RNA–Protein interactions for RNA: ENST00000527825.1

CHD7-205, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 3

Gene CHD7, Length 434 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-205ENST00000527825 SPAG17Q6Q759 2223 aa4.62□□□□□ -1.67
CHD7-205ENST00000527825 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.62□□□□□ -1.67
CHD7-205ENST00000527825 FAM170BA6NMN3 283 aa4.62□□□□□ -1.67
CHD7-205ENST00000527825 CYSRT1A8MQ03 144 aa4.62□□□□□ -1.67
CHD7-205ENST00000527825 MINDY4BA8MYZ0 360 aa4.62□□□□□ -1.67
CHD7-205ENST00000527825 H3BRB1 525 aa4.62□□□□□ -1.67
CHD7-205ENST00000527825 TULP2O00295 520 aa4.62□□□□□ -1.67
CHD7-205ENST00000527825 NOP56O00567 594 aaKnown RBP4.62□□□□□ -1.67
CHD7-205ENST00000527825 PRKAB2O43741 272 aa4.62□□□□□ -1.67
CHD7-205ENST00000527825 CLASP2O75122 1294 aaKnown RBP4.62□□□□□ -1.67
CHD7-205ENST00000527825 MAP3K6O95382 1288 aa4.62□□□□□ -1.67
CHD7-205ENST00000527825 TPM3P06753 285 aa4.62□□□□□ -1.67
CHD7-205ENST00000527825 HMGB1P09429 215 aaKnown RBP4.62□□□□□ -1.67
CHD7-205ENST00000527825 TSPY3P0CV98 308 aa4.62□□□□□ -1.67
CHD7-205ENST00000527825 TSPY8P0CW00 308 aa4.62□□□□□ -1.67
CHD7-205ENST00000527825 RARAP10276 462 aa4.62□□□□□ -1.67
CHD7-205ENST00000527825 GSPT1P15170 499 aaKnown RBP4.62□□□□□ -1.67
CHD7-205ENST00000527825 EDNRBP24530 442 aa4.62□□□□□ -1.67
CHD7-205ENST00000527825 GATMP50440 423 aa4.62□□□□□ -1.67
CHD7-205ENST00000527825 LIMK1P53667 647 aa4.62□□□□□ -1.67
CHD7-205ENST00000527825 RPS6P62753 249 aaKnown RBP4.62□□□□□ -1.67
CHD7-205ENST00000527825 SIM2Q14190 667 aaPredicted RBP4.62□□□□□ -1.67
CHD7-205ENST00000527825 LPIN1Q14693 890 aa4.62□□□□□ -1.67
CHD7-205ENST00000527825 NOLC1Q14978 699 aaKnown RBP eCLIP4.62□□□□□ -1.67
CHD7-205ENST00000527825 LETM2Q2VYF4 491 aa4.62□□□□□ -1.67
CHD7-205ENST00000527825 ZBTB41Q5SVQ8 909 aa4.62□□□□□ -1.67
CHD7-205ENST00000527825 STPG1Q5TH74 334 aa4.62□□□□□ -1.67
CHD7-205ENST00000527825 RCSD1Q6JBY9 416 aa4.62□□□□□ -1.67
CHD7-205ENST00000527825 CTR9Q6PD62 1173 aa4.62□□□□□ -1.67
CHD7-205ENST00000527825 ELMSAN1Q6PJG2 1045 aa4.62□□□□□ -1.67
CHD7-205ENST00000527825 C20orf204Q6ZNR8 217 aa4.62□□□□□ -1.67
CHD7-205ENST00000527825 ITPRIPQ8IWB1 547 aa4.62□□□□□ -1.67
CHD7-205ENST00000527825 TMEM57Q8N5G2 664 aa4.62□□□□□ -1.67
CHD7-205ENST00000527825 KIAA1524Q8TCG1 905 aa4.62□□□□□ -1.67
CHD7-205ENST00000527825 SSH1Q8WYL5 1049 aa4.62□□□□□ -1.67
CHD7-205ENST00000527825 PIK3R5Q8WYR1 880 aa4.62□□□□□ -1.67
CHD7-205ENST00000527825 MKL1Q969V6 931 aa4.62□□□□□ -1.67
CHD7-205ENST00000527825 INTS4Q96HW7 963 aaKnown RBP4.62□□□□□ -1.67
CHD7-205ENST00000527825 KLHL5Q96PQ7 755 aa4.62□□□□□ -1.67
CHD7-205ENST00000527825 HNRNPABQ99729 332 aaKnown RBP4.62□□□□□ -1.67
CHD7-205ENST00000527825 SCNM1Q9BWG6 230 aa4.62□□□□□ -1.67
CHD7-205ENST00000527825 RNPEPQ9H4A4 650 aa4.62□□□□□ -1.67
CHD7-205ENST00000527825 TUT1Q9H6E5 874 aaKnown RBP4.62□□□□□ -1.67
CHD7-205ENST00000527825 SFXN1Q9H9B4 322 aa4.62□□□□□ -1.67
CHD7-205ENST00000527825 MLXIPQ9HAP2 919 aa4.62□□□□□ -1.67
CHD7-205ENST00000527825 SETD4Q9NVD3 440 aa4.62□□□□□ -1.67
CHD7-205ENST00000527825 MTMR4Q9NYA4 1195 aa4.62□□□□□ -1.67
CHD7-205ENST00000527825 ZFATQ9P243 1243 aa4.62□□□□□ -1.67
CHD7-205ENST00000527825 USP25Q9UHP3 1055 aa4.62□□□□□ -1.67
CHD7-205ENST00000527825 DDX41Q9UJV9 622 aaKnown RBP4.62□□□□□ -1.67
CHD7-205ENST00000527825 ZNF215Q9UL58 517 aaPredicted RBP4.62□□□□□ -1.67
CHD7-205ENST00000527825 SYCE3A1L190 88 aa4.61□□□□□ -1.67
CHD7-205ENST00000527825 CCDC66A2RUB6 948 aa4.61□□□□□ -1.67
CHD7-205ENST00000527825 DENND3A2RUS2 1198 aa4.61□□□□□ -1.67
CHD7-205ENST00000527825 C2orf71A6NGG8 1288 aa4.61□□□□□ -1.67
CHD7-205ENST00000527825 IPO8O15397 1037 aaKnown RBP4.61□□□□□ -1.67
CHD7-205ENST00000527825 EPB41L2O43491 1005 aaKnown RBP4.61□□□□□ -1.67
CHD7-205ENST00000527825 PLA2G6O60733 806 aa4.61□□□□□ -1.67
CHD7-205ENST00000527825 CXCL14O95715 111 aa4.61□□□□□ -1.67
CHD7-205ENST00000527825 GGPS1O95749 300 aa4.61□□□□□ -1.67
CHD7-205ENST00000527825 CHRNA1P02708 482 aa4.61□□□□□ -1.67
CHD7-205ENST00000527825 GLULP15104 373 aa4.61□□□□□ -1.67
CHD7-205ENST00000527825 CD52P31358 61 aa4.61□□□□□ -1.67
CHD7-205ENST00000527825 MCM2P49736 904 aa4.61□□□□□ -1.67
CHD7-205ENST00000527825 STARD6P59095 220 aa4.61□□□□□ -1.67
CHD7-205ENST00000527825 PLCB3Q01970 1234 aa4.61□□□□□ -1.67
CHD7-205ENST00000527825 PRKCQQ04759 706 aa4.61□□□□□ -1.67
CHD7-205ENST00000527825 NCBP1Q09161 790 aaKnown RBP4.61□□□□□ -1.67
CHD7-205ENST00000527825 PAK2Q13177 524 aa4.61□□□□□ -1.67
CHD7-205ENST00000527825 MTX1Q13505 466 aa4.61□□□□□ -1.67
CHD7-205ENST00000527825 SNW1Q13573 536 aaKnown RBP4.61□□□□□ -1.67
CHD7-205ENST00000527825 PKP1Q13835 747 aa4.61□□□□□ -1.67
CHD7-205ENST00000527825 MLF2Q15773 248 aaPredicted RBP4.61□□□□□ -1.67
CHD7-205ENST00000527825 COL28A1Q2UY09 1125 aa4.61□□□□□ -1.67
CHD7-205ENST00000527825 FBXO47Q5MNV8 452 aa4.61□□□□□ -1.67
CHD7-205ENST00000527825 TTC22Q5TAA0 569 aa4.61□□□□□ -1.67
CHD7-205ENST00000527825 ARHGEF16Q5VV41 709 aa4.61□□□□□ -1.67
CHD7-205ENST00000527825 KCNV1Q6PIU1 500 aa4.61□□□□□ -1.67
CHD7-205ENST00000527825 CEP68Q76N32 757 aa4.61□□□□□ -1.67
CHD7-205ENST00000527825 RASGRP2Q7LDG7 609 aa4.61□□□□□ -1.67
CHD7-205ENST00000527825 GPR149Q86SP6 731 aa4.61□□□□□ -1.67
CHD7-205ENST00000527825 PPFIBP1Q86W92 1011 aa4.61□□□□□ -1.67
CHD7-205ENST00000527825 TEX2Q8IWB9 1127 aa4.61□□□□□ -1.67
CHD7-205ENST00000527825 ABI1Q8IZP0 508 aa4.61□□□□□ -1.67
CHD7-205ENST00000527825 MRPL43Q8N983 215 aaKnown RBP4.61□□□□□ -1.67
CHD7-205ENST00000527825 NSUN6Q8TEA1 469 aaKnown RBP4.61□□□□□ -1.67
CHD7-205ENST00000527825 GATA6Q92908 595 aa4.61□□□□□ -1.67
CHD7-205ENST00000527825 ZNF558Q96NG5 402 aa4.61□□□□□ -1.67
CHD7-205ENST00000527825 IWS1Q96ST2 819 aa4.61□□□□□ -1.67
CHD7-205ENST00000527825 DNAJC2Q99543 621 aaKnown RBP4.61□□□□□ -1.67
CHD7-205ENST00000527825 MEIS3Q99687 375 aa4.61□□□□□ -1.67
CHD7-205ENST00000527825 FUCA2Q9BTY2 467 aa4.61□□□□□ -1.67
CHD7-205ENST00000527825 LSM14BQ9BX40 385 aaKnown RBP4.61□□□□□ -1.67
CHD7-205ENST00000527825 OSBPL6Q9BZF3 934 aa4.61□□□□□ -1.67
CHD7-205ENST00000527825 LNPKQ9C0E8 428 aa4.61□□□□□ -1.67
CHD7-205ENST00000527825 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.61□□□□□ -1.67
CHD7-205ENST00000527825 TSPYL1Q9H0U9 437 aa4.61□□□□□ -1.67
CHD7-205ENST00000527825 RANBP17Q9H2T7 1088 aaKnown RBP4.61□□□□□ -1.67
CHD7-205ENST00000527825 BCAS3Q9H6U6 928 aa4.61□□□□□ -1.67
CHD7-205ENST00000527825 EHMT1Q9H9B1 1298 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms