIP2Q9P278 1114 aa16.69■□□□□ 0.26
EXOSC4-203ENST00000527954 TNFSF13BQ9Y275 285 aa16.69■□□□□ 0.26
EXOSC4-203ENST00000527954 TRIOO75962 3097 aa16.68■□□□□ 0.26
EXOSC4-203ENST00000527954 SFI1A8K8P3 1242 aa16.68■□□□□ 0.26
EXOSC4-203ENST00000527954 TGM5O43548 720 aa16.68■□□□□ 0.26
EXOSC4-203ENST00000527954 VCPP55072 806 aaKnown RBP16.68■□□□□ 0.26
EXOSC4-203ENST00000527954 MAPK7Q13164 816 aa16.68■□□□□ 0.26
EXOSC4-203ENST00000527954 GLRA4Q5JXX5 417 aa16.68■□□□□ 0.26
EXOSC4-203ENST00000527954 FAM171A1Q5VUB5 890 aa16.68■□□□□ 0.26
EXOSC4-203ENST00000527954 LILRA6Q6PI73 481 aa16.68■□□□□ 0.26
EXOSC4-203ENST00000527954 C1orf186Q6ZWK4 172 aa16.68■□□□□ 0.26
EXOSC4-203ENST00000527954 ALYREFQ86V81 257 aaKnown RBP16.68■□□□□ 0.26
EXOSC4-203ENST00000527954 PRSS33Q8NF86 280 aa16.68■□□□□ 0.26
EXOSC4-203ENST00000527954 HDAC7Q8WUI4 952 aa16.68■□□□□ 0.26
EXOSC4-203ENST00000527954 PNMA5Q96PV4 448 aa16.68■□□□□ 0.26
EXOSC4-203ENST00000527954 PLIN2Q99541 437 aa16.68■□□□□ 0.26
EXOSC4-203ENST00000527954 TMEM134Q9H6X4 195 aa16.68■□□□□ 0.26
EXOSC4-203ENST00000527954 KMT5AQ9NQR1 393 aa16.68■□□□□ 0.26
EXOSC4-203ENST00000527954 SMC3Q9UQE7 1217 aa16.68■□□□□ 0.26
EXOSC4-203ENST00000527954 PHLPP2Q6ZVD8 1323 aa16.68■□□□□ 0.26
EXOSC4-203ENST00000527954 VWA3AA6NCI4 1184 aa16.67■□□□□ 0.26
EXOSC4-203ENST00000527954 IGFBP6P24592 240 aaPredicted RBP16.67■□□□□ 0.26
EXOSC4-203ENST00000527954 OSTNP61366 133 aa16.67■□□□□ 0.26
EXOSC4-203ENST00000527954 RAD51AP2Q09MP3 1159 aa16.67■□□□□ 0.26
EXOSC4-203ENST00000527954 DMP1Q13316 513 aaPredicted RBP16.67■□□□□ 0.26
EXOSC4-203ENST00000527954 TAS1R3Q7RTX0 852 aa16.67■□□□□ 0.26
EXOSC4-203ENST00000527954 APBB1IPQ7Z5R6 666 aaPredicted RBP16.67■□□□□ 0.26
EXOSC4-203ENST00000527954 CEP120Q8N960 986 aa16.67■□□□□ 0.26
EXOSC4-203ENST00000527954 SMG7Q92540 1137 aaKnown RBP16.67■□□□□ 0.26
EXOSC4-203ENST00000527954 ZNF707Q96C28 371 aaPredicted RBP16.67■□□□□ 0.26
EXOSC4-203ENST00000527954 DRC1Q96MC2 740 aa16.67■□□□□ 0.26
EXOSC4-203ENST00000527954 ACO2Q99798 780 aaKnown RBP16.67■□□□□ 0.26
EXOSC4-203ENST00000527954 TTPALQ9BTX7 342 aa16.67■□□□□ 0.26
EXOSC4-203ENST00000527954 TARS2Q9BW92 718 aaKnown RBP16.67■□□□□ 0.26
EXOSC4-203ENST00000527954 CDT1Q9H211 546 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms