RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 PRKCEQ02156 737 aa18.91■□□□□ 0.62
USH1C-205ENST00000527020 SP4Q02446 784 aa18.91■□□□□ 0.62
USH1C-205ENST00000527020 BTBD6Q96KE9 485 aa18.91■□□□□ 0.62
USH1C-205ENST00000527020 TXLNGYQ9BZA5 131 aa18.91■□□□□ 0.62
USH1C-205ENST00000527020 TRIM31Q9BZY9 425 aa18.91■□□□□ 0.62
USH1C-205ENST00000527020 CYP26B1Q9NR63 512 aa18.91■□□□□ 0.62
USH1C-205ENST00000527020 PICK1Q9NRD5 415 aa18.91■□□□□ 0.62
USH1C-205ENST00000527020 ARHGAP28Q9P2N2 729 aa18.91■□□□□ 0.62
USH1C-205ENST00000527020 SLC9A2Q9UBY0 812 aa18.91■□□□□ 0.62
USH1C-205ENST00000527020 SEPT9Q9UHD8 586 aaPredicted RBP18.91■□□□□ 0.62
USH1C-205ENST00000527020 GOLGA6L10A0A0M3HER8 536 aa18.9■□□□□ 0.62
USH1C-205ENST00000527020 PPP2R5EQ16537 467 aa18.9■□□□□ 0.62
USH1C-205ENST00000527020 GPD1LQ8N335 351 aa18.9■□□□□ 0.62
USH1C-205ENST00000527020 UBL4BQ8N7F7 174 aa18.9■□□□□ 0.62
USH1C-205ENST00000527020 PRELID2Q8N945 189 aa18.9■□□□□ 0.62
USH1C-205ENST00000527020 MCPH1Q8NEM0 835 aa18.9■□□□□ 0.62
USH1C-205ENST00000527020 ERP44Q9BS26 406 aa18.9■□□□□ 0.62
USH1C-205ENST00000527020 NUP85Q9BW27 656 aa18.9■□□□□ 0.62
USH1C-205ENST00000527020 RABEP2Q9H5N1 569 aa18.9■□□□□ 0.62
USH1C-205ENST00000527020 ZDHHC18Q9NUE0 388 aa18.9■□□□□ 0.62
USH1C-205ENST00000527020 FZD9O00144 591 aa18.89■□□□□ 0.62
USH1C-205ENST00000527020 MYO1FO00160 1098 aa18.89■□□□□ 0.62
USH1C-205ENST00000527020 HNRNPDLO14979 420 aaKnown RBP18.89■□□□□ 0.62
USH1C-205ENST00000527020 ATP2A1O14983 1001 aa18.89■□□□□ 0.62
USH1C-205ENST00000527020 DLATP10515 647 aaKnown RBP18.89■□□□□ 0.62
USH1C-205ENST00000527020 GARTP22102 1010 aa18.89■□□□□ 0.62
USH1C-205ENST00000527020 CTNNA1P35221 906 aaKnown RBP18.89■□□□□ 0.62
USH1C-205ENST00000527020 PTGIRP43119 386 aa18.89■□□□□ 0.62
USH1C-205ENST00000527020 IRX5P78411 483 aaPredicted RBP18.89■□□□□ 0.62
USH1C-205ENST00000527020 SP2Q02086 613 aa18.89■□□□□ 0.62
USH1C-205ENST00000527020 BRDTQ58F21 947 aaPredicted RBP18.89■□□□□ 0.62
USH1C-205ENST00000527020 CATSPERGQ6ZRH7 1159 aa18.89■□□□□ 0.62
USH1C-205ENST00000527020 C15orf39Q6ZRI6 1047 aa18.89■□□□□ 0.62
USH1C-205ENST00000527020 ZNF564Q8TBZ8 553 aaPredicted RBP18.89■□□□□ 0.62
USH1C-205ENST00000527020 ZNF516Q92618 1163 aa18.89■□□□□ 0.62
USH1C-205ENST00000527020 PI4K2AQ9BTU6 479 aa18.89■□□□□ 0.62
USH1C-205ENST00000527020 RAB17Q9H0T7 212 aa18.89■□□□□ 0.62
USH1C-205ENST00000527020 UTRNP46939 3433 aa18.89■□□□□ 0.61
USH1C-205ENST00000527020 FAM187AA6NFU0 413 aa18.89■□□□□ 0.61
USH1C-205ENST00000527020 SPATA31C2B4DYI2 1134 aa18.89■□□□□ 0.61
USH1C-205ENST00000527020 TRIM66O15016 1216 aa18.89■□□□□ 0.61
USH1C-205ENST00000527020 DKC1O60832 514 aaKnown RBP eCLIP18.89■□□□□ 0.61
USH1C-205ENST00000527020 CALCAP01258 141 aa18.89■□□□□ 0.61
USH1C-205ENST00000527020 CTNNA2P26232 953 aa18.89■□□□□ 0.61
USH1C-205ENST00000527020 CLUL1Q15846 466 aa18.89■□□□□ 0.61
USH1C-205ENST00000527020 JAMLQ86YT9 394 aa18.89■□□□□ 0.61
USH1C-205ENST00000527020 BCAS4Q8TDM0 211 aa18.89■□□□□ 0.61
USH1C-205ENST00000527020 UBLCP1Q8WVY7 318 aaPredicted RBP18.89■□□□□ 0.61
USH1C-205ENST00000527020 ZNF653Q96CK0 615 aa18.89■□□□□ 0.61
USH1C-205ENST00000527020 C18orf8Q96DM3 657 aa18.89■□□□□ 0.61
USH1C-205ENST00000527020 FAM213AQ9BRX8 229 aa18.89■□□□□ 0.61
USH1C-205ENST00000527020 POLR3FQ9H1D9 316 aaPredicted RBP18.89■□□□□ 0.61
USH1C-205ENST00000527020 WNT8AQ9H1J5 351 aa18.89■□□□□ 0.61
USH1C-205ENST00000527020 ATP6V0A4Q9HBG4 840 aa18.89■□□□□ 0.61
USH1C-205ENST00000527020 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.89■□□□□ 0.61
USH1C-205ENST00000527020 GTF3C4Q9UKN8 822 aa18.89■□□□□ 0.61
USH1C-205ENST00000527020 PHF2O75151 1096 aa18.88■□□□□ 0.61
USH1C-205ENST00000527020 PPFIA2O75334 1257 aa18.88■□□□□ 0.61
USH1C-205ENST00000527020 PYGMP11217 842 aa18.88■□□□□ 0.61
USH1C-205ENST00000527020 ATP4AP20648 1035 aa18.88■□□□□ 0.61
USH1C-205ENST00000527020 CCT5P48643 541 aa18.88■□□□□ 0.61
USH1C-205ENST00000527020 PDE6CP51160 858 aa18.88■□□□□ 0.61
USH1C-205ENST00000527020 WNT7BP56706 349 aa18.88■□□□□ 0.61
USH1C-205ENST00000527020 GUCY1A3Q02108 690 aa18.88■□□□□ 0.61
USH1C-205ENST00000527020 ENPEPQ07075 957 aa18.88■□□□□ 0.61
USH1C-205ENST00000527020 DHX9Q08211 1270 aaKnown RBP18.88■□□□□ 0.61
USH1C-205ENST00000527020 MTMR3Q13615 1198 aa18.88■□□□□ 0.61
USH1C-205ENST00000527020 DHX34Q14147 1143 aaKnown RBP18.88■□□□□ 0.61
USH1C-205ENST00000527020 TTC27Q6P3X3 843 aa18.88■□□□□ 0.61
USH1C-205ENST00000527020 MORC4Q8TE76 937 aa18.88■□□□□ 0.61
USH1C-205ENST00000527020 ZNF526Q8TF50 670 aaPredicted RBP18.88■□□□□ 0.61
USH1C-205ENST00000527020 TEX13BQ9BXU2 312 aa18.88■□□□□ 0.61
USH1C-205ENST00000527020 ACAD9Q9H845 621 aa18.88■□□□□ 0.61
USH1C-205ENST00000527020 LRRC4CQ9HCJ2 640 aa18.88■□□□□ 0.61
USH1C-205ENST00000527020 SSC5DA1L4H1 1573 aa18.88■□□□□ 0.61
USH1C-205ENST00000527020 A6NNZ2 444 aa18.88■□□□□ 0.61
USH1C-205ENST00000527020 KIAA0391O15091 583 aaKnown RBP18.88■□□□□ 0.61
USH1C-205ENST00000527020 SKIDA1Q1XH10 827 aa18.88■□□□□ 0.61
USH1C-205ENST00000527020 TUBB8Q3ZCM7 444 aa18.88■□□□□ 0.61
USH1C-205ENST00000527020 ANGEL2Q5VTE6 544 aaKnown RBP18.88■□□□□ 0.61
USH1C-205ENST00000527020 TCRBV7S2A1N4TA0A589 114 aa18.87■□□□□ 0.61
USH1C-205ENST00000527020 C19orf81C9J6K1 198 aa18.87■□□□□ 0.61
USH1C-205ENST00000527020 SUPT20HL2P0C7V6 817 aa18.87■□□□□ 0.61
USH1C-205ENST00000527020 MYZAPP0CAP1 466 aa18.87■□□□□ 0.61
USH1C-205ENST00000527020 HSPA6P17066 643 aa18.87■□□□□ 0.61
USH1C-205ENST00000527020 GCNT1Q02742 428 aa18.87■□□□□ 0.61
USH1C-205ENST00000527020 SUPT20HL1Q3ZLR7 823 aa18.87■□□□□ 0.61
USH1C-205ENST00000527020 ACAD10Q6JQN1 1059 aa18.87■□□□□ 0.61
USH1C-205ENST00000527020 ZDHHC24Q6UX98 284 aa18.87■□□□□ 0.61
USH1C-205ENST00000527020 CDHR1Q96JP9 859 aa18.87■□□□□ 0.61
USH1C-205ENST00000527020 FMO2Q99518 471 aa18.87■□□□□ 0.61
USH1C-205ENST00000527020 PCYOX1Q9UHG3 505 aa18.87■□□□□ 0.61
USH1C-205ENST00000527020 FEZ2Q9UHY8 353 aaPredicted RBP18.87■□□□□ 0.61
USH1C-205ENST00000527020 POLR2AP24928 1970 aaKnown RBP18.87■□□□□ 0.61
USH1C-205ENST00000527020 SPDYE16A6NNV3 312 aaPredicted RBP18.86■□□□□ 0.61
USH1C-205ENST00000527020 DRG2P55039 364 aaKnown RBP18.86■□□□□ 0.61
USH1C-205ENST00000527020 CLDN10P78369 228 aa18.86■□□□□ 0.61
USH1C-205ENST00000527020 FSTL1Q12841 308 aa18.86■□□□□ 0.61
USH1C-205ENST00000527020 SIX1Q15475 284 aaPredicted RBP18.86■□□□□ 0.61
USH1C-205ENST00000527020 CLEC16AQ2KHT3 1053 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms