RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 FOXJ2Q9P0K8 574 aa4.13□□□□□ -1.75
ECHDC1-219ENST00000526299 LCHNA4D1U4 455 aa4.12□□□□□ -1.75
ECHDC1-219ENST00000526299 PPP1R12AO14974 1030 aaPredicted RBP4.12□□□□□ -1.75
ECHDC1-219ENST00000526299 PRAMEF4O60810 478 aa4.12□□□□□ -1.75
ECHDC1-219ENST00000526299 GAS7O60861 476 aa4.12□□□□□ -1.75
ECHDC1-219ENST00000526299 GPR15P49685 360 aa4.12□□□□□ -1.75
ECHDC1-219ENST00000526299 CACNA2D1P54289 1103 aa4.12□□□□□ -1.75
ECHDC1-219ENST00000526299 MAPK7Q13164 816 aa4.12□□□□□ -1.75
ECHDC1-219ENST00000526299 SOGA3Q5TF21 947 aa4.12□□□□□ -1.75
ECHDC1-219ENST00000526299 Q8N9P0 234 aaPredicted RBP4.12□□□□□ -1.75
ECHDC1-219ENST00000526299 CHTF18Q8WVB6 975 aa4.12□□□□□ -1.75
ECHDC1-219ENST00000526299 ARMC5Q96C12 935 aa4.12□□□□□ -1.75
ECHDC1-219ENST00000526299 CEP95Q96GE4 821 aa4.12□□□□□ -1.75
ECHDC1-219ENST00000526299 ANO3Q9BYT9 981 aa4.12□□□□□ -1.75
ECHDC1-219ENST00000526299 THG1LQ9NWX6 298 aaKnown RBP4.12□□□□□ -1.75
ECHDC1-219ENST00000526299 DRGXA6NNA5 263 aa4.11□□□□□ -1.75
ECHDC1-219ENST00000526299 IKBKBO14920 756 aa4.11□□□□□ -1.75
ECHDC1-219ENST00000526299 ITGA10O75578 1167 aa4.11□□□□□ -1.75
ECHDC1-219ENST00000526299 LTA4HP09960 611 aaKnown RBP4.11□□□□□ -1.75
ECHDC1-219ENST00000526299 NEK4P51957 841 aa4.11□□□□□ -1.75
ECHDC1-219ENST00000526299 AGAP9Q5VTM2 703 aa4.11□□□□□ -1.75
ECHDC1-219ENST00000526299 B3GNTL1Q67FW5 361 aaPredicted RBP4.11□□□□□ -1.75
ECHDC1-219ENST00000526299 KRTAP5-11Q6L8G4 156 aa4.11□□□□□ -1.75
ECHDC1-219ENST00000526299 ARMC6Q6NXE6 501 aa4.11□□□□□ -1.75
ECHDC1-219ENST00000526299 ABHD15Q6UXT9 468 aa4.11□□□□□ -1.75
ECHDC1-219ENST00000526299 MAPKAPK5Q8IW41 473 aa4.11□□□□□ -1.75
ECHDC1-219ENST00000526299 TMEM132CQ8N3T6 1108 aa4.11□□□□□ -1.75
ECHDC1-219ENST00000526299 OR56A1Q8NGH5 318 aa4.11□□□□□ -1.75
ECHDC1-219ENST00000526299 ALOXE3Q9BYJ1 711 aa4.11□□□□□ -1.75
ECHDC1-219ENST00000526299 KRTAP1-5Q9BYS1 174 aa4.11□□□□□ -1.75
ECHDC1-219ENST00000526299 ATP11BQ9Y2G3 1177 aa4.11□□□□□ -1.75
ECHDC1-219ENST00000526299 E9PSI1 815 aa4.1□□□□□ -1.75
ECHDC1-219ENST00000526299 TGM5O43548 720 aa4.1□□□□□ -1.75
ECHDC1-219ENST00000526299 F2P00734 622 aa4.1□□□□□ -1.75
ECHDC1-219ENST00000526299 CANXP27824 592 aaKnown RBP4.1□□□□□ -1.75
ECHDC1-219ENST00000526299 PROK1P58294 105 aa4.1□□□□□ -1.75
ECHDC1-219ENST00000526299 MRPS35P82673 323 aaKnown RBP4.1□□□□□ -1.75
ECHDC1-219ENST00000526299 PPARAQ07869 468 aa4.1□□□□□ -1.75
ECHDC1-219ENST00000526299 SQSTM1Q13501 440 aa4.1□□□□□ -1.75
ECHDC1-219ENST00000526299 SPDYE7PQ495Y7 208 aa4.1□□□□□ -1.75
ECHDC1-219ENST00000526299 CCDC178Q5BJE1 867 aa4.1□□□□□ -1.75
ECHDC1-219ENST00000526299 MFSD14BQ5SR56 506 aa4.1□□□□□ -1.75
ECHDC1-219ENST00000526299 TSHZ3Q63HK5 1081 aa4.1□□□□□ -1.75
ECHDC1-219ENST00000526299 EFHBQ8N7U6 833 aa4.1□□□□□ -1.75
ECHDC1-219ENST00000526299 ZFP28Q8NHY6 868 aa4.1□□□□□ -1.75
ECHDC1-219ENST00000526299 SLC35B2Q8TB61 432 aa4.1□□□□□ -1.75
ECHDC1-219ENST00000526299 PDLIM2Q96JY6 352 aa4.1□□□□□ -1.75
ECHDC1-219ENST00000526299 CASS4Q9NQ75 786 aa4.1□□□□□ -1.75
ECHDC1-219ENST00000526299 IL17RBQ9NRM6 502 aa4.1□□□□□ -1.75
ECHDC1-219ENST00000526299 KLHL11Q9NVR0 708 aa4.1□□□□□ -1.75
ECHDC1-219ENST00000526299 ASB6Q9NWX5 421 aa4.1□□□□□ -1.75
ECHDC1-219ENST00000526299 LRIT1Q9P2V4 623 aa4.1□□□□□ -1.75
ECHDC1-219ENST00000526299 EVLQ9UI08 416 aaPredicted RBP4.1□□□□□ -1.75
ECHDC1-219ENST00000526299 PRSS50Q9UI38 385 aa4.1□□□□□ -1.75
ECHDC1-219ENST00000526299 KCNG1Q9UIX4 513 aa4.1□□□□□ -1.75
ECHDC1-219ENST00000526299 NOX1Q9Y5S8 564 aa4.1□□□□□ -1.75
ECHDC1-219ENST00000526299 NUMBLQ9Y6R0 609 aa4.1□□□□□ -1.75
ECHDC1-219ENST00000526299 WDR91A4D1P6 747 aa4.09□□□□□ -1.75
ECHDC1-219ENST00000526299 ZNF891A8MT65 544 aaPredicted RBP4.09□□□□□ -1.75
ECHDC1-219ENST00000526299 KPNA6O60684 536 aa4.09□□□□□ -1.75
ECHDC1-219ENST00000526299 PROP1O75360 226 aa4.09□□□□□ -1.75
ECHDC1-219ENST00000526299 KPNA1P52294 538 aaPredicted RBP4.09□□□□□ -1.75
ECHDC1-219ENST00000526299 PABPC4Q13310 644 aaKnown RBP eCLIP4.09□□□□□ -1.75
ECHDC1-219ENST00000526299 C19orf54Q5BKX5 351 aa4.09□□□□□ -1.75
ECHDC1-219ENST00000526299 ZNF788Q6ZQV5 615 aa4.09□□□□□ -1.75
ECHDC1-219ENST00000526299 KIF18BQ86Y91 864 aa4.09□□□□□ -1.75
ECHDC1-219ENST00000526299 GLB1L2Q8IW92 636 aa4.09□□□□□ -1.75
ECHDC1-219ENST00000526299 RHOT2Q8IXI1 618 aa4.09□□□□□ -1.75
ECHDC1-219ENST00000526299 ACTRT2Q8TDY3 377 aa4.09□□□□□ -1.75
ECHDC1-219ENST00000526299 SNX33Q8WV41 574 aa4.09□□□□□ -1.75
ECHDC1-219ENST00000526299 ZSWIM1Q9BR11 485 aa4.09□□□□□ -1.75
ECHDC1-219ENST00000526299 MS4A5Q9H3V2 200 aa4.09□□□□□ -1.75
ECHDC1-219ENST00000526299 KMT5AQ9NQR1 393 aa4.09□□□□□ -1.75
ECHDC1-219ENST00000526299 GPRC5DQ9NZD1 345 aa4.09□□□□□ -1.75
ECHDC1-219ENST00000526299 TMPRSS11EQ9UL52 423 aa4.09□□□□□ -1.75
ECHDC1-219ENST00000526299 TMEM127O75204 238 aa4.08□□□□□ -1.76
ECHDC1-219ENST00000526299 ASMTLO95671 621 aa4.08□□□□□ -1.76
ECHDC1-219ENST00000526299 LSP1P33241 339 aa4.08□□□□□ -1.76
ECHDC1-219ENST00000526299 DSG1Q02413 1049 aa4.08□□□□□ -1.76
ECHDC1-219ENST00000526299 C21orf62-AS1Q17RA5 79 aa4.08□□□□□ -1.76
ECHDC1-219ENST00000526299 PRAMEF14Q5SWL7 426 aa4.08□□□□□ -1.76
ECHDC1-219ENST00000526299 ATXN7L2Q5T6C5 722 aaPredicted RBP4.08□□□□□ -1.76
ECHDC1-219ENST00000526299 ZNF425Q6IV72 752 aa4.08□□□□□ -1.76
ECHDC1-219ENST00000526299 PDZD4Q76G19 769 aaPredicted RBP4.08□□□□□ -1.76
ECHDC1-219ENST00000526299 DDB2Q92466 427 aa4.08□□□□□ -1.76
ECHDC1-219ENST00000526299 FUBP1Q96AE4 644 aaKnown RBP4.08□□□□□ -1.76
ECHDC1-219ENST00000526299 RNF31Q96EP0 1072 aa4.08□□□□□ -1.76
ECHDC1-219ENST00000526299 GPR101Q96P66 508 aaPredicted RBP4.08□□□□□ -1.76
ECHDC1-219ENST00000526299 ORAI3Q9BRQ5 295 aa4.08□□□□□ -1.76
ECHDC1-219ENST00000526299 TBCCD1Q9NVR7 557 aa4.08□□□□□ -1.76
ECHDC1-219ENST00000526299 SLC17A6Q9P2U8 582 aa4.08□□□□□ -1.76
ECHDC1-219ENST00000526299 MAGEC2Q9UBF1 373 aaPredicted RBP4.08□□□□□ -1.76
ECHDC1-219ENST00000526299 ARPP21Q9UBL0 812 aaPredicted RBP4.08□□□□□ -1.76
ECHDC1-219ENST00000526299 ZNF70Q9UC06 446 aaPredicted RBP4.08□□□□□ -1.76
ECHDC1-219ENST00000526299 CCDC78A2IDD5 438 aa4.07□□□□□ -1.76
ECHDC1-219ENST00000526299 WIPF3A6NGB9 483 aa4.07□□□□□ -1.76
ECHDC1-219ENST00000526299 RFPL3O75679 317 aa4.07□□□□□ -1.76
ECHDC1-219ENST00000526299 ZFPL1O95159 310 aa4.07□□□□□ -1.76
ECHDC1-219ENST00000526299 GASTP01350 101 aa4.07□□□□□ -1.76
ECHDC1-219ENST00000526299 PTPN7P35236 360 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms