RNA–Protein interactions for RNA: ENST00000526117.5

LMX1B-203, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-203ENST00000526117 UBE4BO95155 1302 aa18.89■□□□□ 0.61
LMX1B-203ENST00000526117 REV3LO60673 3130 aa18.89■□□□□ 0.61
LMX1B-203ENST00000526117 RFXAPO00287 272 aa18.88■□□□□ 0.61
LMX1B-203ENST00000526117 FAM189A1O60320 539 aa18.88■□□□□ 0.61
LMX1B-203ENST00000526117 GCNT3O95395 438 aa18.88■□□□□ 0.61
LMX1B-203ENST00000526117 ITGB1P05556 798 aa18.88■□□□□ 0.61
LMX1B-203ENST00000526117 AFMP43652 599 aa18.88■□□□□ 0.61
LMX1B-203ENST00000526117 ALDH7A1P49419 539 aaKnown RBP18.88■□□□□ 0.61
LMX1B-203ENST00000526117 AFF1P51825 1210 aaKnown RBP18.88■□□□□ 0.61
LMX1B-203ENST00000526117 CASP5P51878 434 aa18.88■□□□□ 0.61
LMX1B-203ENST00000526117 BCAR1P56945 870 aa18.88■□□□□ 0.61
LMX1B-203ENST00000526117 RNASELQ05823 741 aaKnown RBP18.88■□□□□ 0.61
LMX1B-203ENST00000526117 SNW1Q13573 536 aaKnown RBP18.88■□□□□ 0.61
LMX1B-203ENST00000526117 FAM26FQ5R3K3 315 aa18.88■□□□□ 0.61
LMX1B-203ENST00000526117 SPOUT1Q5T280 376 aaKnown RBP18.88■□□□□ 0.61
LMX1B-203ENST00000526117 SLC39A4Q6P5W5 647 aa18.88■□□□□ 0.61
LMX1B-203ENST00000526117 ELOA2Q8IYF1 753 aaPredicted RBP18.88■□□□□ 0.61
LMX1B-203ENST00000526117 SLC39A11Q8N1S5 342 aa18.88■□□□□ 0.61
LMX1B-203ENST00000526117 SPPL3Q8TCT6 385 aa18.88■□□□□ 0.61
LMX1B-203ENST00000526117 ZBTB45Q96K62 511 aaPredicted RBP18.88■□□□□ 0.61
LMX1B-203ENST00000526117 ZFP42Q96MM3 310 aa18.88■□□□□ 0.61
LMX1B-203ENST00000526117 TIGD1Q96MW7 591 aa18.88■□□□□ 0.61
LMX1B-203ENST00000526117 ACCSQ96QU6 501 aa18.88■□□□□ 0.61
LMX1B-203ENST00000526117 TCHPQ9BT92 498 aa18.88■□□□□ 0.61
LMX1B-203ENST00000526117 HAPLN2Q9GZV7 340 aa18.88■□□□□ 0.61
LMX1B-203ENST00000526117 TMEM206Q9H813 350 aa18.88■□□□□ 0.61
LMX1B-203ENST00000526117 SPG21Q9NZD8 308 aa18.88■□□□□ 0.61
LMX1B-203ENST00000526117 PARP2Q9UGN5 583 aa18.88■□□□□ 0.61
LMX1B-203ENST00000526117 PTGESO14684 152 aa18.87■□□□□ 0.61
LMX1B-203ENST00000526117 OGTO15294 1046 aa18.87■□□□□ 0.61
LMX1B-203ENST00000526117 KLRC4O43908 158 aa18.87■□□□□ 0.61
LMX1B-203ENST00000526117 FGF18O76093 207 aa18.87■□□□□ 0.61
LMX1B-203ENST00000526117 GALTP07902 379 aa18.87■□□□□ 0.61
LMX1B-203ENST00000526117 SCNN1GP51170 649 aa18.87■□□□□ 0.61
LMX1B-203ENST00000526117 YARSP54577 528 aaKnown RBP18.87■□□□□ 0.61
LMX1B-203ENST00000526117 PSMD2Q13200 908 aa18.87■□□□□ 0.61
LMX1B-203ENST00000526117 BMT2Q1RMZ1 405 aa18.87■□□□□ 0.61
LMX1B-203ENST00000526117 PDE12Q6L8Q7 609 aaKnown RBP18.87■□□□□ 0.61
LMX1B-203ENST00000526117 ZNF280BQ86YH2 543 aa18.87■□□□□ 0.61
LMX1B-203ENST00000526117 COLGALT2Q8IYK4 626 aa18.87■□□□□ 0.61
LMX1B-203ENST00000526117 ACAP3Q96P50 834 aa18.87■□□□□ 0.61
LMX1B-203ENST00000526117 RPS6KC1Q96S38 1066 aa18.87■□□□□ 0.61
LMX1B-203ENST00000526117 TSPAN18Q96SJ8 248 aa18.87■□□□□ 0.61
LMX1B-203ENST00000526117 APOL6Q9BWW8 343 aa18.87■□□□□ 0.61
LMX1B-203ENST00000526117 PLEKHA5Q9HAU0 1116 aa18.87■□□□□ 0.61
LMX1B-203ENST00000526117 ANKFY1Q9P2R3 1169 aa18.87■□□□□ 0.61
LMX1B-203ENST00000526117 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.87■□□□□ 0.61
LMX1B-203ENST00000526117 TDRD15B5MCY1 1934 aaKnown RBP18.86■□□□□ 0.61
LMX1B-203ENST00000526117 B4GALT3O60512 393 aa18.86■□□□□ 0.61
LMX1B-203ENST00000526117 ZC3H11AO75152 810 aaKnown RBP eCLIP18.86■□□□□ 0.61
LMX1B-203ENST00000526117 DDHD2O94830 711 aa18.86■□□□□ 0.61
LMX1B-203ENST00000526117 POMCP01189 267 aa18.86■□□□□ 0.61
LMX1B-203ENST00000526117 ADRB2P07550 413 aa18.86■□□□□ 0.61
LMX1B-203ENST00000526117 CLTAP09496 248 aa18.86■□□□□ 0.61
LMX1B-203ENST00000526117 MYBP10242 640 aa18.86■□□□□ 0.61
LMX1B-203ENST00000526117 KCNE1P15382 129 aa18.86■□□□□ 0.61
LMX1B-203ENST00000526117 SNRPFP62306 86 aaKnown RBP18.86■□□□□ 0.61
LMX1B-203ENST00000526117 POSTNQ15063 836 aa18.86■□□□□ 0.61
LMX1B-203ENST00000526117 NAB2Q15742 525 aa18.86■□□□□ 0.61
LMX1B-203ENST00000526117 TIGD5Q53EQ6 642 aa18.86■□□□□ 0.61
LMX1B-203ENST00000526117 THNSL1Q8IYQ7 743 aa18.86■□□□□ 0.61
LMX1B-203ENST00000526117 GRAMD1CQ8IYS0 662 aa18.86■□□□□ 0.61
LMX1B-203ENST00000526117 CEP120Q8N960 986 aa18.86■□□□□ 0.61
LMX1B-203ENST00000526117 ZNF507Q8TCN5 953 aa18.86■□□□□ 0.61
LMX1B-203ENST00000526117 SNX27Q96L92 541 aa18.86■□□□□ 0.61
LMX1B-203ENST00000526117 FAM193BQ96PV7 902 aaPredicted RBP18.86■□□□□ 0.61
LMX1B-203ENST00000526117 FGFBP2Q9BYJ0 223 aa18.86■□□□□ 0.61
LMX1B-203ENST00000526117 BLZF1Q9H2G9 400 aa18.86■□□□□ 0.61
LMX1B-203ENST00000526117 MIOSQ9NXC5 875 aa18.86■□□□□ 0.61
LMX1B-203ENST00000526117 CNTN3Q9P232 1028 aa18.86■□□□□ 0.61
LMX1B-203ENST00000526117 PLXNA4Q9HCM2 1894 aa18.86■□□□□ 0.61
LMX1B-203ENST00000526117 KIAA0391O15091 583 aaKnown RBP18.85■□□□□ 0.61
LMX1B-203ENST00000526117 GRM6O15303 877 aa18.85■□□□□ 0.61
LMX1B-203ENST00000526117 ALDH2P05091 517 aa18.85■□□□□ 0.61
LMX1B-203ENST00000526117 THP07101 528 aa18.85■□□□□ 0.61
LMX1B-203ENST00000526117 GARTP22102 1010 aa18.85■□□□□ 0.61
LMX1B-203ENST00000526117 IGFBP4P22692 258 aa18.85■□□□□ 0.61
LMX1B-203ENST00000526117 CASP1P29466 404 aa18.85■□□□□ 0.61
LMX1B-203ENST00000526117 SLC11A1P49279 550 aa18.85■□□□□ 0.61
LMX1B-203ENST00000526117 KRT17Q04695 432 aa18.85■□□□□ 0.61
LMX1B-203ENST00000526117 KCNA1Q09470 495 aa18.85■□□□□ 0.61
LMX1B-203ENST00000526117 DPYDQ12882 1025 aa18.85■□□□□ 0.61
LMX1B-203ENST00000526117 TUSC3Q13454 348 aa18.85■□□□□ 0.61
LMX1B-203ENST00000526117 CAMK1Q14012 370 aa18.85■□□□□ 0.61
LMX1B-203ENST00000526117 ZBTB33Q86T24 672 aa18.85■□□□□ 0.61
LMX1B-203ENST00000526117 MAFAQ8NHW3 353 aaPredicted RBP18.85■□□□□ 0.61
LMX1B-203ENST00000526117 IGSF21Q96ID5 467 aa18.85■□□□□ 0.61
LMX1B-203ENST00000526117 PPP1R10Q96QC0 940 aaKnown RBP18.85■□□□□ 0.61
LMX1B-203ENST00000526117 KLK14Q9P0G3 267 aa18.85■□□□□ 0.61
LMX1B-203ENST00000526117 TBC1D7Q9P0N9 293 aa18.85■□□□□ 0.61
LMX1B-203ENST00000526117 DNAJB4Q9UDY4 337 aa18.85■□□□□ 0.61
LMX1B-203ENST00000526117 GDAQ9Y2T3 454 aa18.85■□□□□ 0.61
LMX1B-203ENST00000526117 ANKRD63C9JTQ0 380 aa18.84■□□□□ 0.61
LMX1B-203ENST00000526117 NR1I2O75469 434 aa18.84■□□□□ 0.61
LMX1B-203ENST00000526117 RHOBTB3O94955 611 aa18.84■□□□□ 0.61
LMX1B-203ENST00000526117 EFEMP2O95967 443 aa18.84■□□□□ 0.61
LMX1B-203ENST00000526117 ADSSP30520 456 aa18.84■□□□□ 0.61
LMX1B-203ENST00000526117 KCNB1Q14721 858 aa18.84■□□□□ 0.61
LMX1B-203ENST00000526117 POF1BQ8WVV4 589 aa18.84■□□□□ 0.61
LMX1B-203ENST00000526117 MSTO1Q9BUK6 570 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms