RNA–Protein interactions for RNA: ENST00000527142.5

SYVN1-208, Transcript of synoviolin 1, humanhuman

TSL 5

Gene SYVN1, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-208ENST00000527142 CCDC94Q9BW85 323 aaPredicted RBP11.8□□□□□ -0.52
SYVN1-208ENST00000527142 TARS2Q9BW92 718 aaKnown RBP11.8□□□□□ -0.52
SYVN1-208ENST00000527142 ST6GALNAC4Q9H4F1 302 aa11.8□□□□□ -0.52
SYVN1-208ENST00000527142 SNTG2Q9NY99 539 aa11.8□□□□□ -0.52
SYVN1-208ENST00000527142 USP20Q9Y2K6 914 aa11.8□□□□□ -0.52
SYVN1-208ENST00000527142 FAN1Q9Y2M0 1017 aa11.8□□□□□ -0.52
SYVN1-208ENST00000527142 PCDHGC5Q9Y5F6 944 aa11.8□□□□□ -0.52
SYVN1-208ENST00000527142 ATP6V1DQ9Y5K8 247 aa11.8□□□□□ -0.52
SYVN1-208ENST00000527142 C2orf71A6NGG8 1288 aa11.79□□□□□ -0.52
SYVN1-208ENST00000527142 NT5C1B-RDH14C9J2C7 533 aa11.79□□□□□ -0.52
SYVN1-208ENST00000527142 PTGESO14684 152 aa11.79□□□□□ -0.52
SYVN1-208ENST00000527142 NRP1O14786 923 aa11.79□□□□□ -0.52
SYVN1-208ENST00000527142 HNRNPDLO14979 420 aaKnown RBP11.79□□□□□ -0.52
SYVN1-208ENST00000527142 TRAK2O60296 914 aa11.79□□□□□ -0.52
SYVN1-208ENST00000527142 TBX10O75333 385 aa11.79□□□□□ -0.52
SYVN1-208ENST00000527142 PIGRP01833 764 aa11.79□□□□□ -0.52
SYVN1-208ENST00000527142 CTSAP10619 480 aa11.79□□□□□ -0.52
SYVN1-208ENST00000527142 LTBRP36941 435 aa11.79□□□□□ -0.52
SYVN1-208ENST00000527142 ME1P48163 572 aa11.79□□□□□ -0.52
SYVN1-208ENST00000527142 NDUFV1P49821 464 aa11.79□□□□□ -0.52
SYVN1-208ENST00000527142 YARSP54577 528 aaKnown RBP11.79□□□□□ -0.52
SYVN1-208ENST00000527142 MCL1Q07820 350 aa11.79□□□□□ -0.52
SYVN1-208ENST00000527142 KYAT1Q16773 422 aa11.79□□□□□ -0.52
SYVN1-208ENST00000527142 AXDND1Q5T1B0 1012 aaPredicted RBP11.79□□□□□ -0.52
SYVN1-208ENST00000527142 MAP4K3Q8IVH8 894 aa11.79□□□□□ -0.52
SYVN1-208ENST00000527142 HVCN1Q96D96 273 aa11.79□□□□□ -0.52
SYVN1-208ENST00000527142 BICD1Q96G01 975 aa11.79□□□□□ -0.52
SYVN1-208ENST00000527142 HERC2P3Q9BVR0 1158 aa11.79□□□□□ -0.52
SYVN1-208ENST00000527142 COLEC11Q9BWP8 271 aa11.79□□□□□ -0.52
SYVN1-208ENST00000527142 VN1R3Q9BXE9 311 aa11.79□□□□□ -0.52
SYVN1-208ENST00000527142 LRRC27Q9C0I9 530 aa11.79□□□□□ -0.52
SYVN1-208ENST00000527142 TNMDQ9H2S6 317 aa11.79□□□□□ -0.52
SYVN1-208ENST00000527142 MAGEF1Q9HAY2 307 aa11.79□□□□□ -0.52
SYVN1-208ENST00000527142 MARCH5Q9NX47 278 aa11.79□□□□□ -0.52
SYVN1-208ENST00000527142 KLK14Q9P0G3 267 aa11.79□□□□□ -0.52
SYVN1-208ENST00000527142 ANKFY1Q9P2R3 1169 aa11.79□□□□□ -0.52
SYVN1-208ENST00000527142 TBX20Q9UMR3 447 aa11.79□□□□□ -0.52
SYVN1-208ENST00000527142 GDAQ9Y2T3 454 aa11.79□□□□□ -0.52
SYVN1-208ENST00000527142 PRG3Q9Y2Y8 225 aaPredicted RBP11.79□□□□□ -0.52
SYVN1-208ENST00000527142 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.79□□□□□ -0.52
SYVN1-208ENST00000527142 A0A087X0B3 334 aa11.78□□□□□ -0.52
SYVN1-208ENST00000527142 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.78□□□□□ -0.52
SYVN1-208ENST00000527142 MYMKA6NI61 221 aa11.78□□□□□ -0.52
SYVN1-208ENST00000527142 HIDE1A8MVS5 230 aa11.78□□□□□ -0.52
SYVN1-208ENST00000527142 H3BQ06 376 aaPredicted RBP11.78□□□□□ -0.52
SYVN1-208ENST00000527142 CLDN3O15551 220 aa11.78□□□□□ -0.52
SYVN1-208ENST00000527142 GLP2RO95838 553 aa11.78□□□□□ -0.52
SYVN1-208ENST00000527142 EFEMP2O95967 443 aa11.78□□□□□ -0.52
SYVN1-208ENST00000527142 SOD2P04179 222 aa11.78□□□□□ -0.52
SYVN1-208ENST00000527142 THP07101 528 aa11.78□□□□□ -0.52
SYVN1-208ENST00000527142 HOXD11P31277 338 aaPredicted RBP11.78□□□□□ -0.52
SYVN1-208ENST00000527142 GTF2F1P35269 517 aaKnown RBP eCLIP11.78□□□□□ -0.52
SYVN1-208ENST00000527142 OR1G1P47890 313 aa11.78□□□□□ -0.52
SYVN1-208ENST00000527142 GTF2BQ00403 316 aa11.78□□□□□ -0.52
SYVN1-208ENST00000527142 DNM1Q05193 864 aaKnown RBP11.78□□□□□ -0.52
SYVN1-208ENST00000527142 COASYQ13057 564 aa11.78□□□□□ -0.52
SYVN1-208ENST00000527142 SMAD4Q13485 552 aaKnown RBP11.78□□□□□ -0.52
SYVN1-208ENST00000527142 HSP90AA2PQ14568 343 aaPredicted RBP11.78□□□□□ -0.52
SYVN1-208ENST00000527142 PTPN14Q15678 1187 aa11.78□□□□□ -0.52
SYVN1-208ENST00000527142 E2F4Q16254 413 aa11.78□□□□□ -0.52
SYVN1-208ENST00000527142 PTCRAQ6ISU1 281 aaPredicted RBP11.78□□□□□ -0.52
SYVN1-208ENST00000527142 SHC4Q6S5L8 630 aa11.78□□□□□ -0.52
SYVN1-208ENST00000527142 TMEM184AQ6ZMB5 413 aa11.78□□□□□ -0.52
SYVN1-208ENST00000527142 EP400NLQ6ZTU2 488 aa11.78□□□□□ -0.52
SYVN1-208ENST00000527142 RBM23Q86U06 439 aaKnown RBP11.78□□□□□ -0.52
SYVN1-208ENST00000527142 GPR65Q8IYL9 337 aa11.78□□□□□ -0.52
SYVN1-208ENST00000527142 RNF168Q8IYW5 571 aaPredicted RBP11.78□□□□□ -0.52
SYVN1-208ENST00000527142 IQUBQ8NA54 791 aa11.78□□□□□ -0.52
SYVN1-208ENST00000527142 DDX12PQ92771 950 aa11.78□□□□□ -0.52
SYVN1-208ENST00000527142 DNAJC19Q96DA6 116 aa11.78□□□□□ -0.52
SYVN1-208ENST00000527142 MSLNLQ96KJ4 702 aa11.78□□□□□ -0.52
SYVN1-208ENST00000527142 SNX27Q96L92 541 aa11.78□□□□□ -0.52
SYVN1-208ENST00000527142 PPP1R10Q96QC0 940 aaKnown RBP11.78□□□□□ -0.52
SYVN1-208ENST00000527142 FIZ1Q96SL8 496 aa11.78□□□□□ -0.52
SYVN1-208ENST00000527142 UHRF1Q96T88 793 aaPredicted RBP11.78□□□□□ -0.52
SYVN1-208ENST00000527142 PYM1Q9BRP8 204 aaKnown RBP11.78□□□□□ -0.52
SYVN1-208ENST00000527142 TCHPQ9BT92 498 aa11.78□□□□□ -0.52
SYVN1-208ENST00000527142 ZHX3Q9H4I2 956 aa11.78□□□□□ -0.52
SYVN1-208ENST00000527142 IGFLR1Q9H665 355 aa11.78□□□□□ -0.52
SYVN1-208ENST00000527142 OLFML3Q9NRN5 406 aa11.78□□□□□ -0.52
SYVN1-208ENST00000527142 SLC38A7Q9NVC3 462 aa11.78□□□□□ -0.52
SYVN1-208ENST00000527142 MIOSQ9NXC5 875 aa11.78□□□□□ -0.52
SYVN1-208ENST00000527142 RCOR1Q9UKL0 485 aa11.78□□□□□ -0.52
SYVN1-208ENST00000527142 SF3B1O75533 1304 aaKnown RBP eCLIP11.78□□□□□ -0.523e-6■■■■■ 47.8
SYVN1-208ENST00000527142 FRMD3A2A2Y4 597 aa11.77□□□□□ -0.53
SYVN1-208ENST00000527142 GRXCR2A6NFK2 248 aa11.77□□□□□ -0.53
SYVN1-208ENST00000527142 LINC01565O15544 149 aa11.77□□□□□ -0.53
SYVN1-208ENST00000527142 URODP06132 367 aa11.77□□□□□ -0.53
SYVN1-208ENST00000527142 KCNE1P15382 129 aa11.77□□□□□ -0.53
SYVN1-208ENST00000527142 HOXB8P17481 243 aaPredicted RBP11.77□□□□□ -0.53
SYVN1-208ENST00000527142 LIG4P49917 911 aa11.77□□□□□ -0.53
SYVN1-208ENST00000527142 KRT85P78386 507 aa11.77□□□□□ -0.53
SYVN1-208ENST00000527142 CREMQ03060 361 aa11.77□□□□□ -0.53
SYVN1-208ENST00000527142 ALCAMQ13740 583 aa11.77□□□□□ -0.53
SYVN1-208ENST00000527142 KCNC3Q14003 757 aa11.77□□□□□ -0.53
SYVN1-208ENST00000527142 NAB2Q15742 525 aa11.77□□□□□ -0.53
SYVN1-208ENST00000527142 FOXD4L6Q3SYB3 417 aaPredicted RBP11.77□□□□□ -0.53
SYVN1-208ENST00000527142 XKR4Q5GH76 650 aa11.77□□□□□ -0.53
SYVN1-208ENST00000527142 RESP18Q5W5W9 173 aa11.77□□□□□ -0.53
SYVN1-208ENST00000527142 CNNM4Q6P4Q7 775 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms