RNA–Protein interactions for RNA: ENST00000527586.1

VPS26B-204, Transcript of VPS26, retromer complex component B, humanhuman

TSL 3

Gene VPS26B, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-204ENST00000527586 NXPE2Q96DL1 559 aa7.97□□□□□ -1.13
VPS26B-204ENST00000527586 B3GALT6Q96L58 329 aa7.97□□□□□ -1.13
VPS26B-204ENST00000527586 SENP7Q9BQF6 1050 aa7.97□□□□□ -1.13
VPS26B-204ENST00000527586 TMEM175Q9BSA9 504 aa7.97□□□□□ -1.13
VPS26B-204ENST00000527586 LRRC4CQ9HCJ2 640 aa7.97□□□□□ -1.13
VPS26B-204ENST00000527586 EPB41L4AQ9HCS5 686 aaPredicted RBP7.97□□□□□ -1.13
VPS26B-204ENST00000527586 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.97□□□□□ -1.13
VPS26B-204ENST00000527586 DNAAF2Q9NVR5 837 aaKnown RBP7.97□□□□□ -1.13
VPS26B-204ENST00000527586 MARCH5Q9NX47 278 aa7.97□□□□□ -1.13
VPS26B-204ENST00000527586 FNIP2Q9P278 1114 aa7.97□□□□□ -1.13
VPS26B-204ENST00000527586 EBF1Q9UH73 591 aa7.97□□□□□ -1.13
VPS26B-204ENST00000527586 SLC6A14Q9UN76 642 aa7.97□□□□□ -1.13
VPS26B-204ENST00000527586 PRG3Q9Y2Y8 225 aaPredicted RBP7.97□□□□□ -1.13
VPS26B-204ENST00000527586 WDR81Q562E7 1941 aa7.97□□□□□ -1.13
VPS26B-204ENST00000527586 COL4A2P08572 1712 aa7.97□□□□□ -1.13
VPS26B-204ENST00000527586 GOLGA8CPA6NN73 597 aa7.96□□□□□ -1.14
VPS26B-204ENST00000527586 TNFRSF10BO14763 440 aa7.96□□□□□ -1.14
VPS26B-204ENST00000527586 OPLAHO14841 1288 aa7.96□□□□□ -1.14
VPS26B-204ENST00000527586 RHOP08100 348 aa7.96□□□□□ -1.14
VPS26B-204ENST00000527586 SLC3A2P08195 630 aaKnown RBP7.96□□□□□ -1.14
VPS26B-204ENST00000527586 GOLGA8HP0CJ92 632 aa7.96□□□□□ -1.14
VPS26B-204ENST00000527586 TOP1P11387 765 aaKnown RBP7.96□□□□□ -1.14
VPS26B-204ENST00000527586 TNFRSF8P28908 595 aa7.96□□□□□ -1.14
VPS26B-204ENST00000527586 VIPR2P41587 438 aa7.96□□□□□ -1.14
VPS26B-204ENST00000527586 NOVP48745 357 aa7.96□□□□□ -1.14
VPS26B-204ENST00000527586 NFKB2Q00653 900 aa7.96□□□□□ -1.14
VPS26B-204ENST00000527586 POLA2Q14181 598 aa7.96□□□□□ -1.14
VPS26B-204ENST00000527586 FCHSD1Q86WN1 690 aa7.96□□□□□ -1.14
VPS26B-204ENST00000527586 RNF168Q8IYW5 571 aaPredicted RBP7.96□□□□□ -1.14
VPS26B-204ENST00000527586 SNIP1Q8TAD8 396 aaKnown RBP7.96□□□□□ -1.14
VPS26B-204ENST00000527586 ASB16Q96NS5 453 aa7.96□□□□□ -1.14
VPS26B-204ENST00000527586 FAM193BQ96PV7 902 aaPredicted RBP7.96□□□□□ -1.14
VPS26B-204ENST00000527586 PCYT2Q99447 389 aa7.96□□□□□ -1.14
VPS26B-204ENST00000527586 TMEM47Q9BQJ4 181 aa7.96□□□□□ -1.14
VPS26B-204ENST00000527586 TPSD1Q9BZJ3 242 aa7.96□□□□□ -1.14
VPS26B-204ENST00000527586 CPNE5Q9HCH3 593 aa7.96□□□□□ -1.14
VPS26B-204ENST00000527586 CHST7Q9NS84 486 aa7.96□□□□□ -1.14
VPS26B-204ENST00000527586 PAG1Q9NWQ8 432 aa7.96□□□□□ -1.14
VPS26B-204ENST00000527586 TOR4AQ9NXH8 423 aa7.96□□□□□ -1.14
VPS26B-204ENST00000527586 AK5Q9Y6K8 562 aa7.96□□□□□ -1.14
VPS26B-204ENST00000527586 PTPRBP23467 1997 aa7.96□□□□□ -1.14
VPS26B-204ENST00000527586 SPTBN1Q01082 2364 aaKnown RBP7.96□□□□□ -1.14
VPS26B-204ENST00000527586 CLEC18AA5D8T8 446 aa7.95□□□□□ -1.14
VPS26B-204ENST00000527586 MEIS3P2A8K0S8 358 aa7.95□□□□□ -1.14
VPS26B-204ENST00000527586 CBFA2T3O75081 653 aa7.95□□□□□ -1.14
VPS26B-204ENST00000527586 STAM2O75886 525 aa7.95□□□□□ -1.14
VPS26B-204ENST00000527586 VTNP04004 478 aa7.95□□□□□ -1.14
VPS26B-204ENST00000527586 APPP05067 770 aa7.95□□□□□ -1.14
VPS26B-204ENST00000527586 POU2F2P09086 479 aa7.95□□□□□ -1.14
VPS26B-204ENST00000527586 ATXN1LP0C7T5 689 aaKnown RBP7.95□□□□□ -1.14
VPS26B-204ENST00000527586 PTGER3P43115 390 aa7.95□□□□□ -1.14
VPS26B-204ENST00000527586 PHKA2P46019 1235 aa7.95□□□□□ -1.14
VPS26B-204ENST00000527586 GHRHRQ02643 423 aa7.95□□□□□ -1.14
VPS26B-204ENST00000527586 QRICH1Q2TAL8 776 aa7.95□□□□□ -1.14
VPS26B-204ENST00000527586 CLEC18BQ6UXF7 455 aa7.95□□□□□ -1.14
VPS26B-204ENST00000527586 LPCAT2Q7L5N7 544 aa7.95□□□□□ -1.14
VPS26B-204ENST00000527586 MFSD6LQ8IWD5 586 aa7.95□□□□□ -1.14
VPS26B-204ENST00000527586 YAF2Q8IY57 180 aa7.95□□□□□ -1.14
VPS26B-204ENST00000527586 CLEC18CQ8NCF0 446 aa7.95□□□□□ -1.14
VPS26B-204ENST00000527586 SPRYD3Q8NCJ5 442 aa7.95□□□□□ -1.14
VPS26B-204ENST00000527586 GIMAP8Q8ND71 665 aaPredicted RBP7.95□□□□□ -1.14
VPS26B-204ENST00000527586 SLC7A14Q8TBB6 771 aa7.95□□□□□ -1.14
VPS26B-204ENST00000527586 URGCPQ8TCY9 931 aa7.95□□□□□ -1.14
VPS26B-204ENST00000527586 SMARCD2Q92925 531 aa7.95□□□□□ -1.14
VPS26B-204ENST00000527586 GAD1Q99259 594 aa7.95□□□□□ -1.14
VPS26B-204ENST00000527586 AZI2Q9H6S1 392 aa7.95□□□□□ -1.14
VPS26B-204ENST00000527586 DACT1Q9NYF0 836 aa7.95□□□□□ -1.14
VPS26B-204ENST00000527586 PCOLCE2Q9UKZ9 415 aa7.95□□□□□ -1.14
VPS26B-204ENST00000527586 EML5Q05BV3 1969 aa7.95□□□□□ -1.14
VPS26B-204ENST00000527586 NID2Q14112 1375 aa7.95□□□□□ -1.14
VPS26B-204ENST00000527586 F8P00451 2351 aa7.95□□□□□ -1.14
VPS26B-204ENST00000527586 CENPEQ02224 2701 aa7.94□□□□□ -1.14
VPS26B-204ENST00000527586 CACNA1DQ01668 2161 aa7.94□□□□□ -1.14
VPS26B-204ENST00000527586 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.94□□□□□ -1.14
VPS26B-204ENST00000527586 HEPACAM2A8MVW5 462 aa7.94□□□□□ -1.14
VPS26B-204ENST00000527586 ARHGAP33O14559 1287 aa7.94□□□□□ -1.14
VPS26B-204ENST00000527586 SUV39H1O43463 412 aa7.94□□□□□ -1.14
VPS26B-204ENST00000527586 RANBP6O60518 1105 aaKnown RBP7.94□□□□□ -1.14
VPS26B-204ENST00000527586 BCAR3O75815 825 aa7.94□□□□□ -1.14
VPS26B-204ENST00000527586 DKK1O94907 266 aa7.94□□□□□ -1.14
VPS26B-204ENST00000527586 EFEMP2O95967 443 aa7.94□□□□□ -1.14
VPS26B-204ENST00000527586 SERPINF2P08697 491 aa7.94□□□□□ -1.14
VPS26B-204ENST00000527586 FGFR4P22455 802 aa7.94□□□□□ -1.14
VPS26B-204ENST00000527586 OR1G1P47890 313 aa7.94□□□□□ -1.14
VPS26B-204ENST00000527586 TMPRSS3P57727 454 aa7.94□□□□□ -1.14
VPS26B-204ENST00000527586 CREMQ03060 361 aa7.94□□□□□ -1.14
VPS26B-204ENST00000527586 DUOXA1Q1HG43 343 aa7.94□□□□□ -1.14
VPS26B-204ENST00000527586 ADGRF4Q8IZF3 695 aa7.94□□□□□ -1.14
VPS26B-204ENST00000527586 DAGLBQ8NCG7 672 aa7.94□□□□□ -1.14
VPS26B-204ENST00000527586 CEP76Q8TAP6 659 aa7.94□□□□□ -1.14
VPS26B-204ENST00000527586 FGF11Q92914 225 aa7.94□□□□□ -1.14
VPS26B-204ENST00000527586 ZSWIM3Q96MP5 696 aa7.94□□□□□ -1.14
VPS26B-204ENST00000527586 CSRNP2Q9H175 543 aa7.94□□□□□ -1.14
VPS26B-204ENST00000527586 PRDM16Q9HAZ2 1276 aa7.94□□□□□ -1.14
VPS26B-204ENST00000527586 CAPN10Q9HC96 672 aa7.94□□□□□ -1.14
VPS26B-204ENST00000527586 MAP3K20Q9NYL2 800 aaKnown RBP7.94□□□□□ -1.14
VPS26B-204ENST00000527586 PLEKHB1Q9UF11 243 aaPredicted RBP7.94□□□□□ -1.14
VPS26B-204ENST00000527586 PILRBQ9UKJ0 227 aa7.94□□□□□ -1.14
VPS26B-204ENST00000527586 ABCA2Q9BZC7 2435 aa7.94□□□□□ -1.14
VPS26B-204ENST00000527586 NCANO14594 1321 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms